RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 PYDC2Q56P42 97 aa2.65□□□□□ -1.99
HMGB3P21-201ENST00000452483 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
HMGB3P21-201ENST00000452483 ZNF833PQ6ZTB9 187 aa2.65□□□□□ -1.99
HMGB3P21-201ENST00000452483 SH2D6Q7Z4S9 175 aa2.65□□□□□ -1.99
HMGB3P21-201ENST00000452483 CDC42SE1Q9NRR8 79 aa2.65□□□□□ -1.99
HMGB3P21-201ENST00000452483 COL2A1P02458 1487 aaPredicted RBP2.65□□□□□ -1.99
HMGB3P21-201ENST00000452483 UGGT2Q9NYU1 1516 aa2.64□□□□□ -1.99
HMGB3P21-201ENST00000452483 IGLV3-16A0A075B6K0 115 aa2.64□□□□□ -1.99
HMGB3P21-201ENST00000452483 TRBV7-1A0A0A6YYK4 115 aa2.64□□□□□ -1.99
HMGB3P21-201ENST00000452483 C2orf70A6NJV1 201 aa2.64□□□□□ -1.99
HMGB3P21-201ENST00000452483 H3BUT2 72 aa2.64□□□□□ -1.99
HMGB3P21-201ENST00000452483 IGKV3-15P01624 115 aa2.64□□□□□ -1.99
HMGB3P21-201ENST00000452483 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P21-201ENST00000452483 HEPN1Q6WQI6 88 aa2.64□□□□□ -1.99
HMGB3P21-201ENST00000452483 LYPD1Q8N2G4 141 aa2.64□□□□□ -1.99
HMGB3P21-201ENST00000452483 C9orf163Q8N9P6 203 aa2.64□□□□□ -1.99
HMGB3P21-201ENST00000452483 Q9BRP9 147 aa2.64□□□□□ -1.99
HMGB3P21-201ENST00000452483 PSORS1C2Q9UIG4 136 aa2.64□□□□□ -1.99
HMGB3P21-201ENST00000452483 PTPRMP28827 1452 aa2.64□□□□□ -1.99
HMGB3P21-201ENST00000452483 SHANK2Q9UPX8 1470 aa2.64□□□□□ -1.99
HMGB3P21-201ENST00000452483 COL11A1P12107 1806 aaPredicted RBP2.63□□□□□ -1.99
HMGB3P21-201ENST00000452483 KIAA1549LQ6ZVL6 1849 aa2.63□□□□□ -1.99
HMGB3P21-201ENST00000452483 NOTCH3Q9UM47 2321 aa2.63□□□□□ -1.99
HMGB3P21-201ENST00000452483 PEAK1Q9H792 1746 aa2.63□□□□□ -1.99
HMGB3P21-201ENST00000452483 HFM1A2PYH4 1435 aa2.63□□□□□ -1.99
HMGB3P21-201ENST00000452483 TRAV12-3A0A0B4J271 114 aa2.63□□□□□ -1.99
HMGB3P21-201ENST00000452483 A0A0G2JND7 137 aa2.63□□□□□ -1.99
HMGB3P21-201ENST00000452483 MUC21A0A140T8X8 626 aa2.63□□□□□ -1.99
HMGB3P21-201ENST00000452483 SIX6O95475 246 aa2.63□□□□□ -1.99
HMGB3P21-201ENST00000452483 SMIM11AP58511 58 aa2.63□□□□□ -1.99
HMGB3P21-201ENST00000452483 KRTAP10-5P60370 271 aa2.63□□□□□ -1.99
HMGB3P21-201ENST00000452483 PMCHL1Q16048 86 aa2.63□□□□□ -1.99
HMGB3P21-201ENST00000452483 LY6EQ16553 131 aa2.63□□□□□ -1.99
HMGB3P21-201ENST00000452483 C10orf128Q5T292 105 aa2.63□□□□□ -1.99
HMGB3P21-201ENST00000452483 LYPD5Q6UWN5 251 aa2.63□□□□□ -1.99
HMGB3P21-201ENST00000452483 IFI27L1Q96BM0 104 aa2.63□□□□□ -1.99
HMGB3P21-201ENST00000452483 TIMM21Q9BVV7 248 aa2.63□□□□□ -1.99
HMGB3P21-201ENST00000452483 C22orf24Q9Y442 160 aa2.63□□□□□ -1.99
HMGB3P21-201ENST00000452483 MYH4Q9Y623 1939 aa2.63□□□□□ -1.99
HMGB3P21-201ENST00000452483 KIAA2026Q5HYC2 2103 aa2.63□□□□□ -1.99
HMGB3P21-201ENST00000452483 ATP10BO94823 1461 aa2.63□□□□□ -1.99
HMGB3P21-201ENST00000452483 MLH3Q9UHC1 1453 aa2.63□□□□□ -1.99
HMGB3P21-201ENST00000452483 PTPRDP23468 1912 aa2.62□□□□□ -1.99
HMGB3P21-201ENST00000452483 LTN1O94822 1766 aa2.62□□□□□ -1.99
HMGB3P21-201ENST00000452483 CXorf51AA0A1B0GTR3 108 aa2.62□□□□□ -1.99
HMGB3P21-201ENST00000452483 SNRPFP62306 86 aaKnown RBP2.62□□□□□ -1.99
HMGB3P21-201ENST00000452483 IGFBP7Q16270 282 aa2.62□□□□□ -1.99
HMGB3P21-201ENST00000452483 Q6ZTI0 123 aa2.62□□□□□ -1.99
HMGB3P21-201ENST00000452483 NDUFA11Q86Y39 141 aa2.62□□□□□ -1.99
HMGB3P21-201ENST00000452483 RPS10P5Q9NQ39 176 aa2.62□□□□□ -1.99
HMGB3P21-201ENST00000452483 HIGD1BQ9P298 99 aa2.62□□□□□ -1.99
HMGB3P21-201ENST00000452483 PRO1854Q9UHT4 67 aa2.62□□□□□ -1.99
HMGB3P21-201ENST00000452483 NCOA2Q15596 1464 aa2.62□□□□□ -1.99
HMGB3P21-201ENST00000452483 DISP1Q96F81 1524 aa2.62□□□□□ -1.99
HMGB3P21-201ENST00000452483 MUC22E2RYF6 1773 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P21-201ENST00000452483 SDK2Q58EX2 2172 aa2.61□□□□□ -1.99
HMGB3P21-201ENST00000452483 PRR14LQ5THK1 2151 aa2.61□□□□□ -1.99
HMGB3P21-201ENST00000452483 MAP3K4Q9Y6R4 1608 aa2.61□□□□□ -1.99
HMGB3P21-201ENST00000452483 MYO18AQ92614 2054 aaKnown RBP2.61□□□□□ -1.99
HMGB3P21-201ENST00000452483 TANC1Q9C0D5 1861 aa2.61□□□□□ -1.99
HMGB3P21-201ENST00000452483 TRAV23DV6A0A075B6W5 121 aa2.61□□□□□ -1.99
HMGB3P21-201ENST00000452483 TRBV10-1A0A0K0K1A3 114 aa2.61□□□□□ -1.99
HMGB3P21-201ENST00000452483 A0A1W2PNM2 257 aa2.61□□□□□ -1.99
HMGB3P21-201ENST00000452483 GNGT1P63211 74 aa2.61□□□□□ -1.99
HMGB3P21-201ENST00000452483 PDE6HQ13956 83 aa2.61□□□□□ -1.99
HMGB3P21-201ENST00000452483 C1orf137Q5JT78 98 aa2.61□□□□□ -1.99
HMGB3P21-201ENST00000452483 KRTAP26-1Q6PEX3 210 aa2.61□□□□□ -1.99
HMGB3P21-201ENST00000452483 C18orf32Q8TCD1 76 aa2.61□□□□□ -1.99
HMGB3P21-201ENST00000452483 LINC00167Q96N53 147 aa2.61□□□□□ -1.99
HMGB3P21-201ENST00000452483 CYSTM1Q9H1C7 97 aa2.61□□□□□ -1.99
HMGB3P21-201ENST00000452483 STRCQ7RTU9 1775 aa2.61□□□□□ -1.99
HMGB3P21-201ENST00000452483 SCN11AQ9UI33 1791 aa2.61□□□□□ -1.99
HMGB3P21-201ENST00000452483 ARHGAP32A7KAX9 2087 aa2.61□□□□□ -1.99
HMGB3P21-201ENST00000452483 MROH1Q8NDA8 1641 aa2.6□□□□□ -1.99
HMGB3P21-201ENST00000452483 MYO16Q9Y6X6 1858 aa2.6□□□□□ -1.99
HMGB3P21-201ENST00000452483 CLTCQ00610 1675 aaKnown RBP2.6□□□□□ -1.99
HMGB3P21-201ENST00000452483 LAMB1P07942 1786 aa2.6□□□□□ -1.99
HMGB3P21-201ENST00000452483 TRBV7-3A0A075B6L6 115 aa2.6□□□□□ -1.99
HMGB3P21-201ENST00000452483 IGHV3-33P01772 117 aa2.6□□□□□ -1.99
HMGB3P21-201ENST00000452483 CTSGP08311 255 aa2.6□□□□□ -1.99
HMGB3P21-201ENST00000452483 HRES1P13985 223 aa2.6□□□□□ -1.99
HMGB3P21-201ENST00000452483 MOBPQ13875 183 aa2.6□□□□□ -1.99
HMGB3P21-201ENST00000452483 ELOBQ15370 118 aa2.6□□□□□ -1.99
HMGB3P21-201ENST00000452483 DEFB134Q4QY38 66 aa2.6□□□□□ -1.99
HMGB3P21-201ENST00000452483 CSAG1Q6PB30 78 aa2.6□□□□□ -1.99
HMGB3P21-201ENST00000452483 ZNF818PQ6ZRF7 136 aa2.6□□□□□ -1.99
HMGB3P21-201ENST00000452483 C4orf3Q8WVX3 66 aa2.6□□□□□ -1.99
HMGB3P21-201ENST00000452483 FAM167A-AS1Q96KT0 104 aa2.6□□□□□ -1.99
HMGB3P21-201ENST00000452483 PRO2289Q9P1D8 64 aa2.6□□□□□ -1.99
HMGB3P21-201ENST00000452483 PATJQ8NI35 1801 aa2.6□□□□□ -1.99
HMGB3P21-201ENST00000452483 INO80Q9ULG1 1556 aaPredicted RBP2.6□□□□□ -1.99
HMGB3P21-201ENST00000452483 FREM3P0C091 2139 aa2.6□□□□□ -1.99
HMGB3P21-201ENST00000452483 SHROOM2Q13796 1616 aa2.6□□□□□ -1.99
HMGB3P21-201ENST00000452483 COL1A2P08123 1366 aa2.6□□□□□ -1.99
HMGB3P21-201ENST00000452483 TET3O43151 1660 aa2.6□□□□□ -1.99
HMGB3P21-201ENST00000452483 NWD2Q9ULI1 1742 aa2.59□□□□□ -1.99
HMGB3P21-201ENST00000452483 NINQ8N4C6 2090 aa2.59□□□□□ -1.99
HMGB3P21-201ENST00000452483 PCNX2A6NKB5 2137 aa2.59□□□□□ -1.99
HMGB3P21-201ENST00000452483 UNC13BO14795 1591 aa2.59□□□□□ -1.99
HMGB3P21-201ENST00000452483 TEX49A0A1B0GTD5 131 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms