RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 C9JQL5 133 aa4.48□□□□□ -1.69
SF3B1-206ENST00000462613 NXPH4O95158 308 aa4.48□□□□□ -1.69
SF3B1-206ENST00000462613 IGLC6P0CF74 106 aa4.48□□□□□ -1.69
SF3B1-206ENST00000462613 HOXA5P20719 270 aa4.48□□□□□ -1.69
SF3B1-206ENST00000462613 CTRLP40313 264 aa4.48□□□□□ -1.69
SF3B1-206ENST00000462613 FHL2Q14192 279 aa4.48□□□□□ -1.69
SF3B1-206ENST00000462613 TWIST1Q15672 202 aa4.48□□□□□ -1.69
SF3B1-206ENST00000462613 RNF212Q495C1 297 aa4.48□□□□□ -1.69
SF3B1-206ENST00000462613 LYZL1Q6UWQ5 148 aa4.48□□□□□ -1.69
SF3B1-206ENST00000462613 NEGR1Q7Z3B1 354 aa4.48□□□□□ -1.69
SF3B1-206ENST00000462613 OR10AG1Q8NH19 301 aa4.48□□□□□ -1.69
SF3B1-206ENST00000462613 ANAPC16Q96DE5 110 aa4.48□□□□□ -1.69
SF3B1-206ENST00000462613 NAT8BQ9UHF3 227 aa4.48□□□□□ -1.69
SF3B1-206ENST00000462613 TENM2Q9NT68 2774 aa4.48□□□□□ -1.69
SF3B1-206ENST00000462613 A0A087WWL8 130 aa4.47□□□□□ -1.69
SF3B1-206ENST00000462613 TRBV10-1A0A0K0K1A3 114 aa4.47□□□□□ -1.69
SF3B1-206ENST00000462613 LCE6AA0A183 80 aa4.47□□□□□ -1.69
SF3B1-206ENST00000462613 A0A1B0GUT8 65 aa4.47□□□□□ -1.69
SF3B1-206ENST00000462613 TMEM218A2RU14 115 aa4.47□□□□□ -1.69
SF3B1-206ENST00000462613 HIGD1CA8MV81 97 aa4.47□□□□□ -1.69
SF3B1-206ENST00000462613 K7EQD1 137 aa4.47□□□□□ -1.69
SF3B1-206ENST00000462613 S100A8P05109 93 aa4.47□□□□□ -1.69
SF3B1-206ENST00000462613 MGPP08493 103 aa4.47□□□□□ -1.69
SF3B1-206ENST00000462613 GYPEP15421 78 aa4.47□□□□□ -1.69
SF3B1-206ENST00000462613 GATA1P15976 413 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-206ENST00000462613 NTF3P20783 257 aa4.47□□□□□ -1.69
SF3B1-206ENST00000462613 FAM3BP58499 235 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-206ENST00000462613 RAB4BP61018 213 aa4.47□□□□□ -1.69
SF3B1-206ENST00000462613 RPL36AP83881 106 aaKnown RBP4.47□□□□□ -1.69
SF3B1-206ENST00000462613 RIGQ13278 110 aa4.47□□□□□ -1.69
SF3B1-206ENST00000462613 C14orf178Q8N769 122 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-206ENST00000462613 POM121L12Q8N7R1 296 aa4.47□□□□□ -1.69
SF3B1-206ENST00000462613 SLC25A29Q8N8R3 303 aa4.47□□□□□ -1.69
SF3B1-206ENST00000462613 LINC00476Q8WZB0 136 aa4.47□□□□□ -1.69
SF3B1-206ENST00000462613 RPL36ALQ969Q0 106 aaKnown RBP4.47□□□□□ -1.69
SF3B1-206ENST00000462613 PGLYRP4Q96LB8 373 aa4.47□□□□□ -1.69
SF3B1-206ENST00000462613 SEC11CQ9BY50 192 aa4.47□□□□□ -1.69
SF3B1-206ENST00000462613 DPH3P1Q9H4G8 78 aa4.47□□□□□ -1.69
SF3B1-206ENST00000462613 A0A096LPF7 62 aa4.46□□□□□ -1.7
SF3B1-206ENST00000462613 MUC21A0A0G2JKD1 596 aa4.46□□□□□ -1.7
SF3B1-206ENST00000462613 MUC21A0A140T8X8 626 aa4.46□□□□□ -1.7
SF3B1-206ENST00000462613 A0A1B0GW15 77 aa4.46□□□□□ -1.7
SF3B1-206ENST00000462613 FOXA3P55318 350 aaPredicted RBP4.46□□□□□ -1.7
SF3B1-206ENST00000462613 KCNIP4Q6PIL6 250 aa4.46□□□□□ -1.7
SF3B1-206ENST00000462613 VSIG2Q96IQ7 327 aa4.46□□□□□ -1.7
SF3B1-206ENST00000462613 CNFNQ9BYD5 112 aa4.46□□□□□ -1.7
SF3B1-206ENST00000462613 V9GYV3 84 aa4.46□□□□□ -1.7
SF3B1-206ENST00000462613 CRYGDP07320 174 aa4.45□□□□□ -1.7
SF3B1-206ENST00000462613 S100PP25815 95 aa4.45□□□□□ -1.7
SF3B1-206ENST00000462613 ATP6V0E2Q8NHE4 81 aa4.45□□□□□ -1.7
SF3B1-206ENST00000462613 GTSF1Q8WW33 167 aa4.45□□□□□ -1.7
SF3B1-206ENST00000462613 FRZBQ92765 325 aa4.45□□□□□ -1.7
SF3B1-206ENST00000462613 SAMD10Q9BYL1 202 aa4.45□□□□□ -1.7
SF3B1-206ENST00000462613 CTDSP1Q9GZU7 261 aa4.45□□□□□ -1.7
SF3B1-206ENST00000462613 JPT2Q9H910 190 aa4.45□□□□□ -1.7
SF3B1-206ENST00000462613 TNFRSF18Q9Y5U5 241 aa4.45□□□□□ -1.7
SF3B1-206ENST00000462613 TRBV7-3A0A075B6L6 115 aa4.44□□□□□ -1.7
SF3B1-206ENST00000462613 A0A087WWC5 75 aa4.44□□□□□ -1.7
SF3B1-206ENST00000462613 TRAV8-6A0A0B4J262 113 aa4.44□□□□□ -1.7
SF3B1-206ENST00000462613 SMIM27A0A1W2PRY6 76 aa4.44□□□□□ -1.7
SF3B1-206ENST00000462613 GAGE12JA6NER3 117 aa4.44□□□□□ -1.7
SF3B1-206ENST00000462613 SNAPINO95295 136 aa4.44□□□□□ -1.7
SF3B1-206ENST00000462613 PPP1R17O96001 155 aa4.44□□□□□ -1.7
SF3B1-206ENST00000462613 EVI2AP22794 236 aa4.44□□□□□ -1.7
SF3B1-206ENST00000462613 GAGE1Q13065 139 aa4.44□□□□□ -1.7
SF3B1-206ENST00000462613 GAGE4Q13068 117 aa4.44□□□□□ -1.7
SF3B1-206ENST00000462613 GAGE5Q13069 117 aa4.44□□□□□ -1.7
SF3B1-206ENST00000462613 GAGE13Q4V321 117 aa4.44□□□□□ -1.7
SF3B1-206ENST00000462613 TMEM97Q5BJF2 176 aa4.44□□□□□ -1.7
SF3B1-206ENST00000462613 ZNF575Q86XF7 245 aa4.44□□□□□ -1.7
SF3B1-206ENST00000462613 SVBPQ8N300 66 aa4.44□□□□□ -1.7
SF3B1-206ENST00000462613 NUP35Q8NFH5 326 aa4.44□□□□□ -1.7
SF3B1-206ENST00000462613 ZNRF2Q8NHG8 242 aa4.44□□□□□ -1.7
SF3B1-206ENST00000462613 BTF3L4Q96K17 158 aa4.44□□□□□ -1.7
SF3B1-206ENST00000462613 DNAJC30Q96LL9 226 aa4.44□□□□□ -1.7
SF3B1-206ENST00000462613 TMEM191AQ9H0A3 160 aa4.44□□□□□ -1.7
SF3B1-206ENST00000462613 MSRB1Q9NZV6 116 aa4.44□□□□□ -1.7
SF3B1-206ENST00000462613 TRAV9-2A0A087WT02 112 aa4.43□□□□□ -1.7
SF3B1-206ENST00000462613 APOC3P02656 99 aa4.43□□□□□ -1.7
SF3B1-206ENST00000462613 HBBP68871 147 aa4.43□□□□□ -1.7
SF3B1-206ENST00000462613 RHEBQ15382 184 aa4.43□□□□□ -1.7
SF3B1-206ENST00000462613 TTC32Q5I0X7 151 aa4.43□□□□□ -1.7
SF3B1-206ENST00000462613 OR10J3Q5JRS4 329 aa4.43□□□□□ -1.7
SF3B1-206ENST00000462613 UFSP1Q6NVU6 142 aa4.43□□□□□ -1.7
SF3B1-206ENST00000462613 RASL11AQ6T310 242 aa4.43□□□□□ -1.7
SF3B1-206ENST00000462613 ATP5L2Q7Z4Y8 100 aa4.43□□□□□ -1.7
SF3B1-206ENST00000462613 IMMP2LQ96T52 175 aa4.43□□□□□ -1.7
SF3B1-206ENST00000462613 GTSF1LQ9H1H1 148 aa4.43□□□□□ -1.7
SF3B1-206ENST00000462613 RPS10P5Q9NQ39 176 aa4.43□□□□□ -1.7
SF3B1-206ENST00000462613 CARHSP1Q9Y2V2 147 aaKnown RBP4.43□□□□□ -1.7
SF3B1-206ENST00000462613 MRPS16Q9Y3D3 137 aaKnown RBP4.43□□□□□ -1.7
SF3B1-206ENST00000462613 URGCP-MRPS24S4R325 110 aa4.43□□□□□ -1.7
SF3B1-206ENST00000462613 TRAV9-1A0A075B6T8 112 aa4.42□□□□□ -1.7
SF3B1-206ENST00000462613 LOC100131303A0A0U1RQF7 123 aa4.42□□□□□ -1.7
SF3B1-206ENST00000462613 K7EP13 123 aa4.42□□□□□ -1.7
SF3B1-206ENST00000462613 SIVA1O15304 175 aa4.42□□□□□ -1.7
SF3B1-206ENST00000462613 ADCYAP1P18509 176 aa4.42□□□□□ -1.7
SF3B1-206ENST00000462613 CAMPP49913 170 aa4.42□□□□□ -1.7
SF3B1-206ENST00000462613 TIRAPP58753 221 aa4.42□□□□□ -1.7
SF3B1-206ENST00000462613 PKIAP61925 76 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms