RNA–Protein interactions for RNA: ENST00000446553.2

CDCA3-203, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-203ENST00000446553 ZC2HC1AQ96GY0 325 aa7.6□□□□□ -1.19
CDCA3-203ENST00000446553 KRTAP4-5Q9BYR2 181 aa7.6□□□□□ -1.19
CDCA3-203ENST00000446553 IFNA1P01562 189 aa7.59□□□□□ -1.19
CDCA3-203ENST00000446553 CCL20P78556 96 aa7.59□□□□□ -1.19
CDCA3-203ENST00000446553 SCRT2Q9NQ03 307 aa7.59□□□□□ -1.19
CDCA3-203ENST00000446553 A0A087WWC5 75 aa7.58□□□□□ -1.2
CDCA3-203ENST00000446553 IGHV3-73A0A0B4J1V6 119 aa7.58□□□□□ -1.2
CDCA3-203ENST00000446553 RAB19A4D1S5 217 aa7.58□□□□□ -1.2
CDCA3-203ENST00000446553 SH2D1AO60880 128 aa7.58□□□□□ -1.2
CDCA3-203ENST00000446553 CXCL1P09341 107 aa7.58□□□□□ -1.2
CDCA3-203ENST00000446553 ARMS2P0C7Q2 107 aa7.58□□□□□ -1.2
CDCA3-203ENST00000446553 OR10J3Q5JRS4 329 aa7.58□□□□□ -1.2
CDCA3-203ENST00000446553 DMRTA1Q5VZB9 504 aa7.58□□□□□ -1.2
CDCA3-203ENST00000446553 CST9LP1Q5W188 147 aa7.58□□□□□ -1.2
CDCA3-203ENST00000446553 NTN5Q8WTR8 489 aaPredicted RBP7.58□□□□□ -1.2
CDCA3-203ENST00000446553 SMDT1Q9H4I9 107 aa7.58□□□□□ -1.2
CDCA3-203ENST00000446553 MANBALQ9NQG1 85 aa7.58□□□□□ -1.2
CDCA3-203ENST00000446553 A0A1B0GV50 99 aa7.57□□□□□ -1.2
CDCA3-203ENST00000446553 LRCOL1A6NCL2 159 aa7.57□□□□□ -1.2
CDCA3-203ENST00000446553 RBFOX3A6NFN3 312 aa7.57□□□□□ -1.2
CDCA3-203ENST00000446553 H3BVH4 76 aa7.57□□□□□ -1.2
CDCA3-203ENST00000446553 AKR1C3P42330 323 aa7.57□□□□□ -1.2
CDCA3-203ENST00000446553 PEA15Q15121 130 aa7.57□□□□□ -1.2
CDCA3-203ENST00000446553 UQCC3Q6UW78 93 aa7.57□□□□□ -1.2
CDCA3-203ENST00000446553 Q6ZSN1 163 aa7.57□□□□□ -1.2
CDCA3-203ENST00000446553 SFRP2Q96HF1 295 aa7.57□□□□□ -1.2
CDCA3-203ENST00000446553 FAM210AQ96ND0 272 aa7.57□□□□□ -1.2
CDCA3-203ENST00000446553 GNG13Q9P2W3 67 aa7.57□□□□□ -1.2
CDCA3-203ENST00000446553 PAGE4O60829 102 aa7.56□□□□□ -1.2
CDCA3-203ENST00000446553 NDUFS6O75380 124 aaKnown RBP7.56□□□□□ -1.2
CDCA3-203ENST00000446553 BCL2P10415 239 aa7.56□□□□□ -1.2
CDCA3-203ENST00000446553 COMMD7Q86VX2 200 aa7.56□□□□□ -1.2
CDCA3-203ENST00000446553 ZFP82Q8N141 532 aa7.56□□□□□ -1.2
CDCA3-203ENST00000446553 MLST8Q9BVC4 326 aa7.56□□□□□ -1.2
CDCA3-203ENST00000446553 VAX2Q9UIW0 290 aa7.56□□□□□ -1.2
CDCA3-203ENST00000446553 PHLDA3Q9Y5J5 127 aa7.56□□□□□ -1.2
CDCA3-203ENST00000446553 FAT1Q14517 4588 aa7.55□□□□□ -1.2
CDCA3-203ENST00000446553 TRBV10-1A0A0K0K1A3 114 aa7.55□□□□□ -1.2
CDCA3-203ENST00000446553 M0R036 132 aa7.55□□□□□ -1.2
CDCA3-203ENST00000446553 PSCAO43653 123 aa7.55□□□□□ -1.2
CDCA3-203ENST00000446553 TOR2AQ5JU69 321 aa7.55□□□□□ -1.2
CDCA3-203ENST00000446553 TM2D2Q9BX73 214 aa7.55□□□□□ -1.2
CDCA3-203ENST00000446553 SAMD10Q9BYL1 202 aa7.55□□□□□ -1.2
CDCA3-203ENST00000446553 EIF5A2Q9GZV4 153 aaKnown RBP7.55□□□□□ -1.2
CDCA3-203ENST00000446553 JPT2Q9H910 190 aa7.55□□□□□ -1.2
CDCA3-203ENST00000446553 VPS13BQ7Z7G8 4022 aa7.55□□□□□ -1.2
CDCA3-203ENST00000446553 TRAV8-3A0A0A6YYJ7 113 aa7.54□□□□□ -1.2
CDCA3-203ENST00000446553 GRIFINA4D1Z8 144 aa7.54□□□□□ -1.2
CDCA3-203ENST00000446553 GAGE12JA6NER3 117 aa7.54□□□□□ -1.2
CDCA3-203ENST00000446553 XGP55808 180 aa7.54□□□□□ -1.2
CDCA3-203ENST00000446553 GAGE1Q13065 139 aa7.54□□□□□ -1.2
CDCA3-203ENST00000446553 GAGE4Q13068 117 aa7.54□□□□□ -1.2
CDCA3-203ENST00000446553 GAGE5Q13069 117 aa7.54□□□□□ -1.2
CDCA3-203ENST00000446553 GAGE13Q4V321 117 aa7.54□□□□□ -1.2
CDCA3-203ENST00000446553 C14orf178Q8N769 122 aaPredicted RBP7.54□□□□□ -1.2
CDCA3-203ENST00000446553 CHCHD7Q9BUK0 85 aa7.54□□□□□ -1.2
CDCA3-203ENST00000446553 DNAH8Q96JB1 4490 aa7.54□□□□□ -1.2
CDCA3-203ENST00000446553 PDE6DO43924 150 aa7.53□□□□□ -1.2
CDCA3-203ENST00000446553 GCSHP23434 173 aa7.53□□□□□ -1.2
CDCA3-203ENST00000446553 MEF2BQ02080 365 aaPredicted RBP7.53□□□□□ -1.2
CDCA3-203ENST00000446553 BAGE2Q86Y30 109 aa7.53□□□□□ -1.2
CDCA3-203ENST00000446553 OR10G8Q8NGN5 311 aa7.53□□□□□ -1.2
CDCA3-203ENST00000446553 SSBP4Q9BWG4 385 aaPredicted RBP7.53□□□□□ -1.2
CDCA3-203ENST00000446553 COX11Q9Y6N1 276 aa7.53□□□□□ -1.2
CDCA3-203ENST00000446553 SCO2A0A1W2PP80 73 aa7.52□□□□□ -1.21
CDCA3-203ENST00000446553 TMEM250H0YL14 139 aa7.52□□□□□ -1.21
CDCA3-203ENST00000446553 M0R381 172 aa7.52□□□□□ -1.21
CDCA3-203ENST00000446553 SNAI2O43623 268 aa7.52□□□□□ -1.21
CDCA3-203ENST00000446553 IGHV3-30P01768 117 aa7.52□□□□□ -1.21
CDCA3-203ENST00000446553 IGHV3-33P01772 117 aa7.52□□□□□ -1.21
CDCA3-203ENST00000446553 OR5AL1P0C617 328 aa7.52□□□□□ -1.21
CDCA3-203ENST00000446553 IGHV3-30-3P0DP02 117 aa7.52□□□□□ -1.21
CDCA3-203ENST00000446553 IGHV3-30-5P0DP03 117 aa7.52□□□□□ -1.21
CDCA3-203ENST00000446553 KRTAP10-1P60331 282 aa7.52□□□□□ -1.21
CDCA3-203ENST00000446553 SLC7A5P1Q8MH63 180 aa7.52□□□□□ -1.21
CDCA3-203ENST00000446553 Q8N814 137 aa7.52□□□□□ -1.21
CDCA3-203ENST00000446553 C11orf52Q96A22 123 aa7.52□□□□□ -1.21
CDCA3-203ENST00000446553 TMEM70Q9BUB7 260 aa7.52□□□□□ -1.21
CDCA3-203ENST00000446553 Q9UF83 564 aa7.52□□□□□ -1.21
CDCA3-203ENST00000446553 TRBV7-3A0A075B6L6 115 aa7.51□□□□□ -1.21
CDCA3-203ENST00000446553 A0A087WWL8 130 aa7.51□□□□□ -1.21
CDCA3-203ENST00000446553 TMSB15BA0A087X1C1 80 aa7.51□□□□□ -1.21
CDCA3-203ENST00000446553 EPM2AB3EWF7 344 aa7.51□□□□□ -1.21
CDCA3-203ENST00000446553 RAB4BP61018 213 aa7.51□□□□□ -1.21
CDCA3-203ENST00000446553 RPL36AP83881 106 aaKnown RBP7.51□□□□□ -1.21
CDCA3-203ENST00000446553 SRSF3P84103 164 aaKnown RBP7.51□□□□□ -1.21
CDCA3-203ENST00000446553 FAM74A4Q5TZK3 123 aa7.51□□□□□ -1.21
CDCA3-203ENST00000446553 PRR27Q6MZM9 219 aa7.51□□□□□ -1.21
CDCA3-203ENST00000446553 NIT1Q86X76 327 aa7.51□□□□□ -1.21
CDCA3-203ENST00000446553 RPL36ALQ969Q0 106 aaKnown RBP7.51□□□□□ -1.21
CDCA3-203ENST00000446553 SMIM12Q96EX1 92 aa7.51□□□□□ -1.21
CDCA3-203ENST00000446553 Q9HAA7 133 aa7.51□□□□□ -1.21
CDCA3-203ENST00000446553 IGLV5-52A0A0A0MRZ9 124 aa7.5□□□□□ -1.21
CDCA3-203ENST00000446553 TMEM218A2RU14 115 aa7.5□□□□□ -1.21
CDCA3-203ENST00000446553 UBE2D3P61077 147 aa7.5□□□□□ -1.21
CDCA3-203ENST00000446553 UBE2D2P62837 147 aa7.5□□□□□ -1.21
CDCA3-203ENST00000446553 ELOBQ15370 118 aa7.5□□□□□ -1.21
CDCA3-203ENST00000446553 RMI2Q96E14 147 aa7.5□□□□□ -1.21
CDCA3-203ENST00000446553 URGCP-MRPS24S4R325 110 aa7.5□□□□□ -1.21
CDCA3-203ENST00000446553 C9JQL5 133 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms