RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 TMEM241Q24JQ0 296 aa7.5□□□□□ -1.21
HDAC6-211ENST00000443563 FAM74A4Q5TZK3 123 aa7.5□□□□□ -1.21
HDAC6-211ENST00000443563 LINC01551Q86U37 167 aa7.5□□□□□ -1.21
HDAC6-211ENST00000443563 OR10AG1Q8NH19 301 aa7.5□□□□□ -1.21
HDAC6-211ENST00000443563 AP1S3Q96PC3 154 aa7.5□□□□□ -1.21
HDAC6-211ENST00000443563 UPK3BQ9BT76 320 aa7.5□□□□□ -1.21
HDAC6-211ENST00000443563 TPPP3Q9BW30 176 aa7.5□□□□□ -1.21
HDAC6-211ENST00000443563 RNASE7Q9H1E1 156 aaKnown RBP7.5□□□□□ -1.21
HDAC6-211ENST00000443563 JPT2Q9H910 190 aa7.5□□□□□ -1.21
HDAC6-211ENST00000443563 A8MWL6 223 aa7.49□□□□□ -1.21
HDAC6-211ENST00000443563 CRYGDP07320 174 aa7.49□□□□□ -1.21
HDAC6-211ENST00000443563 GZMBP10144 247 aa7.49□□□□□ -1.21
HDAC6-211ENST00000443563 CLLU1Q5K131 121 aa7.49□□□□□ -1.21
HDAC6-211ENST00000443563 UFSP1Q6NVU6 142 aa7.49□□□□□ -1.21
HDAC6-211ENST00000443563 WDR73Q6P4I2 378 aa7.49□□□□□ -1.21
HDAC6-211ENST00000443563 ZNRF2Q8NHG8 242 aa7.49□□□□□ -1.21
HDAC6-211ENST00000443563 SAMD10Q9BYL1 202 aa7.49□□□□□ -1.21
HDAC6-211ENST00000443563 A0A087WWL8 130 aa7.48□□□□□ -1.21
HDAC6-211ENST00000443563 TRGC1P0CF51 173 aa7.48□□□□□ -1.21
HDAC6-211ENST00000443563 RAB4BP61018 213 aa7.48□□□□□ -1.21
HDAC6-211ENST00000443563 CT83Q5H943 113 aa7.48□□□□□ -1.21
HDAC6-211ENST00000443563 SOHLH1Q5JUK2 328 aa7.48□□□□□ -1.21
HDAC6-211ENST00000443563 LYPD5Q6UWN5 251 aa7.48□□□□□ -1.21
HDAC6-211ENST00000443563 LYZL1Q6UWQ5 148 aa7.48□□□□□ -1.21
HDAC6-211ENST00000443563 C15orf54Q8N8G6 183 aa7.48□□□□□ -1.21
HDAC6-211ENST00000443563 Q9H8V8 135 aa7.48□□□□□ -1.21
HDAC6-211ENST00000443563 OSTCQ9NRP0 149 aa7.48□□□□□ -1.21
HDAC6-211ENST00000443563 NAT8Q9UHE5 227 aa7.48□□□□□ -1.21
HDAC6-211ENST00000443563 DNAH17Q9UFH2 4485 aa7.47□□□□□ -1.21
HDAC6-211ENST00000443563 IGLV2-18A0A075B6J9 118 aa7.47□□□□□ -1.21
HDAC6-211ENST00000443563 TRBV10-1A0A0K0K1A3 114 aa7.47□□□□□ -1.21
HDAC6-211ENST00000443563 LOC100131303A0A0U1RQF7 123 aa7.47□□□□□ -1.21
HDAC6-211ENST00000443563 C9JQL5 133 aa7.47□□□□□ -1.21
HDAC6-211ENST00000443563 CTRLP40313 264 aa7.47□□□□□ -1.21
HDAC6-211ENST00000443563 TIRAPP58753 221 aa7.47□□□□□ -1.21
HDAC6-211ENST00000443563 SSTP61278 116 aa7.47□□□□□ -1.21
HDAC6-211ENST00000443563 SRSF3P84103 164 aaKnown RBP7.47□□□□□ -1.21
HDAC6-211ENST00000443563 ZNF56Q15929 161 aa7.47□□□□□ -1.21
HDAC6-211ENST00000443563 TTC32Q5I0X7 151 aa7.47□□□□□ -1.21
HDAC6-211ENST00000443563 MUC21A0A0G2JKD1 596 aa7.46□□□□□ -1.22
HDAC6-211ENST00000443563 NBDYA0A0U1RRE5 68 aa7.46□□□□□ -1.22
HDAC6-211ENST00000443563 MUC21A0A140T8X8 626 aa7.46□□□□□ -1.22
HDAC6-211ENST00000443563 FAM231BA6NCW3 169 aa7.46□□□□□ -1.22
HDAC6-211ENST00000443563 M0R2N4 97 aa7.46□□□□□ -1.22
HDAC6-211ENST00000443563 SIVA1O15304 175 aa7.46□□□□□ -1.22
HDAC6-211ENST00000443563 RPL23P62829 140 aaKnown RBP7.46□□□□□ -1.22
HDAC6-211ENST00000443563 ADIRFQ15847 76 aa7.46□□□□□ -1.22
HDAC6-211ENST00000443563 Q6ZSN1 163 aa7.46□□□□□ -1.22
HDAC6-211ENST00000443563 SMIM15Q7Z3B0 74 aa7.46□□□□□ -1.22
HDAC6-211ENST00000443563 C14orf178Q8N769 122 aaPredicted RBP7.46□□□□□ -1.22
HDAC6-211ENST00000443563 ATP6V0E2Q8NHE4 81 aa7.46□□□□□ -1.22
HDAC6-211ENST00000443563 ISOC2Q96AB3 205 aa7.46□□□□□ -1.22
HDAC6-211ENST00000443563 BORCS7Q96B45 105 aa7.46□□□□□ -1.22
HDAC6-211ENST00000443563 GFRA4Q9GZZ7 299 aa7.46□□□□□ -1.22
HDAC6-211ENST00000443563 GAGE12JA6NER3 117 aa7.45□□□□□ -1.22
HDAC6-211ENST00000443563 F5H697 171 aa7.45□□□□□ -1.22
HDAC6-211ENST00000443563 H7C1H1 209 aa7.45□□□□□ -1.22
HDAC6-211ENST00000443563 NTF3P20783 257 aa7.45□□□□□ -1.22
HDAC6-211ENST00000443563 FOXA3P55318 350 aaPredicted RBP7.45□□□□□ -1.22
HDAC6-211ENST00000443563 RPL36AP83881 106 aaKnown RBP7.45□□□□□ -1.22
HDAC6-211ENST00000443563 IFITM2Q01629 132 aa7.45□□□□□ -1.22
HDAC6-211ENST00000443563 GAGE1Q13065 139 aa7.45□□□□□ -1.22
HDAC6-211ENST00000443563 GAGE4Q13068 117 aa7.45□□□□□ -1.22
HDAC6-211ENST00000443563 GAGE5Q13069 117 aa7.45□□□□□ -1.22
HDAC6-211ENST00000443563 GAGE13Q4V321 117 aa7.45□□□□□ -1.22
HDAC6-211ENST00000443563 Q6ZR54 194 aa7.45□□□□□ -1.22
HDAC6-211ENST00000443563 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.45□□□□□ -1.22
HDAC6-211ENST00000443563 TSKUQ8WUA8 353 aa7.45□□□□□ -1.22
HDAC6-211ENST00000443563 RPL36ALQ969Q0 106 aaKnown RBP7.45□□□□□ -1.22
HDAC6-211ENST00000443563 CNFNQ9BYD5 112 aa7.45□□□□□ -1.22
HDAC6-211ENST00000443563 GTSF1LQ9H1H1 148 aa7.45□□□□□ -1.22
HDAC6-211ENST00000443563 TRAV9-2A0A087WT02 112 aa7.44□□□□□ -1.22
HDAC6-211ENST00000443563 A0A087WWC5 75 aa7.44□□□□□ -1.22
HDAC6-211ENST00000443563 TRAV8-6A0A0B4J262 113 aa7.44□□□□□ -1.22
HDAC6-211ENST00000443563 K7EP13 123 aa7.44□□□□□ -1.22
HDAC6-211ENST00000443563 BTF3P20290 206 aaKnown RBP7.44□□□□□ -1.22
HDAC6-211ENST00000443563 TWIST1Q15672 202 aa7.44□□□□□ -1.22
HDAC6-211ENST00000443563 LINC00336Q6ZUF6 198 aa7.44□□□□□ -1.22
HDAC6-211ENST00000443563 OR10G8Q8NGN5 311 aa7.44□□□□□ -1.22
HDAC6-211ENST00000443563 GTSF1Q8WW33 167 aa7.44□□□□□ -1.22
HDAC6-211ENST00000443563 DPH3P1Q9H4G8 78 aa7.44□□□□□ -1.22
HDAC6-211ENST00000443563 KIF25-AS1Q9Y6Z4 181 aa7.44□□□□□ -1.22
HDAC6-211ENST00000443563 TRBV7-3A0A075B6L6 115 aa7.43□□□□□ -1.22
HDAC6-211ENST00000443563 MGPP08493 103 aa7.43□□□□□ -1.22
HDAC6-211ENST00000443563 LINC00694P0DN24 101 aa7.43□□□□□ -1.22
HDAC6-211ENST00000443563 OR10J3Q5JRS4 329 aa7.43□□□□□ -1.22
HDAC6-211ENST00000443563 LELP1Q5T871 98 aa7.43□□□□□ -1.22
HDAC6-211ENST00000443563 C1orf134Q5TEV5 83 aa7.43□□□□□ -1.22
HDAC6-211ENST00000443563 UQCC3Q6UW78 93 aa7.43□□□□□ -1.22
HDAC6-211ENST00000443563 PGLYRP4Q96LB8 373 aa7.43□□□□□ -1.22
HDAC6-211ENST00000443563 MSRB1Q9NZV6 116 aa7.43□□□□□ -1.22
HDAC6-211ENST00000443563 FAT2Q9NYQ8 4349 aa7.42□□□□□ -1.22
HDAC6-211ENST00000443563 A0A1B0GUT8 65 aa7.42□□□□□ -1.22
HDAC6-211ENST00000443563 HIGD1CA8MV81 97 aa7.42□□□□□ -1.22
HDAC6-211ENST00000443563 EVI2AP22794 236 aa7.42□□□□□ -1.22
HDAC6-211ENST00000443563 PNRC1Q12796 327 aaPredicted RBP7.42□□□□□ -1.22
HDAC6-211ENST00000443563 DNAJC30Q96LL9 226 aa7.42□□□□□ -1.22
HDAC6-211ENST00000443563 V9GYV3 84 aa7.42□□□□□ -1.22
HDAC6-211ENST00000443563 PPP1R2P9O14990 202 aa7.41□□□□□ -1.22
HDAC6-211ENST00000443563 DNAH10OSP0CZ25 163 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms