RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 DLX4Q92988 240 aaPredicted RBP11.5□□□□□ -0.57
CDC42EP4-202ENST00000439510 UBTD1Q9HAC8 227 aa11.5□□□□□ -0.57
CDC42EP4-202ENST00000439510 FBN2P35556 2912 aa11.49□□□□□ -0.57
CDC42EP4-202ENST00000439510 SCGB1D4Q6XE38 83 aa11.49□□□□□ -0.57
CDC42EP4-202ENST00000439510 KIF25-AS1Q9Y6Z4 181 aa11.49□□□□□ -0.57
CDC42EP4-202ENST00000439510 IGLV4-69A0A075B6H9 119 aa11.49□□□□□ -0.57
CDC42EP4-202ENST00000439510 IGHV4OR15-8A0A075B7B6 117 aa11.49□□□□□ -0.57
CDC42EP4-202ENST00000439510 A0A087WW49 117 aa11.49□□□□□ -0.57
CDC42EP4-202ENST00000439510 LINC01549A6NIU2 74 aa11.49□□□□□ -0.57
CDC42EP4-202ENST00000439510 RNASE4P34096 147 aaKnown RBP11.49□□□□□ -0.57
CDC42EP4-202ENST00000439510 LCNL1Q6ZST4 164 aa11.49□□□□□ -0.57
CDC42EP4-202ENST00000439510 TMEM219Q86XT9 240 aa11.49□□□□□ -0.57
CDC42EP4-202ENST00000439510 SS18L2Q9UHA2 77 aa11.49□□□□□ -0.57
CDC42EP4-202ENST00000439510 MUC4Q99102 2169 aa11.49□□□□□ -0.57
CDC42EP4-202ENST00000439510 GNRH2O43555 120 aa11.48□□□□□ -0.57
CDC42EP4-202ENST00000439510 DUSP14O95147 198 aaKnown RBP11.48□□□□□ -0.57
CDC42EP4-202ENST00000439510 APOMO95445 188 aa11.48□□□□□ -0.57
CDC42EP4-202ENST00000439510 TSHBP01222 138 aa11.48□□□□□ -0.57
CDC42EP4-202ENST00000439510 TRBV12-3P01733 135 aa11.48□□□□□ -0.57
CDC42EP4-202ENST00000439510 CD7P09564 240 aa11.48□□□□□ -0.57
CDC42EP4-202ENST00000439510 LINC00315P59091 139 aa11.48□□□□□ -0.57
CDC42EP4-202ENST00000439510 DEFB1P60022 68 aa11.48□□□□□ -0.57
CDC42EP4-202ENST00000439510 C1QTNF4Q9BXJ3 329 aa11.48□□□□□ -0.57
CDC42EP4-202ENST00000439510 TSPAN13O95857 204 aa11.48□□□□□ -0.57
CDC42EP4-202ENST00000439510 SMCPP49901 116 aaPredicted RBP11.48□□□□□ -0.57
CDC42EP4-202ENST00000439510 PAPPA-AS1Q5QFB9 102 aa11.48□□□□□ -0.57
CDC42EP4-202ENST00000439510 IGIPA6NJ69 53 aa11.47□□□□□ -0.57
CDC42EP4-202ENST00000439510 UBE2D3P61077 147 aa11.47□□□□□ -0.57
CDC42EP4-202ENST00000439510 UBE2D2P62837 147 aa11.47□□□□□ -0.57
CDC42EP4-202ENST00000439510 GCN1Q92616 2671 aaKnown RBP11.47□□□□□ -0.57
CDC42EP4-202ENST00000439510 C11orf86A6NJI1 115 aa11.47□□□□□ -0.57
CDC42EP4-202ENST00000439510 FOXI1Q12951 378 aa11.47□□□□□ -0.57
CDC42EP4-202ENST00000439510 SRSF9Q13242 221 aaKnown RBP eCLIP11.47□□□□□ -0.57
CDC42EP4-202ENST00000439510 LINC00527Q9UJ94 153 aa11.47□□□□□ -0.57
CDC42EP4-202ENST00000439510 CELSR1Q9NYQ6 3014 aa11.46□□□□□ -0.57
CDC42EP4-202ENST00000439510 CKS1BP61024 79 aa11.46□□□□□ -0.57
CDC42EP4-202ENST00000439510 PTPN13Q12923 2485 aa11.46□□□□□ -0.57
CDC42EP4-202ENST00000439510 KLHL30-AS1Q8NEE0 82 aa11.46□□□□□ -0.57
CDC42EP4-202ENST00000439510 A0A0J9YY99 117 aa11.46□□□□□ -0.58
CDC42EP4-202ENST00000439510 POLR2KP53803 58 aaKnown RBP11.46□□□□□ -0.58
CDC42EP4-202ENST00000439510 TP53TG1Q9Y2A0 90 aa11.46□□□□□ -0.58
CDC42EP4-202ENST00000439510 F6UB75 175 aa11.45□□□□□ -0.58
CDC42EP4-202ENST00000439510 HERVK_113P61574 105 aa11.45□□□□□ -0.58
CDC42EP4-202ENST00000439510 PMVKQ15126 192 aa11.45□□□□□ -0.58
CDC42EP4-202ENST00000439510 ZFP2Q6ZN57 461 aa11.45□□□□□ -0.58
CDC42EP4-202ENST00000439510 BPESC1Q9GZL8 116 aa11.45□□□□□ -0.58
CDC42EP4-202ENST00000439510 TMEM141Q96I45 108 aa11.45□□□□□ -0.58
CDC42EP4-202ENST00000439510 NDUFA11Q86Y39 141 aa11.44□□□□□ -0.58
CDC42EP4-202ENST00000439510 KLLNB2CW77 178 aa11.44□□□□□ -0.58
CDC42EP4-202ENST00000439510 TIMM17AQ99595 171 aa11.44□□□□□ -0.58
CDC42EP4-202ENST00000439510 TNFRSF18Q9Y5U5 241 aa11.44□□□□□ -0.58
CDC42EP4-202ENST00000439510 ZFHX3Q15911 3703 aa11.43□□□□□ -0.58
CDC42EP4-202ENST00000439510 LYRM7Q5U5X0 104 aa11.43□□□□□ -0.58
CDC42EP4-202ENST00000439510 USMG5Q96IX5 58 aa11.43□□□□□ -0.58
CDC42EP4-202ENST00000439510 H3BUA1 57 aa11.43□□□□□ -0.58
CDC42EP4-202ENST00000439510 TCTEX1D4Q5JR98 221 aa11.43□□□□□ -0.58
CDC42EP4-202ENST00000439510 NFE4Q86UQ8 179 aa11.43□□□□□ -0.58
CDC42EP4-202ENST00000439510 ANKRD17O75179 2603 aaKnown RBP11.43□□□□□ -0.58
CDC42EP4-202ENST00000439510 LOC107984156A0A0G2JMH3 177 aa11.42□□□□□ -0.58
CDC42EP4-202ENST00000439510 VCYO14598 125 aa11.42□□□□□ -0.58
CDC42EP4-202ENST00000439510 PSMB2P49721 201 aa11.42□□□□□ -0.58
CDC42EP4-202ENST00000439510 SUMO4Q6EEV6 95 aa11.42□□□□□ -0.58
CDC42EP4-202ENST00000439510 ARL17AQ8IVW1 177 aa11.42□□□□□ -0.58
CDC42EP4-202ENST00000439510 FASNP49327 2511 aaKnown RBP11.42□□□□□ -0.58
CDC42EP4-202ENST00000439510 RPL11P62913 178 aaKnown RBP11.42□□□□□ -0.58
CDC42EP4-202ENST00000439510 CDIP1Q9H305 208 aa11.42□□□□□ -0.58
CDC42EP4-202ENST00000439510 IGHV3-30P01768 117 aa11.42□□□□□ -0.58
CDC42EP4-202ENST00000439510 IGHV3-30-5P0DP03 117 aa11.42□□□□□ -0.58
CDC42EP4-202ENST00000439510 SLC25A29Q8N8R3 303 aa11.42□□□□□ -0.58
CDC42EP4-202ENST00000439510 KIR2DL4Q99706 377 aa11.42□□□□□ -0.58
CDC42EP4-202ENST00000439510 EMP1P54849 157 aa11.41□□□□□ -0.58
CDC42EP4-202ENST00000439510 TSPEAR-AS2P59090 65 aa11.41□□□□□ -0.58
CDC42EP4-202ENST00000439510 RPL39P62891 51 aaKnown RBP11.41□□□□□ -0.58
CDC42EP4-202ENST00000439510 NRGNQ92686 78 aa11.41□□□□□ -0.58
CDC42EP4-202ENST00000439510 ZNF876PQ49A33 203 aa11.41□□□□□ -0.58
CDC42EP4-202ENST00000439510 SYT8Q8NBV8 401 aa11.41□□□□□ -0.58
CDC42EP4-202ENST00000439510 AMELXQ99217 191 aa11.41□□□□□ -0.58
CDC42EP4-202ENST00000439510 RHPN1-AS1Q9BWJ2 59 aa11.41□□□□□ -0.58
CDC42EP4-202ENST00000439510 TRBV27A0A0K0K1C4 114 aa11.4□□□□□ -0.58
CDC42EP4-202ENST00000439510 IGHV1-69P01742 117 aa11.4□□□□□ -0.58
CDC42EP4-202ENST00000439510 Q6ZS46 218 aa11.4□□□□□ -0.58
CDC42EP4-202ENST00000439510 FAM110AQ9BQ89 295 aa11.4□□□□□ -0.58
CDC42EP4-202ENST00000439510 JPT2Q9H910 190 aa11.4□□□□□ -0.58
CDC42EP4-202ENST00000439510 TRBV20-1A0A075B6N2 111 aa11.4□□□□□ -0.58
CDC42EP4-202ENST00000439510 TRBV6-5A0A0K0K1A5 114 aa11.4□□□□□ -0.58
CDC42EP4-202ENST00000439510 CFC1BP0CG36 223 aa11.4□□□□□ -0.58
CDC42EP4-202ENST00000439510 CFC1P0CG37 223 aa11.4□□□□□ -0.58
CDC42EP4-202ENST00000439510 FAM159AQ6UWV7 190 aa11.4□□□□□ -0.58
CDC42EP4-202ENST00000439510 SBSPONQ8IVN8 264 aa11.4□□□□□ -0.58
CDC42EP4-202ENST00000439510 ZNRF2Q8NHG8 242 aa11.4□□□□□ -0.58
CDC42EP4-202ENST00000439510 LGALS9O00182 355 aa11.39□□□□□ -0.59
CDC42EP4-202ENST00000439510 SFTA2Q6UW10 78 aa11.39□□□□□ -0.59
CDC42EP4-202ENST00000439510 IGHV3OR16-10A0A075B7F0 116 aa11.39□□□□□ -0.59
CDC42EP4-202ENST00000439510 SDHAF1A6NFY7 115 aa11.39□□□□□ -0.59
CDC42EP4-202ENST00000439510 IGHV3-11P01762 117 aa11.39□□□□□ -0.59
CDC42EP4-202ENST00000439510 IGHG2P01859 326 aa11.39□□□□□ -0.59
CDC42EP4-202ENST00000439510 ABCA2Q9BZC7 2435 aa11.39□□□□□ -0.59
CDC42EP4-202ENST00000439510 TCL1BO95988 128 aa11.38□□□□□ -0.59
CDC42EP4-202ENST00000439510 TEN1Q86WV5 123 aa11.38□□□□□ -0.59
CDC42EP4-202ENST00000439510 C10orf126Q8N4M7 172 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms