RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 XKRY2A2RUG3 117 aa8.2□□□□□ -1.1
RFC4-208ENST00000447345 GAGE12JA6NER3 117 aa8.2□□□□□ -1.1
RFC4-208ENST00000447345 C9JQL5 133 aa8.2□□□□□ -1.1
RFC4-208ENST00000447345 NXPH4O95158 308 aa8.2□□□□□ -1.1
RFC4-208ENST00000447345 IGLC6P0CF74 106 aa8.2□□□□□ -1.1
RFC4-208ENST00000447345 GAGE1Q13065 139 aa8.2□□□□□ -1.1
RFC4-208ENST00000447345 GAGE4Q13068 117 aa8.2□□□□□ -1.1
RFC4-208ENST00000447345 GAGE5Q13069 117 aa8.2□□□□□ -1.1
RFC4-208ENST00000447345 ZNF56Q15929 161 aa8.2□□□□□ -1.1
RFC4-208ENST00000447345 GAGE13Q4V321 117 aa8.2□□□□□ -1.1
RFC4-208ENST00000447345 UFSP1Q6NVU6 142 aa8.2□□□□□ -1.1
RFC4-208ENST00000447345 LYPD5Q6UWN5 251 aa8.2□□□□□ -1.1
RFC4-208ENST00000447345 UPK3BQ9BT76 320 aa8.2□□□□□ -1.1
RFC4-208ENST00000447345 SSBP4Q9BWG4 385 aaPredicted RBP8.2□□□□□ -1.1
RFC4-208ENST00000447345 FRAS1Q86XX4 4008 aa8.19□□□□□ -1.1
RFC4-208ENST00000447345 EPPK1P58107 5090 aaKnown RBP8.19□□□□□ -1.1
RFC4-208ENST00000447345 NBDYA0A0U1RRE5 68 aa8.19□□□□□ -1.1
RFC4-208ENST00000447345 CRYGDP07320 174 aa8.19□□□□□ -1.1
RFC4-208ENST00000447345 ERVFC1-1P60608 527 aa8.19□□□□□ -1.1
RFC4-208ENST00000447345 PEA15Q15121 130 aa8.19□□□□□ -1.1
RFC4-208ENST00000447345 Q6ZR54 194 aa8.19□□□□□ -1.1
RFC4-208ENST00000447345 AP1S3Q96PC3 154 aa8.19□□□□□ -1.1
RFC4-208ENST00000447345 Q9H8V8 135 aa8.19□□□□□ -1.1
RFC4-208ENST00000447345 Q9UF83 564 aa8.19□□□□□ -1.1
RFC4-208ENST00000447345 GATCO43716 136 aaKnown RBP8.18□□□□□ -1.1
RFC4-208ENST00000447345 RAB14P61106 215 aa8.18□□□□□ -1.1
RFC4-208ENST00000447345 LYZL1Q6UWQ5 148 aa8.18□□□□□ -1.1
RFC4-208ENST00000447345 LINC01551Q86U37 167 aa8.18□□□□□ -1.1
RFC4-208ENST00000447345 WFDC10BQ8IUB3 73 aa8.18□□□□□ -1.1
RFC4-208ENST00000447345 MSRB1Q9NZV6 116 aa8.18□□□□□ -1.1
RFC4-208ENST00000447345 F5H697 171 aa8.17□□□□□ -1.1
RFC4-208ENST00000447345 SIVA1O15304 175 aa8.17□□□□□ -1.1
RFC4-208ENST00000447345 NDUFS6O75380 124 aaKnown RBP8.17□□□□□ -1.1
RFC4-208ENST00000447345 MGPP08493 103 aa8.17□□□□□ -1.1
RFC4-208ENST00000447345 SMIM17P0DL12 118 aa8.17□□□□□ -1.1
RFC4-208ENST00000447345 CTRLP40313 264 aa8.17□□□□□ -1.1
RFC4-208ENST00000447345 CACNG7P62955 275 aa8.17□□□□□ -1.1
RFC4-208ENST00000447345 KRTAP1-5Q9BYS1 174 aa8.17□□□□□ -1.1
RFC4-208ENST00000447345 LY96Q9Y6Y9 160 aa8.17□□□□□ -1.1
RFC4-208ENST00000447345 ADIRFQ15847 76 aa8.16□□□□□ -1.1
RFC4-208ENST00000447345 FAM231DQ6ZW35 169 aa8.16□□□□□ -1.1
RFC4-208ENST00000447345 SH2D6Q7Z4S9 175 aa8.16□□□□□ -1.1
RFC4-208ENST00000447345 ATP6V0E2Q8NHE4 81 aa8.16□□□□□ -1.1
RFC4-208ENST00000447345 GTSF1Q8WW33 167 aa8.16□□□□□ -1.1
RFC4-208ENST00000447345 A0A1W2PPQ1 181 aa8.15□□□□□ -1.1
RFC4-208ENST00000447345 F2Z2F3 143 aa8.15□□□□□ -1.1
RFC4-208ENST00000447345 RTL8CO15255 209 aa8.15□□□□□ -1.1
RFC4-208ENST00000447345 LINC00694P0DN24 101 aa8.15□□□□□ -1.1
RFC4-208ENST00000447345 RPL23P62829 140 aaKnown RBP8.15□□□□□ -1.1
RFC4-208ENST00000447345 TMEM241Q24JQ0 296 aa8.15□□□□□ -1.1
RFC4-208ENST00000447345 FAM74A3Q4VXF1 159 aa8.15□□□□□ -1.1
RFC4-208ENST00000447345 TTC32Q5I0X7 151 aa8.15□□□□□ -1.1
RFC4-208ENST00000447345 OR10J3Q5JRS4 329 aa8.15□□□□□ -1.1
RFC4-208ENST00000447345 C1orf134Q5TEV5 83 aa8.15□□□□□ -1.1
RFC4-208ENST00000447345 DNAH17Q9UFH2 4485 aa8.15□□□□□ -1.11
RFC4-208ENST00000447345 NTF3P20783 257 aa8.14□□□□□ -1.11
RFC4-208ENST00000447345 EVI2AP22794 236 aa8.14□□□□□ -1.11
RFC4-208ENST00000447345 RAB4BP61018 213 aa8.14□□□□□ -1.11
RFC4-208ENST00000447345 IFITM2Q01629 132 aa8.14□□□□□ -1.11
RFC4-208ENST00000447345 TWIST1Q15672 202 aa8.14□□□□□ -1.11
RFC4-208ENST00000447345 SOHLH1Q5JUK2 328 aa8.14□□□□□ -1.11
RFC4-208ENST00000447345 ISOC2Q96AB3 205 aa8.14□□□□□ -1.11
RFC4-208ENST00000447345 PGLYRP4Q96LB8 373 aa8.14□□□□□ -1.11
RFC4-208ENST00000447345 NAT8Q9UHE5 227 aa8.14□□□□□ -1.11
RFC4-208ENST00000447345 KIF25-AS1Q9Y6Z4 181 aa8.14□□□□□ -1.11
RFC4-208ENST00000447345 A8MWL6 223 aa8.13□□□□□ -1.11
RFC4-208ENST00000447345 TRGC1P0CF51 173 aa8.13□□□□□ -1.11
RFC4-208ENST00000447345 RPL36AP83881 106 aaKnown RBP8.13□□□□□ -1.11
RFC4-208ENST00000447345 CLLU1Q5K131 121 aa8.13□□□□□ -1.11
RFC4-208ENST00000447345 C6orf223Q8N319 242 aa8.13□□□□□ -1.11
RFC4-208ENST00000447345 C15orf54Q8N8G6 183 aa8.13□□□□□ -1.11
RFC4-208ENST00000447345 RPL36ALQ969Q0 106 aaKnown RBP8.13□□□□□ -1.11
RFC4-208ENST00000447345 GTSF1LQ9H1H1 148 aa8.13□□□□□ -1.11
RFC4-208ENST00000447345 SMDT1Q9H4I9 107 aa8.13□□□□□ -1.11
RFC4-208ENST00000447345 OSTCQ9NRP0 149 aa8.13□□□□□ -1.11
RFC4-208ENST00000447345 FAT2Q9NYQ8 4349 aa8.12□□□□□ -1.11
RFC4-208ENST00000447345 TRAV8-6A0A0B4J262 113 aa8.12□□□□□ -1.11
RFC4-208ENST00000447345 IGHV3-38A0A0C4DH36 116 aa8.12□□□□□ -1.11
RFC4-208ENST00000447345 TRBV10-1A0A0K0K1A3 114 aa8.12□□□□□ -1.11
RFC4-208ENST00000447345 PRSS29PA6NIE9 313 aa8.12□□□□□ -1.11
RFC4-208ENST00000447345 LINC00315P59091 139 aa8.12□□□□□ -1.11
RFC4-208ENST00000447345 CT83Q5H943 113 aa8.12□□□□□ -1.11
RFC4-208ENST00000447345 LELP1Q5T871 98 aa8.12□□□□□ -1.11
RFC4-208ENST00000447345 SUMO4Q6EEV6 95 aa8.12□□□□□ -1.11
RFC4-208ENST00000447345 NEXN-AS1Q8NBZ9 246 aa8.12□□□□□ -1.11
RFC4-208ENST00000447345 TRBV7-3A0A075B6L6 115 aa8.11□□□□□ -1.11
RFC4-208ENST00000447345 HIGD1CA8MV81 97 aa8.11□□□□□ -1.11
RFC4-208ENST00000447345 TIRAPP58753 221 aa8.11□□□□□ -1.11
RFC4-208ENST00000447345 LINC00336Q6ZUF6 198 aa8.11□□□□□ -1.11
RFC4-208ENST00000447345 OR10G8Q8NGN5 311 aa8.11□□□□□ -1.11
RFC4-208ENST00000447345 TSKUQ8WUA8 353 aa8.11□□□□□ -1.11
RFC4-208ENST00000447345 BORCS7Q96B45 105 aa8.11□□□□□ -1.11
RFC4-208ENST00000447345 CNFNQ9BYD5 112 aa8.11□□□□□ -1.11
RFC4-208ENST00000447345 DPH3P1Q9H4G8 78 aa8.11□□□□□ -1.11
RFC4-208ENST00000447345 V9GYV3 84 aa8.11□□□□□ -1.11
RFC4-208ENST00000447345 IGHV3-30P01768 117 aa8.1□□□□□ -1.11
RFC4-208ENST00000447345 IGHV3-33P01772 117 aa8.1□□□□□ -1.11
RFC4-208ENST00000447345 DNAH10OSP0CZ25 163 aa8.1□□□□□ -1.11
RFC4-208ENST00000447345 IGHV3-30-3P0DP02 117 aa8.1□□□□□ -1.11
RFC4-208ENST00000447345 IGHV3-30-5P0DP03 117 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms