RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 SULT1A2P50226 295 aa14.31□□□□□ -0.12
HMGB3-205ENST00000455596 CCL20P78556 96 aa14.31□□□□□ -0.12
HMGB3-205ENST00000455596 PGPEP1Q9NXJ5 209 aa14.31□□□□□ -0.12
HMGB3-205ENST00000455596 A0A087WTM6 91 aa14.3□□□□□ -0.12
HMGB3-205ENST00000455596 A0A087WWL8 130 aa14.3□□□□□ -0.12
HMGB3-205ENST00000455596 IGHV3-30P01768 117 aa14.3□□□□□ -0.12
HMGB3-205ENST00000455596 IGHV3-33P01772 117 aa14.3□□□□□ -0.12
HMGB3-205ENST00000455596 C1QBP02746 253 aa14.3□□□□□ -0.12
HMGB3-205ENST00000455596 CXCL1P09341 107 aa14.3□□□□□ -0.12
HMGB3-205ENST00000455596 IGHV3-30-3P0DP02 117 aa14.3□□□□□ -0.12
HMGB3-205ENST00000455596 IGHV3-30-5P0DP03 117 aa14.3□□□□□ -0.12
HMGB3-205ENST00000455596 RPL19P84098 196 aaKnown RBP14.3□□□□□ -0.12
HMGB3-205ENST00000455596 IBA57-AS1B1ANH7 110 aa14.29□□□□□ -0.12
HMGB3-205ENST00000455596 RPL35P42766 123 aaKnown RBP14.29□□□□□ -0.12
HMGB3-205ENST00000455596 PRR27Q6MZM9 219 aa14.29□□□□□ -0.12
HMGB3-205ENST00000455596 Q6ZNX1 250 aa14.29□□□□□ -0.12
HMGB3-205ENST00000455596 C11orf52Q96A22 123 aa14.29□□□□□ -0.12
HMGB3-205ENST00000455596 Q9UF83 564 aa14.29□□□□□ -0.12
HMGB3-205ENST00000455596 CDPF1Q6NVV7 123 aa14.28□□□□□ -0.12
HMGB3-205ENST00000455596 SLC51BQ86UW2 128 aa14.28□□□□□ -0.12
HMGB3-205ENST00000455596 PSCAO43653 123 aa14.27□□□□□ -0.13
HMGB3-205ENST00000455596 DERL1Q9BUN8 251 aa14.27□□□□□ -0.13
HMGB3-205ENST00000455596 A0A087WWC5 75 aa14.26□□□□□ -0.13
HMGB3-205ENST00000455596 SNAI2O43623 268 aa14.25□□□□□ -0.13
HMGB3-205ENST00000455596 IFNA1P01562 189 aa14.25□□□□□ -0.13
HMGB3-205ENST00000455596 OR10AG1Q8NH19 301 aa14.25□□□□□ -0.13
HMGB3-205ENST00000455596 Q9HAA7 133 aa14.25□□□□□ -0.13
HMGB3-205ENST00000455596 OR5AL1P0C617 328 aa14.24□□□□□ -0.13
HMGB3-205ENST00000455596 FUSP35637 526 aaKnown RBP eCLIP14.24□□□□□ -0.13
HMGB3-205ENST00000455596 MEF2BQ02080 365 aaPredicted RBP14.24□□□□□ -0.13
HMGB3-205ENST00000455596 LAGE3Q14657 143 aa14.24□□□□□ -0.13
HMGB3-205ENST00000455596 CENPWQ5EE01 88 aa14.24□□□□□ -0.13
HMGB3-205ENST00000455596 MAPKAPK5-AS1Q8N8E1 139 aa14.24□□□□□ -0.13
HMGB3-205ENST00000455596 SSBP4Q9BWG4 385 aaPredicted RBP14.24□□□□□ -0.13
HMGB3-205ENST00000455596 TRBV10-1A0A0K0K1A3 114 aa14.23□□□□□ -0.13
HMGB3-205ENST00000455596 PDE6DO43924 150 aa14.23□□□□□ -0.13
HMGB3-205ENST00000455596 RPL36AP83881 106 aaKnown RBP14.23□□□□□ -0.13
HMGB3-205ENST00000455596 SPANXN1Q5VSR9 72 aa14.23□□□□□ -0.13
HMGB3-205ENST00000455596 AKAP14Q86UN6 197 aa14.23□□□□□ -0.13
HMGB3-205ENST00000455596 RPL36ALQ969Q0 106 aaKnown RBP14.23□□□□□ -0.13
HMGB3-205ENST00000455596 RAB4BP61018 213 aa14.22□□□□□ -0.13
HMGB3-205ENST00000455596 ZNF56Q15929 161 aa14.22□□□□□ -0.13
HMGB3-205ENST00000455596 SMIM12Q96EX1 92 aa14.22□□□□□ -0.13
HMGB3-205ENST00000455596 DAZAP1Q96EP5 407 aaKnown RBP14.21□□□□□ -0.13
HMGB3-205ENST00000455596 hCG_2014768A0A024R1R8 64 aa14.2□□□□□ -0.14
HMGB3-205ENST00000455596 TRBV7-3A0A075B6L6 115 aa14.2□□□□□ -0.14
HMGB3-205ENST00000455596 MUC21A0A0G2JKD1 596 aa14.2□□□□□ -0.14
HMGB3-205ENST00000455596 MUC21A0A140T8X8 626 aa14.2□□□□□ -0.14
HMGB3-205ENST00000455596 IGLV2-8P01709 118 aa14.2□□□□□ -0.14
HMGB3-205ENST00000455596 BCL2P10415 239 aa14.2□□□□□ -0.14
HMGB3-205ENST00000455596 GNG4P50150 75 aa14.2□□□□□ -0.14
HMGB3-205ENST00000455596 Q8N3U1 123 aa14.2□□□□□ -0.14
HMGB3-205ENST00000455596 KRTAP4-5Q9BYR2 181 aa14.2□□□□□ -0.14
HMGB3-205ENST00000455596 VAX2Q9UIW0 290 aa14.2□□□□□ -0.14
HMGB3-205ENST00000455596 RAB19A4D1S5 217 aa14.19□□□□□ -0.14
HMGB3-205ENST00000455596 LRCOL1A6NCL2 159 aa14.19□□□□□ -0.14
HMGB3-205ENST00000455596 UBE2D3P61077 147 aa14.19□□□□□ -0.14
HMGB3-205ENST00000455596 UBE2D2P62837 147 aa14.19□□□□□ -0.14
HMGB3-205ENST00000455596 TOR2AQ5JU69 321 aa14.19□□□□□ -0.14
HMGB3-205ENST00000455596 DAZ4Q86SG3 579 aaKnown RBP14.19□□□□□ -0.14
HMGB3-205ENST00000455596 DAZ3Q9NR90 486 aaKnown RBP14.19□□□□□ -0.14
HMGB3-205ENST00000455596 MED9Q9NWA0 146 aa14.19□□□□□ -0.14
HMGB3-205ENST00000455596 URGCP-MRPS24S4R325 110 aa14.19□□□□□ -0.14
HMGB3-205ENST00000455596 TRAV8-3A0A0A6YYJ7 113 aa14.18□□□□□ -0.14
HMGB3-205ENST00000455596 TAGLN2P37802 199 aaKnown RBP14.18□□□□□ -0.14
HMGB3-205ENST00000455596 RPS20P60866 119 aaKnown RBP14.18□□□□□ -0.14
HMGB3-205ENST00000455596 SSTP61278 116 aa14.18□□□□□ -0.14
HMGB3-205ENST00000455596 C9orf62Q8N4C0 152 aa14.18□□□□□ -0.14
HMGB3-205ENST00000455596 OR10G8Q8NGN5 311 aa14.18□□□□□ -0.14
HMGB3-205ENST00000455596 TM2D2Q9BX73 214 aa14.18□□□□□ -0.14
HMGB3-205ENST00000455596 C19orf71A6NCJ1 209 aa14.17□□□□□ -0.14
HMGB3-205ENST00000455596 NIT1Q86X76 327 aa14.17□□□□□ -0.14
HMGB3-205ENST00000455596 OR2D3Q8NGH3 330 aa14.17□□□□□ -0.14
HMGB3-205ENST00000455596 BIN3Q9NQY0 253 aa14.17□□□□□ -0.14
HMGB3-205ENST00000455596 RYR1P21817 5038 aa14.16□□□□□ -0.14
HMGB3-205ENST00000455596 F5H697 171 aa14.16□□□□□ -0.14
HMGB3-205ENST00000455596 SMIM17P0DL12 118 aa14.16□□□□□ -0.14
HMGB3-205ENST00000455596 Q8N1X5 172 aa14.16□□□□□ -0.14
HMGB3-205ENST00000455596 FER1L6-AS1Q8NA97 138 aa14.16□□□□□ -0.14
HMGB3-205ENST00000455596 NEXN-AS1Q8NBZ9 246 aa14.16□□□□□ -0.14
HMGB3-205ENST00000455596 AP1S3Q96PC3 154 aa14.16□□□□□ -0.14
HMGB3-205ENST00000455596 TRBV20OR9-2A0A075B6H5 130 aa14.15□□□□□ -0.14
HMGB3-205ENST00000455596 IGLC6P0CF74 106 aa14.15□□□□□ -0.14
HMGB3-205ENST00000455596 GZMBP10144 247 aa14.15□□□□□ -0.14
HMGB3-205ENST00000455596 TPPP3Q9BW30 176 aa14.15□□□□□ -0.14
HMGB3-205ENST00000455596 XKRY2A2RUG3 117 aa14.14□□□□□ -0.15
HMGB3-205ENST00000455596 P01737 135 aa14.14□□□□□ -0.15
HMGB3-205ENST00000455596 GCSHP23434 173 aa14.14□□□□□ -0.15
HMGB3-205ENST00000455596 Q8N814 137 aa14.14□□□□□ -0.15
HMGB3-205ENST00000455596 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.14□□□□□ -0.15
HMGB3-205ENST00000455596 NTN5Q8WTR8 489 aaPredicted RBP14.14□□□□□ -0.15
HMGB3-205ENST00000455596 PCLOQ9Y6V0 5065 aa14.14□□□□□ -0.15
HMGB3-205ENST00000455596 LRP1BQ9NZR2 4599 aa14.14□□□□□ -0.15
HMGB3-205ENST00000455596 IGLV5-52A0A0A0MRZ9 124 aa14.13□□□□□ -0.15
HMGB3-205ENST00000455596 RBFOX3A6NFN3 312 aa14.13□□□□□ -0.15
HMGB3-205ENST00000455596 KRTAP10-1P60331 282 aa14.13□□□□□ -0.15
HMGB3-205ENST00000455596 KCNIP4Q6PIL6 250 aa14.13□□□□□ -0.15
HMGB3-205ENST00000455596 CHCHD7Q9BUK0 85 aa14.13□□□□□ -0.15
HMGB3-205ENST00000455596 KIF25-AS1Q9Y6Z4 181 aa14.13□□□□□ -0.15
HMGB3-205ENST00000455596 A0A087WX48 190 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms