RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 IGF1P05019 195 aa7.1□□□□□ -1.27
SYNPO2-204ENST00000448416 TRAV8-3A0A0A6YYJ7 113 aa7.1□□□□□ -1.27
SYNPO2-204ENST00000448416 VCYO14598 125 aa7.1□□□□□ -1.27
SYNPO2-204ENST00000448416 OR13C6PQ8NH95 151 aa7.1□□□□□ -1.27
SYNPO2-204ENST00000448416 SPANXDQ9BXN6 97 aa7.1□□□□□ -1.27
SYNPO2-204ENST00000448416 TRAV17A0A0B4J275 112 aa7.1□□□□□ -1.27
SYNPO2-204ENST00000448416 A0A0G2JNJ9 132 aa7.1□□□□□ -1.27
SYNPO2-204ENST00000448416 A0A0J9YXY3 114 aa7.1□□□□□ -1.27
SYNPO2-204ENST00000448416 ACYP1P07311 99 aa7.1□□□□□ -1.27
SYNPO2-204ENST00000448416 NDPQ00604 133 aa7.1□□□□□ -1.27
SYNPO2-204ENST00000448416 EDA2RQ9HAV5 297 aa7.1□□□□□ -1.27
SYNPO2-204ENST00000448416 Q9UFV3 132 aa7.1□□□□□ -1.27
SYNPO2-204ENST00000448416 COL27A1Q8IZC6 1860 aaPredicted RBP7.09□□□□□ -1.27
SYNPO2-204ENST00000448416 TRAV21A0A0B4J279 112 aa7.09□□□□□ -1.27
SYNPO2-204ENST00000448416 A0A1B0GX51 115 aa7.09□□□□□ -1.27
SYNPO2-204ENST00000448416 ADARB2-AS1A8MUL3 147 aa7.09□□□□□ -1.27
SYNPO2-204ENST00000448416 LY6LH3BQJ8 138 aa7.09□□□□□ -1.27
SYNPO2-204ENST00000448416 GAGE2AQ6NT46 116 aa7.09□□□□□ -1.27
SYNPO2-204ENST00000448416 DYNLRB1Q9NP97 96 aa7.09□□□□□ -1.27
SYNPO2-204ENST00000448416 ABCA4P78363 2273 aa7.09□□□□□ -1.27
SYNPO2-204ENST00000448416 F5H697 171 aa7.09□□□□□ -1.27
SYNPO2-204ENST00000448416 LST1O00453 97 aa7.09□□□□□ -1.27
SYNPO2-204ENST00000448416 NPBQ8NG41 125 aa7.09□□□□□ -1.27
SYNPO2-204ENST00000448416 EEF1AKMT3Q96AZ1 226 aa7.09□□□□□ -1.27
SYNPO2-204ENST00000448416 C16orf92Q96LL3 132 aa7.09□□□□□ -1.27
SYNPO2-204ENST00000448416 OPRPNQ99935 248 aaPredicted RBP7.09□□□□□ -1.27
SYNPO2-204ENST00000448416 MRPL53Q96EL3 112 aaKnown RBP7.09□□□□□ -1.28
SYNPO2-204ENST00000448416 SDHAF1A6NFY7 115 aa7.08□□□□□ -1.28
SYNPO2-204ENST00000448416 POLR2KP53803 58 aaKnown RBP7.08□□□□□ -1.28
SYNPO2-204ENST00000448416 DPM3Q9P2X0 92 aa7.08□□□□□ -1.28
SYNPO2-204ENST00000448416 GNRH2O43555 120 aa7.08□□□□□ -1.28
SYNPO2-204ENST00000448416 Q6ZSV7 163 aa7.08□□□□□ -1.28
SYNPO2-204ENST00000448416 LINC00643Q86TS7 51 aa7.08□□□□□ -1.28
SYNPO2-204ENST00000448416 ZFAND3Q9H8U3 227 aa7.08□□□□□ -1.28
SYNPO2-204ENST00000448416 TRAV25A0A0B4J276 109 aa7.08□□□□□ -1.28
SYNPO2-204ENST00000448416 PF4V1P10720 104 aa7.08□□□□□ -1.28
SYNPO2-204ENST00000448416 NPC2P61916 151 aa7.08□□□□□ -1.28
SYNPO2-204ENST00000448416 DMXL2Q8TDJ6 3036 aa7.08□□□□□ -1.28
SYNPO2-204ENST00000448416 ZNF580Q9UK33 172 aa7.07□□□□□ -1.28
SYNPO2-204ENST00000448416 LOC400499M0QZD8 3231 aa7.07□□□□□ -1.28
SYNPO2-204ENST00000448416 I3L3M4 83 aa7.07□□□□□ -1.28
SYNPO2-204ENST00000448416 ATP5G1P05496 136 aa7.07□□□□□ -1.28
SYNPO2-204ENST00000448416 COX7CP15954 63 aa7.07□□□□□ -1.28
SYNPO2-204ENST00000448416 C15orf32Q32M92 178 aa7.07□□□□□ -1.28
SYNPO2-204ENST00000448416 RNASE6Q93091 150 aaKnown RBP7.07□□□□□ -1.28
SYNPO2-204ENST00000448416 MAP1BP46821 2468 aaKnown RBP7.07□□□□□ -1.28
SYNPO2-204ENST00000448416 A0A0J9YX75 114 aa7.07□□□□□ -1.28
SYNPO2-204ENST00000448416 CDX4O14627 284 aaPredicted RBP7.07□□□□□ -1.28
SYNPO2-204ENST00000448416 ZNF883P0CG24 379 aa7.07□□□□□ -1.28
SYNPO2-204ENST00000448416 IGHV4OR15-8A0A075B7B6 117 aa7.07□□□□□ -1.28
SYNPO2-204ENST00000448416 A0A087WW49 117 aa7.07□□□□□ -1.28
SYNPO2-204ENST00000448416 A0A0J9YXV3 536 aa7.07□□□□□ -1.28
SYNPO2-204ENST00000448416 BSPH1Q075Z2 132 aa7.07□□□□□ -1.28
SYNPO2-204ENST00000448416 TMEM219Q86XT9 240 aa7.07□□□□□ -1.28
SYNPO2-204ENST00000448416 LENEPQ9Y5L5 61 aa7.07□□□□□ -1.28
SYNPO2-204ENST00000448416 FAM215AQ9Y5M1 114 aa7.07□□□□□ -1.28
SYNPO2-204ENST00000448416 PRRC2AP48634 2157 aaKnown RBP7.07□□□□□ -1.28
SYNPO2-204ENST00000448416 TRAV41A0A0B4J266 112 aa7.06□□□□□ -1.28
SYNPO2-204ENST00000448416 SUMO4Q6EEV6 95 aa7.06□□□□□ -1.28
SYNPO2-204ENST00000448416 DUX5Q96PT3 197 aa7.06□□□□□ -1.28
SYNPO2-204ENST00000448416 RNASE4P34096 147 aaKnown RBP7.06□□□□□ -1.28
SYNPO2-204ENST00000448416 ZFAND2AQ8N6M9 145 aa7.06□□□□□ -1.28
SYNPO2-204ENST00000448416 SMCR5Q8TEV8 140 aa7.06□□□□□ -1.28
SYNPO2-204ENST00000448416 CNOT1A5YKK6 2376 aaKnown RBP7.06□□□□□ -1.28
SYNPO2-204ENST00000448416 TACC2O95359 2948 aa7.06□□□□□ -1.28
SYNPO2-204ENST00000448416 CLPSL1A2RUU4 121 aa7.06□□□□□ -1.28
SYNPO2-204ENST00000448416 RPS28P62857 69 aaKnown RBP7.06□□□□□ -1.28
SYNPO2-204ENST00000448416 CLEC19AQ6UXS0 136 aa7.06□□□□□ -1.28
SYNPO2-204ENST00000448416 LINC00477Q96M19 166 aa7.06□□□□□ -1.28
SYNPO2-204ENST00000448416 JPT2Q9H910 190 aa7.06□□□□□ -1.28
SYNPO2-204ENST00000448416 CACNA1BQ00975 2339 aa7.05□□□□□ -1.28
SYNPO2-204ENST00000448416 A0A087WWL8 130 aa7.05□□□□□ -1.28
SYNPO2-204ENST00000448416 WIPF1O43516 503 aa7.05□□□□□ -1.28
SYNPO2-204ENST00000448416 LYNX1G3V0Z9 82 aa7.05□□□□□ -1.28
SYNPO2-204ENST00000448416 IGHV3-30-3P0DP02 117 aa7.05□□□□□ -1.28
SYNPO2-204ENST00000448416 LYNX1P0DP58 116 aa7.05□□□□□ -1.28
SYNPO2-204ENST00000448416 RNASE3P12724 160 aaKnown RBP7.05□□□□□ -1.28
SYNPO2-204ENST00000448416 SPANXCQ9NY87 97 aa7.05□□□□□ -1.28
SYNPO2-204ENST00000448416 IGHV1-69P01742 117 aa7.05□□□□□ -1.28
SYNPO2-204ENST00000448416 MED14OSP0DP75 135 aa7.05□□□□□ -1.28
SYNPO2-204ENST00000448416 ADAMTSL4-AS1Q5T5F5 129 aa7.05□□□□□ -1.28
SYNPO2-204ENST00000448416 MUC4Q99102 2169 aa7.05□□□□□ -1.28
SYNPO2-204ENST00000448416 ASPMQ8IZT6 3477 aa7.04□□□□□ -1.28
SYNPO2-204ENST00000448416 hADV29S1A0JD25 119 aa7.04□□□□□ -1.28
SYNPO2-204ENST00000448416 LINC00315P59091 139 aa7.04□□□□□ -1.28
SYNPO2-204ENST00000448416 TIMM21Q9BVV7 248 aa7.04□□□□□ -1.28
SYNPO2-204ENST00000448416 LITAFQ99732 161 aa7.04□□□□□ -1.28
SYNPO2-204ENST00000448416 KIF25-AS1Q9Y6Z4 181 aa7.04□□□□□ -1.28
SYNPO2-204ENST00000448416 PCNX1Q96RV3 2341 aa7.04□□□□□ -1.28
SYNPO2-204ENST00000448416 TRAV12-3A0A0B4J271 114 aa7.04□□□□□ -1.28
SYNPO2-204ENST00000448416 ECSCRQ19T08 205 aa7.04□□□□□ -1.28
SYNPO2-204ENST00000448416 CSMD1Q96PZ7 3565 aa7.04□□□□□ -1.28
SYNPO2-204ENST00000448416 TRBV27A0A0K0K1C4 114 aa7.04□□□□□ -1.28
SYNPO2-204ENST00000448416 CRYGAP11844 174 aa7.04□□□□□ -1.28
SYNPO2-204ENST00000448416 DEFB1P60022 68 aa7.04□□□□□ -1.28
SYNPO2-204ENST00000448416 C20orf173Q96LM9 149 aa7.04□□□□□ -1.28
SYNPO2-204ENST00000448416 TRACP01848 142 aa7.03□□□□□ -1.28
SYNPO2-204ENST00000448416 FAM74A4Q5TZK3 123 aa7.03□□□□□ -1.28
SYNPO2-204ENST00000448416 ZDBF2Q9HCK1 2354 aa7.03□□□□□ -1.28
SYNPO2-204ENST00000448416 SPENQ96T58 3664 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms