RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 TTC32Q5I0X7 151 aa12.96□□□□□ -0.33
SCUBE2-202ENST00000450649 Q8N1Y9 231 aa12.96□□□□□ -0.33
SCUBE2-202ENST00000450649 RPL39P62891 51 aaKnown RBP12.95□□□□□ -0.34
SCUBE2-202ENST00000450649 ZFAND2AQ8N6M9 145 aa12.95□□□□□ -0.34
SCUBE2-202ENST00000450649 FAM110DQ8TAY7 271 aaPredicted RBP12.95□□□□□ -0.34
SCUBE2-202ENST00000450649 J3QQQ9 107 aa12.95□□□□□ -0.34
SCUBE2-202ENST00000450649 PPP1R17O96001 155 aa12.95□□□□□ -0.34
SCUBE2-202ENST00000450649 Q8N9W7 124 aa12.95□□□□□ -0.34
SCUBE2-202ENST00000450649 ZNRF2Q8NHG8 242 aa12.95□□□□□ -0.34
SCUBE2-202ENST00000450649 C20orf173Q96LM9 149 aa12.95□□□□□ -0.34
SCUBE2-202ENST00000450649 TRAV21A0A0B4J279 112 aa12.95□□□□□ -0.34
SCUBE2-202ENST00000450649 IFITM1P13164 125 aa12.95□□□□□ -0.34
SCUBE2-202ENST00000450649 KLK9Q2XQG4 91 aa12.95□□□□□ -0.34
SCUBE2-202ENST00000450649 KLK9Q9UKQ9 250 aa12.95□□□□□ -0.34
SCUBE2-202ENST00000450649 LENEPQ9Y5L5 61 aa12.95□□□□□ -0.34
SCUBE2-202ENST00000450649 TCF15Q12870 199 aa12.94□□□□□ -0.34
SCUBE2-202ENST00000450649 TMEM263Q8WUH6 116 aaKnown RBP12.94□□□□□ -0.34
SCUBE2-202ENST00000450649 LGALS3P17931 250 aaKnown RBP12.94□□□□□ -0.34
SCUBE2-202ENST00000450649 MUC6Q6W4X9 2439 aa12.94□□□□□ -0.34
SCUBE2-202ENST00000450649 GNRH2O43555 120 aa12.93□□□□□ -0.34
SCUBE2-202ENST00000450649 TRBV7-9A0A0J9YWB2 115 aa12.92□□□□□ -0.34
SCUBE2-202ENST00000450649 ELANEP08246 267 aa12.92□□□□□ -0.34
SCUBE2-202ENST00000450649 C11orf71Q6IPW1 123 aa12.92□□□□□ -0.34
SCUBE2-202ENST00000450649 P0DMU3 169 aa12.92□□□□□ -0.34
SCUBE2-202ENST00000450649 FAM231AP0DMU4 169 aa12.92□□□□□ -0.34
SCUBE2-202ENST00000450649 FAM231CP0DMU5 169 aa12.92□□□□□ -0.34
SCUBE2-202ENST00000450649 TMEM141Q96I45 108 aa12.92□□□□□ -0.34
SCUBE2-202ENST00000450649 ATP6V0E1O15342 81 aa12.92□□□□□ -0.34
SCUBE2-202ENST00000450649 DEFB1P60022 68 aa12.92□□□□□ -0.34
SCUBE2-202ENST00000450649 ITLN2Q8WWU7 325 aaPredicted RBP12.92□□□□□ -0.34
SCUBE2-202ENST00000450649 LINC00477Q96M19 166 aa12.92□□□□□ -0.34
SCUBE2-202ENST00000450649 U3KQE9 123 aa12.92□□□□□ -0.34
SCUBE2-202ENST00000450649 TRAV2A0A0B4J234 112 aa12.91□□□□□ -0.34
SCUBE2-202ENST00000450649 TEX49A0A1B0GTD5 131 aa12.91□□□□□ -0.34
SCUBE2-202ENST00000450649 K7ENP7 123 aa12.91□□□□□ -0.34
SCUBE2-202ENST00000450649 ZNF876PQ49A33 203 aa12.91□□□□□ -0.34
SCUBE2-202ENST00000450649 LINC01620Q4KN68 170 aa12.91□□□□□ -0.34
SCUBE2-202ENST00000450649 ODF3Q96PU9 254 aa12.91□□□□□ -0.34
SCUBE2-202ENST00000450649 RNASE3P12724 160 aaKnown RBP12.91□□□□□ -0.34
SCUBE2-202ENST00000450649 Q6Q795 121 aa12.91□□□□□ -0.34
SCUBE2-202ENST00000450649 TIMM17AQ99595 171 aa12.91□□□□□ -0.34
SCUBE2-202ENST00000450649 Q1RN00 199 aa12.9□□□□□ -0.34
SCUBE2-202ENST00000450649 C9orf139Q6ZV77 190 aa12.9□□□□□ -0.34
SCUBE2-202ENST00000450649 MUSTN1Q8IVN3 82 aa12.9□□□□□ -0.34
SCUBE2-202ENST00000450649 TRAV8-4A0A0B4J246 113 aa12.9□□□□□ -0.34
SCUBE2-202ENST00000450649 A0A0B4J2C4 111 aa12.9□□□□□ -0.34
SCUBE2-202ENST00000450649 G3V318 75 aa12.9□□□□□ -0.34
SCUBE2-202ENST00000450649 IGHV4-39P01824 125 aa12.9□□□□□ -0.34
SCUBE2-202ENST00000450649 RNASE4P34096 147 aaKnown RBP12.9□□□□□ -0.34
SCUBE2-202ENST00000450649 POLR2KP53803 58 aaKnown RBP12.9□□□□□ -0.34
SCUBE2-202ENST00000450649 ATXN8Q156A1 80 aa12.9□□□□□ -0.34
SCUBE2-202ENST00000450649 CFAP161Q6P656 301 aa12.9□□□□□ -0.34
SCUBE2-202ENST00000450649 SHISA2Q6UWI4 295 aa12.9□□□□□ -0.34
SCUBE2-202ENST00000450649 SPG11Q96JI7 2443 aa12.9□□□□□ -0.34
SCUBE2-202ENST00000450649 NCOR2Q9Y618 2525 aa12.9□□□□□ -0.35
SCUBE2-202ENST00000450649 CHD8Q9HCK8 2581 aa12.9□□□□□ -0.35
SCUBE2-202ENST00000450649 MED14OSP0DP75 135 aa12.89□□□□□ -0.35
SCUBE2-202ENST00000450649 ZFP36P26651 326 aaKnown RBP12.89□□□□□ -0.35
SCUBE2-202ENST00000450649 LINC00315P59091 139 aa12.89□□□□□ -0.35
SCUBE2-202ENST00000450649 SMIM20Q8N5G0 67 aa12.89□□□□□ -0.35
SCUBE2-202ENST00000450649 POM121L12Q8N7R1 296 aa12.89□□□□□ -0.35
SCUBE2-202ENST00000450649 C15orf53Q8NAA6 179 aa12.89□□□□□ -0.35
SCUBE2-202ENST00000450649 OR10J6PQ8NGY7 276 aa12.89□□□□□ -0.35
SCUBE2-202ENST00000450649 EEF1AKMT3Q96AZ1 226 aa12.89□□□□□ -0.35
SCUBE2-202ENST00000450649 RPL32P62910 135 aaKnown RBP12.89□□□□□ -0.35
SCUBE2-202ENST00000450649 HERV-K104P63124 156 aa12.89□□□□□ -0.35
SCUBE2-202ENST00000450649 SIRPDQ9H106 197 aa12.89□□□□□ -0.35
SCUBE2-202ENST00000450649 KIF25-AS1Q9Y6Z4 181 aa12.89□□□□□ -0.35
SCUBE2-202ENST00000450649 IGHV4OR15-8A0A075B7B6 117 aa12.89□□□□□ -0.35
SCUBE2-202ENST00000450649 A0A087WW49 117 aa12.89□□□□□ -0.35
SCUBE2-202ENST00000450649 CCL21O00585 134 aa12.89□□□□□ -0.35
SCUBE2-202ENST00000450649 FAM110AQ9BQ89 295 aa12.89□□□□□ -0.35
SCUBE2-202ENST00000450649 FAM159AQ6UWV7 190 aa12.88□□□□□ -0.35
SCUBE2-202ENST00000450649 BEX4Q9NWD9 120 aaPredicted RBP12.88□□□□□ -0.35
SCUBE2-202ENST00000450649 VCYO14598 125 aa12.88□□□□□ -0.35
SCUBE2-202ENST00000450649 RPL13AP40429 203 aaKnown RBP12.88□□□□□ -0.35
SCUBE2-202ENST00000450649 JPT2Q9H910 190 aa12.88□□□□□ -0.35
SCUBE2-202ENST00000450649 CDSNQ15517 529 aa12.87□□□□□ -0.35
SCUBE2-202ENST00000450649 MUC4Q99102 2169 aa12.87□□□□□ -0.35
SCUBE2-202ENST00000450649 SUMO4Q6EEV6 95 aa12.87□□□□□ -0.35
SCUBE2-202ENST00000450649 VPS13CQ709C8 3753 aa12.87□□□□□ -0.35
SCUBE2-202ENST00000450649 IGHV3-64A0A075B6Q5 118 aa12.86□□□□□ -0.35
SCUBE2-202ENST00000450649 LEPROTO15243 131 aa12.86□□□□□ -0.35
SCUBE2-202ENST00000450649 TRBV7-1A0A0A6YYK4 115 aa12.86□□□□□ -0.35
SCUBE2-202ENST00000450649 TRBV10-2A0A0K0K1G8 114 aa12.86□□□□□ -0.35
SCUBE2-202ENST00000450649 OPRPNQ99935 248 aaPredicted RBP12.86□□□□□ -0.35
SCUBE2-202ENST00000450649 TMEM223A0PJW6 202 aa12.85□□□□□ -0.35
SCUBE2-202ENST00000450649 SDHAF1A6NFY7 115 aa12.85□□□□□ -0.35
SCUBE2-202ENST00000450649 UBE2E1P51965 193 aa12.85□□□□□ -0.35
SCUBE2-202ENST00000450649 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.85□□□□□ -0.35
SCUBE2-202ENST00000450649 H3BMM0 161 aa12.85□□□□□ -0.35
SCUBE2-202ENST00000450649 OVOL1O14753 267 aa12.85□□□□□ -0.35
SCUBE2-202ENST00000450649 UBE2WQ96B02 151 aa12.85□□□□□ -0.35
SCUBE2-202ENST00000450649 LINC01600Q96MT4 127 aa12.85□□□□□ -0.35
SCUBE2-202ENST00000450649 NXPH4O95158 308 aa12.85□□□□□ -0.35
SCUBE2-202ENST00000450649 A0A087WWL8 130 aa12.84□□□□□ -0.35
SCUBE2-202ENST00000450649 F5H697 171 aa12.84□□□□□ -0.35
SCUBE2-202ENST00000450649 F6UB75 175 aa12.84□□□□□ -0.35
SCUBE2-202ENST00000450649 TRIAP1O43715 76 aa12.84□□□□□ -0.35
SCUBE2-202ENST00000450649 LGALS9O00182 355 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms