RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 RNASE7Q9H1E1 156 aaKnown RBP12.03□□□□□ -0.48
SMARCAL1-209ENST00000444508 LY96Q9Y6Y9 160 aa12.03□□□□□ -0.48
SMARCAL1-209ENST00000444508 NBDYA0A0U1RRE5 68 aa12.02□□□□□ -0.49
SMARCAL1-209ENST00000444508 ZNF727A8MUV8 499 aa12.02□□□□□ -0.49
SMARCAL1-209ENST00000444508 PEA15Q15121 130 aa12.02□□□□□ -0.49
SMARCAL1-209ENST00000444508 Q6ZR54 194 aa12.02□□□□□ -0.49
SMARCAL1-209ENST00000444508 Q6ZSN1 163 aa12.02□□□□□ -0.49
SMARCAL1-209ENST00000444508 RPP21Q9H633 154 aaKnown RBP12.02□□□□□ -0.49
SMARCAL1-209ENST00000444508 DNAH2Q9P225 4427 aa12.02□□□□□ -0.49
SMARCAL1-209ENST00000444508 EPPK1P58107 5090 aaKnown RBP12.01□□□□□ -0.49
SMARCAL1-209ENST00000444508 CRYGDP07320 174 aa12.01□□□□□ -0.49
SMARCAL1-209ENST00000444508 IGLC6P0CF74 106 aa12.01□□□□□ -0.49
SMARCAL1-209ENST00000444508 RAB14P61106 215 aa12.01□□□□□ -0.49
SMARCAL1-209ENST00000444508 SSTP61278 116 aa12.01□□□□□ -0.49
SMARCAL1-209ENST00000444508 A0A1W2PPQ1 181 aa12□□□□□ -0.49
SMARCAL1-209ENST00000444508 F2Z2F3 143 aa12□□□□□ -0.49
SMARCAL1-209ENST00000444508 CACNG7P62955 275 aa12□□□□□ -0.49
SMARCAL1-209ENST00000444508 TTC32Q5I0X7 151 aa12□□□□□ -0.49
SMARCAL1-209ENST00000444508 SOHLH1Q5JUK2 328 aa12□□□□□ -0.49
SMARCAL1-209ENST00000444508 AP1S3Q96PC3 154 aa12□□□□□ -0.49
SMARCAL1-209ENST00000444508 SIVA1O15304 175 aa11.99□□□□□ -0.49
SMARCAL1-209ENST00000444508 GATCO43716 136 aaKnown RBP11.99□□□□□ -0.49
SMARCAL1-209ENST00000444508 SMIM17P0DL12 118 aa11.99□□□□□ -0.49
SMARCAL1-209ENST00000444508 FAM74A3Q4VXF1 159 aa11.99□□□□□ -0.49
SMARCAL1-209ENST00000444508 FAM231DQ6ZW35 169 aa11.99□□□□□ -0.49
SMARCAL1-209ENST00000444508 C14orf178Q8N769 122 aaPredicted RBP11.99□□□□□ -0.49
SMARCAL1-209ENST00000444508 SMDT1Q9H4I9 107 aa11.99□□□□□ -0.49
SMARCAL1-209ENST00000444508 GAGE12JA6NER3 117 aa11.98□□□□□ -0.49
SMARCAL1-209ENST00000444508 TIRAPP58753 221 aa11.98□□□□□ -0.49
SMARCAL1-209ENST00000444508 ERVFC1-1P60608 527 aa11.98□□□□□ -0.49
SMARCAL1-209ENST00000444508 GAGE1Q13065 139 aa11.98□□□□□ -0.49
SMARCAL1-209ENST00000444508 GAGE4Q13068 117 aa11.98□□□□□ -0.49
SMARCAL1-209ENST00000444508 GAGE5Q13069 117 aa11.98□□□□□ -0.49
SMARCAL1-209ENST00000444508 ZNF56Q15929 161 aa11.98□□□□□ -0.49
SMARCAL1-209ENST00000444508 GAGE13Q4V321 117 aa11.98□□□□□ -0.49
SMARCAL1-209ENST00000444508 LINC01551Q86U37 167 aa11.98□□□□□ -0.49
SMARCAL1-209ENST00000444508 ATP6V0E2Q8NHE4 81 aa11.98□□□□□ -0.49
SMARCAL1-209ENST00000444508 RAB4BP61018 213 aa11.97□□□□□ -0.49
SMARCAL1-209ENST00000444508 SRSF3P84103 164 aaKnown RBP11.97□□□□□ -0.49
SMARCAL1-209ENST00000444508 C1orf134Q5TEV5 83 aa11.97□□□□□ -0.49
SMARCAL1-209ENST00000444508 LYZL1Q6UWQ5 148 aa11.97□□□□□ -0.49
SMARCAL1-209ENST00000444508 FRAS1Q86XX4 4008 aa11.97□□□□□ -0.49
SMARCAL1-209ENST00000444508 DNAH17Q9UFH2 4485 aa11.96□□□□□ -0.49
SMARCAL1-209ENST00000444508 F5H697 171 aa11.96□□□□□ -0.49
SMARCAL1-209ENST00000444508 TMEM241Q24JQ0 296 aa11.96□□□□□ -0.49
SMARCAL1-209ENST00000444508 LINC00336Q6ZUF6 198 aa11.96□□□□□ -0.49
SMARCAL1-209ENST00000444508 GTSF1LQ9H1H1 148 aa11.96□□□□□ -0.49
SMARCAL1-209ENST00000444508 TRBV10-1A0A0K0K1A3 114 aa11.95□□□□□ -0.5
SMARCAL1-209ENST00000444508 A8MWL6 223 aa11.95□□□□□ -0.5
SMARCAL1-209ENST00000444508 C9JQL5 133 aa11.95□□□□□ -0.5
SMARCAL1-209ENST00000444508 CTRLP40313 264 aa11.95□□□□□ -0.5
SMARCAL1-209ENST00000444508 WDR73Q6P4I2 378 aa11.95□□□□□ -0.5
SMARCAL1-209ENST00000444508 TRAV8-6A0A0B4J262 113 aa11.94□□□□□ -0.5
SMARCAL1-209ENST00000444508 TRGC1P0CF51 173 aa11.94□□□□□ -0.5
SMARCAL1-209ENST00000444508 LINC00694P0DN24 101 aa11.94□□□□□ -0.5
SMARCAL1-209ENST00000444508 CT83Q5H943 113 aa11.94□□□□□ -0.5
SMARCAL1-209ENST00000444508 WFDC10BQ8IUB3 73 aa11.94□□□□□ -0.5
SMARCAL1-209ENST00000444508 C6orf223Q8N319 242 aa11.94□□□□□ -0.5
SMARCAL1-209ENST00000444508 C15orf54Q8N8G6 183 aa11.94□□□□□ -0.5
SMARCAL1-209ENST00000444508 MSRB1Q9NZV6 116 aa11.94□□□□□ -0.5
SMARCAL1-209ENST00000444508 NAT8Q9UHE5 227 aa11.94□□□□□ -0.5
SMARCAL1-209ENST00000444508 RTL8CO15255 209 aa11.93□□□□□ -0.5
SMARCAL1-209ENST00000444508 NTF3P20783 257 aa11.93□□□□□ -0.5
SMARCAL1-209ENST00000444508 RPL36AP83881 106 aaKnown RBP11.93□□□□□ -0.5
SMARCAL1-209ENST00000444508 OR10J3Q5JRS4 329 aa11.93□□□□□ -0.5
SMARCAL1-209ENST00000444508 RPL36ALQ969Q0 106 aaKnown RBP11.93□□□□□ -0.5
SMARCAL1-209ENST00000444508 OSTCQ9NRP0 149 aa11.93□□□□□ -0.5
SMARCAL1-209ENST00000444508 Q9UF83 564 aa11.93□□□□□ -0.5
SMARCAL1-209ENST00000444508 KIF25-AS1Q9Y6Z4 181 aa11.93□□□□□ -0.5
SMARCAL1-209ENST00000444508 TRAV9-2A0A087WT02 112 aa11.92□□□□□ -0.5
SMARCAL1-209ENST00000444508 MGPP08493 103 aa11.92□□□□□ -0.5
SMARCAL1-209ENST00000444508 TWIST1Q15672 202 aa11.92□□□□□ -0.5
SMARCAL1-209ENST00000444508 ADIRFQ15847 76 aa11.92□□□□□ -0.5
SMARCAL1-209ENST00000444508 LELP1Q5T871 98 aa11.92□□□□□ -0.5
SMARCAL1-209ENST00000444508 GTSF1Q8WW33 167 aa11.92□□□□□ -0.5
SMARCAL1-209ENST00000444508 CNFNQ9BYD5 112 aa11.92□□□□□ -0.5
SMARCAL1-209ENST00000444508 KRTAP1-5Q9BYS1 174 aa11.92□□□□□ -0.5
SMARCAL1-209ENST00000444508 EVI2AP22794 236 aa11.91□□□□□ -0.5
SMARCAL1-209ENST00000444508 RPL23P62829 140 aaKnown RBP11.91□□□□□ -0.5
SMARCAL1-209ENST00000444508 CLLU1Q5K131 121 aa11.91□□□□□ -0.5
SMARCAL1-209ENST00000444508 ISOC2Q96AB3 205 aa11.91□□□□□ -0.5
SMARCAL1-209ENST00000444508 TRBV7-3A0A075B6L6 115 aa11.9□□□□□ -0.5
SMARCAL1-209ENST00000444508 A0A087WWC5 75 aa11.9□□□□□ -0.5
SMARCAL1-209ENST00000444508 IGHV3-38A0A0C4DH36 116 aa11.9□□□□□ -0.5
SMARCAL1-209ENST00000444508 PRSS29PA6NIE9 313 aa11.9□□□□□ -0.5
SMARCAL1-209ENST00000444508 K7EP13 123 aa11.9□□□□□ -0.5
SMARCAL1-209ENST00000444508 DNAH10OSP0CZ25 163 aa11.9□□□□□ -0.5
SMARCAL1-209ENST00000444508 BTF3P20290 206 aaKnown RBP11.9□□□□□ -0.5
SMARCAL1-209ENST00000444508 LINC00315P59091 139 aa11.9□□□□□ -0.5
SMARCAL1-209ENST00000444508 OR10G8Q8NGN5 311 aa11.9□□□□□ -0.5
SMARCAL1-209ENST00000444508 TSKUQ8WUA8 353 aa11.9□□□□□ -0.5
SMARCAL1-209ENST00000444508 BORCS7Q96B45 105 aa11.9□□□□□ -0.5
SMARCAL1-209ENST00000444508 PGLYRP4Q96LB8 373 aa11.9□□□□□ -0.5
SMARCAL1-209ENST00000444508 DPH3P1Q9H4G8 78 aa11.9□□□□□ -0.5
SMARCAL1-209ENST00000444508 BIRC6Q9NR09 4857 aa11.89□□□□□ -0.51
SMARCAL1-209ENST00000444508 H7C1H1 209 aa11.89□□□□□ -0.51
SMARCAL1-209ENST00000444508 UBE2D3P61077 147 aa11.89□□□□□ -0.51
SMARCAL1-209ENST00000444508 UBE2D2P62837 147 aa11.89□□□□□ -0.51
SMARCAL1-209ENST00000444508 SMIM15Q7Z3B0 74 aa11.89□□□□□ -0.51
SMARCAL1-209ENST00000444508 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms