RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 TPPP3Q9BW30 176 aa9.15□□□□□ -0.94
ERGIC3-209ENST00000447986 NAT8Q9UHE5 227 aa9.15□□□□□ -0.94
ERGIC3-209ENST00000447986 F2Z2F3 143 aa9.14□□□□□ -0.95
ERGIC3-209ENST00000447986 RHODO00212 210 aa9.14□□□□□ -0.95
ERGIC3-209ENST00000447986 GATCO43716 136 aaKnown RBP9.14□□□□□ -0.95
ERGIC3-209ENST00000447986 ZFP2Q6ZN57 461 aa9.14□□□□□ -0.95
ERGIC3-209ENST00000447986 LINC00518Q8N0U6 118 aa9.14□□□□□ -0.95
ERGIC3-209ENST00000447986 ICOSQ9Y6W8 199 aa9.14□□□□□ -0.95
ERGIC3-209ENST00000447986 C9JQL5 133 aa9.13□□□□□ -0.95
ERGIC3-209ENST00000447986 GZMBP10144 247 aa9.13□□□□□ -0.95
ERGIC3-209ENST00000447986 CCL18P55774 89 aa9.13□□□□□ -0.95
ERGIC3-209ENST00000447986 OR10AG1Q8NH19 301 aa9.13□□□□□ -0.95
ERGIC3-209ENST00000447986 SFRP2Q96HF1 295 aa9.13□□□□□ -0.95
ERGIC3-209ENST00000447986 VSIG2Q96IQ7 327 aa9.13□□□□□ -0.95
ERGIC3-209ENST00000447986 IGHV3-73A0A0B4J1V6 119 aa9.13□□□□□ -0.95
ERGIC3-209ENST00000447986 TRBV6-4A0A1B0GX49 114 aa9.13□□□□□ -0.95
ERGIC3-209ENST00000447986 A8MWL6 223 aa9.13□□□□□ -0.95
ERGIC3-209ENST00000447986 S100A6P06703 90 aa9.13□□□□□ -0.95
ERGIC3-209ENST00000447986 IGLC6P0CF74 106 aa9.13□□□□□ -0.95
ERGIC3-209ENST00000447986 CACNG7P62955 275 aa9.13□□□□□ -0.95
ERGIC3-209ENST00000447986 MRPL23Q16540 153 aaKnown RBP9.13□□□□□ -0.95
ERGIC3-209ENST00000447986 RNF212Q495C1 297 aa9.13□□□□□ -0.95
ERGIC3-209ENST00000447986 FAM74A4Q5TZK3 123 aa9.13□□□□□ -0.95
ERGIC3-209ENST00000447986 C15orf54Q8N8G6 183 aa9.13□□□□□ -0.95
ERGIC3-209ENST00000447986 PRADC1Q9BSG0 188 aa9.13□□□□□ -0.95
ERGIC3-209ENST00000447986 NXPH4O95158 308 aa9.12□□□□□ -0.95
ERGIC3-209ENST00000447986 GATA1P15976 413 aaPredicted RBP9.12□□□□□ -0.95
ERGIC3-209ENST00000447986 RHOHQ15669 191 aa9.12□□□□□ -0.95
ERGIC3-209ENST00000447986 ADIRFQ15847 76 aa9.12□□□□□ -0.95
ERGIC3-209ENST00000447986 OSTCQ9NRP0 149 aa9.12□□□□□ -0.95
ERGIC3-209ENST00000447986 SMIM17P0DL12 118 aa9.11□□□□□ -0.95
ERGIC3-209ENST00000447986 GYPEP15421 78 aa9.11□□□□□ -0.95
ERGIC3-209ENST00000447986 SRIP30626 198 aa9.11□□□□□ -0.95
ERGIC3-209ENST00000447986 FAM3BP58499 235 aaPredicted RBP9.11□□□□□ -0.95
ERGIC3-209ENST00000447986 SSTP61278 116 aa9.11□□□□□ -0.95
ERGIC3-209ENST00000447986 RPL23P62829 140 aaKnown RBP9.11□□□□□ -0.95
ERGIC3-209ENST00000447986 AP1S3Q96PC3 154 aa9.11□□□□□ -0.95
ERGIC3-209ENST00000447986 JPT2Q9H910 190 aa9.11□□□□□ -0.95
ERGIC3-209ENST00000447986 TENM2Q9NT68 2774 aa9.11□□□□□ -0.95
ERGIC3-209ENST00000447986 MUC4Q99102 2169 aa9.1□□□□□ -0.95
ERGIC3-209ENST00000447986 A0A087WWL8 130 aa9.1□□□□□ -0.95
ERGIC3-209ENST00000447986 A0A096LPF7 62 aa9.1□□□□□ -0.95
ERGIC3-209ENST00000447986 MUC21A0A0G2JKD1 596 aa9.1□□□□□ -0.95
ERGIC3-209ENST00000447986 MUC21A0A140T8X8 626 aa9.1□□□□□ -0.95
ERGIC3-209ENST00000447986 UQCC3Q6UW78 93 aa9.1□□□□□ -0.95
ERGIC3-209ENST00000447986 LYZL1Q6UWQ5 148 aa9.1□□□□□ -0.95
ERGIC3-209ENST00000447986 NEGR1Q7Z3B1 354 aa9.1□□□□□ -0.95
ERGIC3-209ENST00000447986 SH2D6Q7Z4S9 175 aa9.1□□□□□ -0.95
ERGIC3-209ENST00000447986 SLC25A29Q8N8R3 303 aa9.1□□□□□ -0.95
ERGIC3-209ENST00000447986 ISOC2Q96AB3 205 aa9.1□□□□□ -0.95
ERGIC3-209ENST00000447986 K7EQD1 137 aa9.09□□□□□ -0.95
ERGIC3-209ENST00000447986 WDR73Q6P4I2 378 aa9.09□□□□□ -0.95
ERGIC3-209ENST00000447986 BORCS7Q96B45 105 aa9.09□□□□□ -0.95
ERGIC3-209ENST00000447986 SAMD10Q9BYL1 202 aa9.09□□□□□ -0.95
ERGIC3-209ENST00000447986 CRYGDP07320 174 aa9.09□□□□□ -0.95
ERGIC3-209ENST00000447986 TRGC1P0CF51 173 aa9.09□□□□□ -0.95
ERGIC3-209ENST00000447986 CTRLP40313 264 aa9.09□□□□□ -0.95
ERGIC3-209ENST00000447986 UFSP1Q6NVU6 142 aa9.09□□□□□ -0.95
ERGIC3-209ENST00000447986 OR10G8Q8NGN5 311 aa9.09□□□□□ -0.95
ERGIC3-209ENST00000447986 GFRA4Q9GZZ7 299 aa9.09□□□□□ -0.95
ERGIC3-209ENST00000447986 FAM231BA6NCW3 169 aa9.08□□□□□ -0.96
ERGIC3-209ENST00000447986 PNRC1Q12796 327 aaPredicted RBP9.08□□□□□ -0.96
ERGIC3-209ENST00000447986 ZNF56Q15929 161 aa9.08□□□□□ -0.96
ERGIC3-209ENST00000447986 C14orf178Q8N769 122 aaPredicted RBP9.08□□□□□ -0.96
ERGIC3-209ENST00000447986 TSKUQ8WUA8 353 aa9.08□□□□□ -0.96
ERGIC3-209ENST00000447986 NTF3P20783 257 aa9.07□□□□□ -0.96
ERGIC3-209ENST00000447986 RAB4BP61018 213 aa9.07□□□□□ -0.96
ERGIC3-209ENST00000447986 TWIST1Q15672 202 aa9.07□□□□□ -0.96
ERGIC3-209ENST00000447986 SMIM15Q7Z3B0 74 aa9.07□□□□□ -0.96
ERGIC3-209ENST00000447986 GTSF1Q8WW33 167 aa9.07□□□□□ -0.96
ERGIC3-209ENST00000447986 CNFNQ9BYD5 112 aa9.07□□□□□ -0.96
ERGIC3-209ENST00000447986 F5H697 171 aa9.06□□□□□ -0.96
ERGIC3-209ENST00000447986 FOXA3P55318 350 aaPredicted RBP9.06□□□□□ -0.96
ERGIC3-209ENST00000447986 ESRGQ1W209 222 aa9.06□□□□□ -0.96
ERGIC3-209ENST00000447986 LINC00588Q9Y4M8 146 aa9.06□□□□□ -0.96
ERGIC3-209ENST00000447986 V9GYV3 84 aa9.06□□□□□ -0.96
ERGIC3-209ENST00000447986 LOC100131303A0A0U1RQF7 123 aa9.05□□□□□ -0.96
ERGIC3-209ENST00000447986 HIGD1CA8MV81 97 aa9.05□□□□□ -0.96
ERGIC3-209ENST00000447986 COMMD7Q86VX2 200 aa9.05□□□□□ -0.96
ERGIC3-209ENST00000447986 PGLYRP4Q96LB8 373 aa9.05□□□□□ -0.96
ERGIC3-209ENST00000447986 TRBV10-1A0A0K0K1A3 114 aa9.05□□□□□ -0.96
ERGIC3-209ENST00000447986 LYPD5Q6UWN5 251 aa9.05□□□□□ -0.96
ERGIC3-209ENST00000447986 Q6ZSN1 163 aa9.05□□□□□ -0.96
ERGIC3-209ENST00000447986 DPH3P1Q9H4G8 78 aa9.05□□□□□ -0.96
ERGIC3-209ENST00000447986 MSRB1Q9NZV6 116 aa9.05□□□□□ -0.96
ERGIC3-209ENST00000447986 MRPS16Q9Y3D3 137 aaKnown RBP9.05□□□□□ -0.96
ERGIC3-209ENST00000447986 DYNC2H1Q8NCM8 4307 aaKnown RBP9.04□□□□□ -0.96
ERGIC3-209ENST00000447986 F8W036 122 aa9.04□□□□□ -0.96
ERGIC3-209ENST00000447986 PPP1R2P9O14990 202 aa9.04□□□□□ -0.96
ERGIC3-209ENST00000447986 MGPP08493 103 aa9.04□□□□□ -0.96
ERGIC3-209ENST00000447986 RPL36AP83881 106 aaKnown RBP9.04□□□□□ -0.96
ERGIC3-209ENST00000447986 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.04□□□□□ -0.96
ERGIC3-209ENST00000447986 RPL36ALQ969Q0 106 aaKnown RBP9.04□□□□□ -0.96
ERGIC3-209ENST00000447986 UPK3BQ9BT76 320 aa9.04□□□□□ -0.96
ERGIC3-209ENST00000447986 NAT8BQ9UHF3 227 aa9.04□□□□□ -0.96
ERGIC3-209ENST00000447986 NACAE9PAV3 2078 aa9.03□□□□□ -0.96
ERGIC3-209ENST00000447986 A0A1B0GUT8 65 aa9.03□□□□□ -0.96
ERGIC3-209ENST00000447986 TMEM218A2RU14 115 aa9.03□□□□□ -0.96
ERGIC3-209ENST00000447986 GAGE12JA6NER3 117 aa9.03□□□□□ -0.96
ERGIC3-209ENST00000447986 PCP4L1A6NKN8 68 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 212 ms