RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 LAGE3Q14657 143 aa12.04□□□□□ -0.48
MSH6-207ENST00000456246 GAGE13Q4V321 117 aa12.04□□□□□ -0.48
MSH6-207ENST00000456246 FAM74A4Q5TZK3 123 aa12.04□□□□□ -0.48
MSH6-207ENST00000456246 TCTE3Q8IZS6 198 aa12.04□□□□□ -0.48
MSH6-207ENST00000456246 MLST8Q9BVC4 326 aa12.04□□□□□ -0.48
MSH6-207ENST00000456246 SAMD10Q9BYL1 202 aa12.04□□□□□ -0.48
MSH6-207ENST00000456246 JPT2Q9H910 190 aa12.04□□□□□ -0.48
MSH6-207ENST00000456246 M0R381 172 aa12.03□□□□□ -0.48
MSH6-207ENST00000456246 PSCAO43653 123 aa12.03□□□□□ -0.48
MSH6-207ENST00000456246 TRBV10-1A0A0K0K1A3 114 aa12.02□□□□□ -0.49
MSH6-207ENST00000456246 MAPKAPK5-AS1Q8N8E1 139 aa12.02□□□□□ -0.49
MSH6-207ENST00000456246 C11orf52Q96A22 123 aa12.02□□□□□ -0.49
MSH6-207ENST00000456246 GNG13Q9P2W3 67 aa12.02□□□□□ -0.49
MSH6-207ENST00000456246 HSPG2P98160 4391 aa12.01□□□□□ -0.49
MSH6-207ENST00000456246 C14orf178Q8N769 122 aaPredicted RBP12.01□□□□□ -0.49
MSH6-207ENST00000456246 A0A087WWL8 130 aa12□□□□□ -0.49
MSH6-207ENST00000456246 IGHV3-30P01768 117 aa12□□□□□ -0.49
MSH6-207ENST00000456246 IGHV3-33P01772 117 aa12□□□□□ -0.49
MSH6-207ENST00000456246 IGHV3-30-3P0DP02 117 aa12□□□□□ -0.49
MSH6-207ENST00000456246 IGHV3-30-5P0DP03 117 aa12□□□□□ -0.49
MSH6-207ENST00000456246 RPL35P42766 123 aaKnown RBP12□□□□□ -0.49
MSH6-207ENST00000456246 SULT1A2P50226 295 aa12□□□□□ -0.49
MSH6-207ENST00000456246 TOR2AQ5JU69 321 aa12□□□□□ -0.49
MSH6-207ENST00000456246 IFNA1P01562 189 aa11.99□□□□□ -0.49
MSH6-207ENST00000456246 OR5AL1P0C617 328 aa11.99□□□□□ -0.49
MSH6-207ENST00000456246 RPL36AP83881 106 aaKnown RBP11.99□□□□□ -0.49
MSH6-207ENST00000456246 SLC51BQ86UW2 128 aa11.99□□□□□ -0.49
MSH6-207ENST00000456246 RPL36ALQ969Q0 106 aaKnown RBP11.99□□□□□ -0.49
MSH6-207ENST00000456246 SMIM12Q96EX1 92 aa11.99□□□□□ -0.49
MSH6-207ENST00000456246 TM2D2Q9BX73 214 aa11.99□□□□□ -0.49
MSH6-207ENST00000456246 SNAI2O43623 268 aa11.98□□□□□ -0.49
MSH6-207ENST00000456246 C1QBP02746 253 aa11.98□□□□□ -0.49
MSH6-207ENST00000456246 PRR27Q6MZM9 219 aa11.98□□□□□ -0.49
MSH6-207ENST00000456246 NTN5Q8WTR8 489 aaPredicted RBP11.98□□□□□ -0.49
MSH6-207ENST00000456246 SSBP4Q9BWG4 385 aaPredicted RBP11.98□□□□□ -0.49
MSH6-207ENST00000456246 Q9HAA7 133 aa11.98□□□□□ -0.49
MSH6-207ENST00000456246 TRAV8-3A0A0A6YYJ7 113 aa11.97□□□□□ -0.49
MSH6-207ENST00000456246 PDE6DO43924 150 aa11.97□□□□□ -0.49
MSH6-207ENST00000456246 CCL20P78556 96 aa11.97□□□□□ -0.49
MSH6-207ENST00000456246 RPL19P84098 196 aaKnown RBP11.97□□□□□ -0.49
MSH6-207ENST00000456246 SPANXN1Q5VSR9 72 aa11.97□□□□□ -0.49
MSH6-207ENST00000456246 Q8N1X5 172 aa11.97□□□□□ -0.49
MSH6-207ENST00000456246 OR10AG1Q8NH19 301 aa11.97□□□□□ -0.49
MSH6-207ENST00000456246 URGCP-MRPS24S4R325 110 aa11.97□□□□□ -0.49
MSH6-207ENST00000456246 DNAH5Q8TE73 4624 aa11.96□□□□□ -0.49
MSH6-207ENST00000456246 TRBV7-3A0A075B6L6 115 aa11.96□□□□□ -0.49
MSH6-207ENST00000456246 TAGLN2P37802 199 aaKnown RBP11.96□□□□□ -0.49
MSH6-207ENST00000456246 RAB4BP61018 213 aa11.96□□□□□ -0.49
MSH6-207ENST00000456246 MEF2BQ02080 365 aaPredicted RBP11.96□□□□□ -0.49
MSH6-207ENST00000456246 CHCHD7Q9BUK0 85 aa11.96□□□□□ -0.49
MSH6-207ENST00000456246 Q9UF83 564 aa11.96□□□□□ -0.49
MSH6-207ENST00000456246 LRCOL1A6NCL2 159 aa11.95□□□□□ -0.5
MSH6-207ENST00000456246 CENPWQ5EE01 88 aa11.95□□□□□ -0.5
MSH6-207ENST00000456246 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.95□□□□□ -0.5
MSH6-207ENST00000456246 OR10G8Q8NGN5 311 aa11.95□□□□□ -0.5
MSH6-207ENST00000456246 DERL1Q9BUN8 251 aa11.95□□□□□ -0.5
MSH6-207ENST00000456246 BIN3Q9NQY0 253 aa11.95□□□□□ -0.5
MSH6-207ENST00000456246 COX11Q9Y6N1 276 aa11.95□□□□□ -0.5
MSH6-207ENST00000456246 APOBP04114 4563 aaKnown RBP11.95□□□□□ -0.5
MSH6-207ENST00000456246 RPS20P60866 119 aaKnown RBP11.94□□□□□ -0.5
MSH6-207ENST00000456246 UBE2D3P61077 147 aa11.94□□□□□ -0.5
MSH6-207ENST00000456246 UBE2D2P62837 147 aa11.94□□□□□ -0.5
MSH6-207ENST00000456246 ZNF56Q15929 161 aa11.94□□□□□ -0.5
MSH6-207ENST00000456246 Q6ZNX1 250 aa11.94□□□□□ -0.5
MSH6-207ENST00000456246 DAZAP1Q96EP5 407 aaKnown RBP11.94□□□□□ -0.5
MSH6-207ENST00000456246 AP1S3Q96PC3 154 aa11.94□□□□□ -0.5
MSH6-207ENST00000456246 KRTAP4-5Q9BYR2 181 aa11.94□□□□□ -0.5
MSH6-207ENST00000456246 BCL2P10415 239 aa11.93□□□□□ -0.5
MSH6-207ENST00000456246 GCSHP23434 173 aa11.93□□□□□ -0.5
MSH6-207ENST00000456246 GNG4P50150 75 aa11.93□□□□□ -0.5
MSH6-207ENST00000456246 KCNIP4Q6PIL6 250 aa11.93□□□□□ -0.5
MSH6-207ENST00000456246 NIT1Q86X76 327 aa11.93□□□□□ -0.5
MSH6-207ENST00000456246 RMI2Q96E14 147 aa11.93□□□□□ -0.5
MSH6-207ENST00000456246 IGLV5-52A0A0A0MRZ9 124 aa11.92□□□□□ -0.5
MSH6-207ENST00000456246 XKRY2A2RUG3 117 aa11.92□□□□□ -0.5
MSH6-207ENST00000456246 SMIM17P0DL12 118 aa11.92□□□□□ -0.5
MSH6-207ENST00000456246 ELOBQ15370 118 aa11.92□□□□□ -0.5
MSH6-207ENST00000456246 DAZ4Q86SG3 579 aaKnown RBP11.92□□□□□ -0.5
MSH6-207ENST00000456246 AKAP14Q86UN6 197 aa11.92□□□□□ -0.5
MSH6-207ENST00000456246 Q8N814 137 aa11.92□□□□□ -0.5
MSH6-207ENST00000456246 DAZ3Q9NR90 486 aaKnown RBP11.92□□□□□ -0.5
MSH6-207ENST00000456246 VAX2Q9UIW0 290 aa11.92□□□□□ -0.5
MSH6-207ENST00000456246 A0A087WX48 190 aa11.91□□□□□ -0.5
MSH6-207ENST00000456246 FUSP35637 526 aaKnown RBP eCLIP11.91□□□□□ -0.5
MSH6-207ENST00000456246 Q8N3U1 123 aa11.91□□□□□ -0.5
MSH6-207ENST00000456246 MED9Q9NWA0 146 aa11.91□□□□□ -0.5
MSH6-207ENST00000456246 C19orf71A6NCJ1 209 aa11.9□□□□□ -0.5
MSH6-207ENST00000456246 IGLV2-8P01709 118 aa11.9□□□□□ -0.5
MSH6-207ENST00000456246 KRTAP10-1P60331 282 aa11.9□□□□□ -0.5
MSH6-207ENST00000456246 PKIAP61925 76 aa11.9□□□□□ -0.5
MSH6-207ENST00000456246 TMEM97Q5BJF2 176 aa11.9□□□□□ -0.5
MSH6-207ENST00000456246 FER1L6-AS1Q8NA97 138 aa11.9□□□□□ -0.5
MSH6-207ENST00000456246 OR2D3Q8NGH3 330 aa11.9□□□□□ -0.5
MSH6-207ENST00000456246 ABCA13Q86UQ4 5058 aa11.89□□□□□ -0.51
MSH6-207ENST00000456246 RBFOX3A6NFN3 312 aa11.89□□□□□ -0.51
MSH6-207ENST00000456246 F5H697 171 aa11.89□□□□□ -0.51
MSH6-207ENST00000456246 P01737 135 aa11.89□□□□□ -0.51
MSH6-207ENST00000456246 IGLC6P0CF74 106 aa11.89□□□□□ -0.51
MSH6-207ENST00000456246 CACNG7P62955 275 aa11.89□□□□□ -0.51
MSH6-207ENST00000456246 NEXN-AS1Q8NBZ9 246 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms