RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ESRGQ1W209 222 aa9.72□□□□□ -0.85
GTF3C3-206ENST00000448539 SH2D6Q7Z4S9 175 aa9.72□□□□□ -0.85
GTF3C3-206ENST00000448539 SAMD10Q9BYL1 202 aa9.72□□□□□ -0.85
GTF3C3-206ENST00000448539 IGLV2-18A0A075B6J9 118 aa9.71□□□□□ -0.86
GTF3C3-206ENST00000448539 NXPH4O95158 308 aa9.71□□□□□ -0.86
GTF3C3-206ENST00000448539 IGLC6P0CF74 106 aa9.71□□□□□ -0.86
GTF3C3-206ENST00000448539 SMIM17P0DL12 118 aa9.71□□□□□ -0.86
GTF3C3-206ENST00000448539 CACNG7P62955 275 aa9.71□□□□□ -0.86
GTF3C3-206ENST00000448539 SRSF3P84103 164 aaKnown RBP9.71□□□□□ -0.86
GTF3C3-206ENST00000448539 TMEM241Q24JQ0 296 aa9.71□□□□□ -0.86
GTF3C3-206ENST00000448539 FAM231DQ6ZW35 169 aa9.71□□□□□ -0.86
GTF3C3-206ENST00000448539 LINC01551Q86U37 167 aa9.71□□□□□ -0.86
GTF3C3-206ENST00000448539 KMT2AQ03164 3969 aa9.71□□□□□ -0.86
GTF3C3-206ENST00000448539 FRAS1Q86XX4 4008 aa9.71□□□□□ -0.86
GTF3C3-206ENST00000448539 LOC100131303A0A0U1RQF7 123 aa9.7□□□□□ -0.86
GTF3C3-206ENST00000448539 C9JQL5 133 aa9.7□□□□□ -0.86
GTF3C3-206ENST00000448539 SOHLH1Q5JUK2 328 aa9.7□□□□□ -0.86
GTF3C3-206ENST00000448539 AP1S3Q96PC3 154 aa9.7□□□□□ -0.86
GTF3C3-206ENST00000448539 MRPS16Q9Y3D3 137 aaKnown RBP9.7□□□□□ -0.86
GTF3C3-206ENST00000448539 A8MWL6 223 aa9.69□□□□□ -0.86
GTF3C3-206ENST00000448539 M0R2N4 97 aa9.69□□□□□ -0.86
GTF3C3-206ENST00000448539 CRYGDP07320 174 aa9.69□□□□□ -0.86
GTF3C3-206ENST00000448539 CLLU1Q5K131 121 aa9.69□□□□□ -0.86
GTF3C3-206ENST00000448539 UFSP1Q6NVU6 142 aa9.69□□□□□ -0.86
GTF3C3-206ENST00000448539 LYPD5Q6UWN5 251 aa9.69□□□□□ -0.86
GTF3C3-206ENST00000448539 LYZL1Q6UWQ5 148 aa9.69□□□□□ -0.86
GTF3C3-206ENST00000448539 C15orf54Q8N8G6 183 aa9.69□□□□□ -0.86
GTF3C3-206ENST00000448539 NAT8Q9UHE5 227 aa9.69□□□□□ -0.86
GTF3C3-206ENST00000448539 NACAE9PAV3 2078 aa9.68□□□□□ -0.86
GTF3C3-206ENST00000448539 IFITM2Q01629 132 aa9.68□□□□□ -0.86
GTF3C3-206ENST00000448539 ADIRFQ15847 76 aa9.68□□□□□ -0.86
GTF3C3-206ENST00000448539 ZNF56Q15929 161 aa9.68□□□□□ -0.86
GTF3C3-206ENST00000448539 Q6ZSN1 163 aa9.68□□□□□ -0.86
GTF3C3-206ENST00000448539 C14orf178Q8N769 122 aaPredicted RBP9.68□□□□□ -0.86
GTF3C3-206ENST00000448539 ZNRF2Q8NHG8 242 aa9.68□□□□□ -0.86
GTF3C3-206ENST00000448539 UPK3BQ9BT76 320 aa9.68□□□□□ -0.86
GTF3C3-206ENST00000448539 Q9H8V8 135 aa9.68□□□□□ -0.86
GTF3C3-206ENST00000448539 VPS13DQ5THJ4 4388 aa9.68□□□□□ -0.86
GTF3C3-206ENST00000448539 GAGE12JA6NER3 117 aa9.67□□□□□ -0.86
GTF3C3-206ENST00000448539 F5H697 171 aa9.67□□□□□ -0.86
GTF3C3-206ENST00000448539 TRGC1P0CF51 173 aa9.67□□□□□ -0.86
GTF3C3-206ENST00000448539 GAGE1Q13065 139 aa9.67□□□□□ -0.86
GTF3C3-206ENST00000448539 GAGE4Q13068 117 aa9.67□□□□□ -0.86
GTF3C3-206ENST00000448539 GAGE5Q13069 117 aa9.67□□□□□ -0.86
GTF3C3-206ENST00000448539 GAGE13Q4V321 117 aa9.67□□□□□ -0.86
GTF3C3-206ENST00000448539 CT83Q5H943 113 aa9.67□□□□□ -0.86
GTF3C3-206ENST00000448539 OSTCQ9NRP0 149 aa9.67□□□□□ -0.86
GTF3C3-206ENST00000448539 CTRLP40313 264 aa9.66□□□□□ -0.86
GTF3C3-206ENST00000448539 RAB4BP61018 213 aa9.66□□□□□ -0.86
GTF3C3-206ENST00000448539 RPL23P62829 140 aaKnown RBP9.66□□□□□ -0.86
GTF3C3-206ENST00000448539 TWIST1Q15672 202 aa9.66□□□□□ -0.86
GTF3C3-206ENST00000448539 WDR73Q6P4I2 378 aa9.66□□□□□ -0.86
GTF3C3-206ENST00000448539 ATP6V0E2Q8NHE4 81 aa9.66□□□□□ -0.86
GTF3C3-206ENST00000448539 ISOC2Q96AB3 205 aa9.66□□□□□ -0.86
GTF3C3-206ENST00000448539 BORCS7Q96B45 105 aa9.66□□□□□ -0.86
GTF3C3-206ENST00000448539 TRBV10-1A0A0K0K1A3 114 aa9.65□□□□□ -0.86
GTF3C3-206ENST00000448539 MGPP08493 103 aa9.65□□□□□ -0.86
GTF3C3-206ENST00000448539 NTF3P20783 257 aa9.65□□□□□ -0.86
GTF3C3-206ENST00000448539 MSRB1Q9NZV6 116 aa9.65□□□□□ -0.86
GTF3C3-206ENST00000448539 NBDYA0A0U1RRE5 68 aa9.64□□□□□ -0.87
GTF3C3-206ENST00000448539 SIVA1O15304 175 aa9.64□□□□□ -0.87
GTF3C3-206ENST00000448539 TIRAPP58753 221 aa9.64□□□□□ -0.87
GTF3C3-206ENST00000448539 RPL36AP83881 106 aaKnown RBP9.64□□□□□ -0.87
GTF3C3-206ENST00000448539 TTC32Q5I0X7 151 aa9.64□□□□□ -0.87
GTF3C3-206ENST00000448539 SMIM15Q7Z3B0 74 aa9.64□□□□□ -0.87
GTF3C3-206ENST00000448539 OR10G8Q8NGN5 311 aa9.64□□□□□ -0.87
GTF3C3-206ENST00000448539 TSKUQ8WUA8 353 aa9.64□□□□□ -0.87
GTF3C3-206ENST00000448539 GTSF1Q8WW33 167 aa9.64□□□□□ -0.87
GTF3C3-206ENST00000448539 RPL36ALQ969Q0 106 aaKnown RBP9.64□□□□□ -0.87
GTF3C3-206ENST00000448539 PGLYRP4Q96LB8 373 aa9.64□□□□□ -0.87
GTF3C3-206ENST00000448539 DNAH10Q8IVF4 4471 aa9.64□□□□□ -0.87
GTF3C3-206ENST00000448539 CNFNQ9BYD5 112 aa9.63□□□□□ -0.87
GTF3C3-206ENST00000448539 GFRA4Q9GZZ7 299 aa9.63□□□□□ -0.87
GTF3C3-206ENST00000448539 GTSF1LQ9H1H1 148 aa9.63□□□□□ -0.87
GTF3C3-206ENST00000448539 DPH3P1Q9H4G8 78 aa9.63□□□□□ -0.87
GTF3C3-206ENST00000448539 TRAV8-6A0A0B4J262 113 aa9.62□□□□□ -0.87
GTF3C3-206ENST00000448539 FAM231BA6NCW3 169 aa9.62□□□□□ -0.87
GTF3C3-206ENST00000448539 EVI2AP22794 236 aa9.62□□□□□ -0.87
GTF3C3-206ENST00000448539 OR10J3Q5JRS4 329 aa9.62□□□□□ -0.87
GTF3C3-206ENST00000448539 Q6ZR54 194 aa9.62□□□□□ -0.87
GTF3C3-206ENST00000448539 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.62□□□□□ -0.87
GTF3C3-206ENST00000448539 KIF25-AS1Q9Y6Z4 181 aa9.62□□□□□ -0.87
GTF3C3-206ENST00000448539 V9GYV3 84 aa9.62□□□□□ -0.87
GTF3C3-206ENST00000448539 TRBV7-3A0A075B6L6 115 aa9.61□□□□□ -0.87
GTF3C3-206ENST00000448539 HIGD1CA8MV81 97 aa9.61□□□□□ -0.87
GTF3C3-206ENST00000448539 H7C1H1 209 aa9.61□□□□□ -0.87
GTF3C3-206ENST00000448539 FOXA3P55318 350 aaPredicted RBP9.61□□□□□ -0.87
GTF3C3-206ENST00000448539 C1orf134Q5TEV5 83 aa9.61□□□□□ -0.87
GTF3C3-206ENST00000448539 UQCC3Q6UW78 93 aa9.61□□□□□ -0.87
GTF3C3-206ENST00000448539 Q9UF83 564 aa9.61□□□□□ -0.87
GTF3C3-206ENST00000448539 DNAH6Q9C0G6 4158 aa9.6□□□□□ -0.87
GTF3C3-206ENST00000448539 TRAV9-2A0A087WT02 112 aa9.6□□□□□ -0.87
GTF3C3-206ENST00000448539 LINC00694P0DN24 101 aa9.6□□□□□ -0.87
GTF3C3-206ENST00000448539 LELP1Q5T871 98 aa9.6□□□□□ -0.87
GTF3C3-206ENST00000448539 A0A087WWC5 75 aa9.59□□□□□ -0.87
GTF3C3-206ENST00000448539 A0A1B0GUT8 65 aa9.59□□□□□ -0.87
GTF3C3-206ENST00000448539 LINC00315P59091 139 aa9.59□□□□□ -0.87
GTF3C3-206ENST00000448539 PNRC1Q12796 327 aaPredicted RBP9.59□□□□□ -0.87
GTF3C3-206ENST00000448539 SUMO4Q6EEV6 95 aa9.59□□□□□ -0.87
GTF3C3-206ENST00000448539 WFDC10BQ8IUB3 73 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms