RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 RETNQ9HD89 108 aa6.93□□□□□ -1.3
CUBN-204ENST00000438254 TIMM8BQ9Y5J9 83 aaPredicted RBP6.93□□□□□ -1.3
CUBN-204ENST00000438254 IGHV4-28A0A0C4DH34 117 aa6.92□□□□□ -1.3
CUBN-204ENST00000438254 M0R381 172 aa6.92□□□□□ -1.3
CUBN-204ENST00000438254 CRYGDP07320 174 aa6.92□□□□□ -1.3
CUBN-204ENST00000438254 SPANXN1Q5VSR9 72 aa6.92□□□□□ -1.3
CUBN-204ENST00000438254 UFSP1Q6NVU6 142 aa6.92□□□□□ -1.3
CUBN-204ENST00000438254 POM121L12Q8N7R1 296 aa6.92□□□□□ -1.3
CUBN-204ENST00000438254 BORCS7Q96B45 105 aa6.92□□□□□ -1.3
CUBN-204ENST00000438254 RNF185Q96GF1 192 aa6.92□□□□□ -1.3
CUBN-204ENST00000438254 C18orf15Q96N68 181 aa6.92□□□□□ -1.3
CUBN-204ENST00000438254 MEGF8Q7Z7M0 2845 aa6.92□□□□□ -1.3
CUBN-204ENST00000438254 KRTAP9-7A8MTY7 169 aa6.91□□□□□ -1.3
CUBN-204ENST00000438254 SNURFLB1AK76 121 aa6.91□□□□□ -1.3
CUBN-204ENST00000438254 S100A8P05109 93 aa6.91□□□□□ -1.3
CUBN-204ENST00000438254 EVI2AP22794 236 aa6.91□□□□□ -1.3
CUBN-204ENST00000438254 CAMPP49913 170 aa6.91□□□□□ -1.3
CUBN-204ENST00000438254 TWIST1Q15672 202 aa6.91□□□□□ -1.3
CUBN-204ENST00000438254 ZNF876PQ49A33 203 aa6.91□□□□□ -1.3
CUBN-204ENST00000438254 DEFB121Q5J5C9 76 aa6.91□□□□□ -1.3
CUBN-204ENST00000438254 SYT8Q8NBV8 401 aa6.91□□□□□ -1.3
CUBN-204ENST00000438254 MRAPQ8TCY5 172 aa6.91□□□□□ -1.3
CUBN-204ENST00000438254 B9D2Q9BPU9 175 aa6.91□□□□□ -1.3
CUBN-204ENST00000438254 C11orf68Q9H3H3 251 aaKnown RBP6.91□□□□□ -1.3
CUBN-204ENST00000438254 JPT2Q9H910 190 aa6.91□□□□□ -1.3
CUBN-204ENST00000438254 NOP10Q9NPE3 64 aaKnown RBP6.91□□□□□ -1.3
CUBN-204ENST00000438254 MRPL16Q9NX20 251 aaKnown RBP6.91□□□□□ -1.3
CUBN-204ENST00000438254 PRKDCP78527 4128 aaKnown RBP6.9□□□□□ -1.3
CUBN-204ENST00000438254 HLA-DQA1P01909 254 aa6.9□□□□□ -1.3
CUBN-204ENST00000438254 MT-ND6P03923 174 aa6.9□□□□□ -1.3
CUBN-204ENST00000438254 TRGC1P0CF51 173 aa6.9□□□□□ -1.3
CUBN-204ENST00000438254 SSTP61278 116 aa6.9□□□□□ -1.3
CUBN-204ENST00000438254 SLAQ13239 276 aa6.9□□□□□ -1.3
CUBN-204ENST00000438254 FAM104BQ5XKR9 115 aa6.9□□□□□ -1.3
CUBN-204ENST00000438254 Q6ZTI0 123 aa6.9□□□□□ -1.3
CUBN-204ENST00000438254 AP1S3Q96PC3 154 aa6.9□□□□□ -1.3
CUBN-204ENST00000438254 SPATA25Q9BR10 227 aa6.9□□□□□ -1.3
CUBN-204ENST00000438254 SAMD10Q9BYL1 202 aa6.9□□□□□ -1.3
CUBN-204ENST00000438254 DKK2Q9UBU2 259 aa6.9□□□□□ -1.3
CUBN-204ENST00000438254 TENM3Q9P273 2699 aa6.9□□□□□ -1.31
CUBN-204ENST00000438254 NACAE9PAV3 2078 aa6.89□□□□□ -1.31
CUBN-204ENST00000438254 LYRM9A8MSI8 78 aa6.89□□□□□ -1.31
CUBN-204ENST00000438254 RS1O15537 224 aa6.89□□□□□ -1.31
CUBN-204ENST00000438254 TRGC2P03986 189 aa6.89□□□□□ -1.31
CUBN-204ENST00000438254 RAB4AP20338 218 aa6.89□□□□□ -1.31
CUBN-204ENST00000438254 CFAP126Q5VTH2 177 aa6.89□□□□□ -1.31
CUBN-204ENST00000438254 AMN1Q8IY45 258 aa6.89□□□□□ -1.31
CUBN-204ENST00000438254 C14orf178Q8N769 122 aaPredicted RBP6.89□□□□□ -1.31
CUBN-204ENST00000438254 DPH3P1Q9H4G8 78 aa6.89□□□□□ -1.31
CUBN-204ENST00000438254 TRGV1A0A0A0MS02 117 aa6.88□□□□□ -1.31
CUBN-204ENST00000438254 A8MWV9 139 aa6.88□□□□□ -1.31
CUBN-204ENST00000438254 DEFB4AO15263 64 aa6.88□□□□□ -1.31
CUBN-204ENST00000438254 RPS10P46783 165 aaKnown RBP6.88□□□□□ -1.31
CUBN-204ENST00000438254 DEFA6Q01524 100 aa6.88□□□□□ -1.31
CUBN-204ENST00000438254 MRPL51Q4U2R6 128 aaKnown RBP6.88□□□□□ -1.31
CUBN-204ENST00000438254 FAM222AQ5U5X8 452 aa6.88□□□□□ -1.31
CUBN-204ENST00000438254 EDA2RQ9HAV5 297 aa6.88□□□□□ -1.31
CUBN-204ENST00000438254 CELA1Q9UNI1 258 aa6.88□□□□□ -1.31
CUBN-204ENST00000438254 TRAPPC1Q9Y5R8 145 aa6.88□□□□□ -1.31
CUBN-204ENST00000438254 U3KQK5 164 aa6.88□□□□□ -1.31
CUBN-204ENST00000438254 A0A087WWL8 130 aa6.87□□□□□ -1.31
CUBN-204ENST00000438254 TRAV4A0A0B4J268 109 aa6.87□□□□□ -1.31
CUBN-204ENST00000438254 GAS8-AS1O95177 125 aa6.87□□□□□ -1.31
CUBN-204ENST00000438254 EMP1P54849 157 aa6.87□□□□□ -1.31
CUBN-204ENST00000438254 FABP9Q0Z7S8 132 aa6.87□□□□□ -1.31
CUBN-204ENST00000438254 LCE5AQ5TCM9 118 aa6.87□□□□□ -1.31
CUBN-204ENST00000438254 ZFP2Q6ZN57 461 aa6.87□□□□□ -1.31
CUBN-204ENST00000438254 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.87□□□□□ -1.31
CUBN-204ENST00000438254 FRZBQ92765 325 aa6.87□□□□□ -1.31
CUBN-204ENST00000438254 GAGE12BA1L429 117 aa6.86□□□□□ -1.31
CUBN-204ENST00000438254 RHODO00212 210 aa6.86□□□□□ -1.31
CUBN-204ENST00000438254 GAGE7O76087 117 aa6.86□□□□□ -1.31
CUBN-204ENST00000438254 APCSP02743 223 aa6.86□□□□□ -1.31
CUBN-204ENST00000438254 GAGE12FP0CL80 117 aa6.86□□□□□ -1.31
CUBN-204ENST00000438254 GAGE12GP0CL81 117 aa6.86□□□□□ -1.31
CUBN-204ENST00000438254 GAGE12IP0CL82 117 aa6.86□□□□□ -1.31
CUBN-204ENST00000438254 SPART-AS1P0CW21 52 aa6.86□□□□□ -1.31
CUBN-204ENST00000438254 RAB4BP61018 213 aa6.86□□□□□ -1.31
CUBN-204ENST00000438254 ZNF479Q96JC4 524 aa6.86□□□□□ -1.31
CUBN-204ENST00000438254 COL7A1Q02388 2944 aa6.86□□□□□ -1.31
CUBN-204ENST00000438254 A0A0J9YWU9 116 aa6.85□□□□□ -1.31
CUBN-204ENST00000438254 CIDEAO60543 219 aa6.85□□□□□ -1.31
CUBN-204ENST00000438254 IGHV3-53P01767 116 aa6.85□□□□□ -1.31
CUBN-204ENST00000438254 KIAA1644Q3SXP7 199 aa6.85□□□□□ -1.31
CUBN-204ENST00000438254 Q6ZSN1 163 aa6.85□□□□□ -1.31
CUBN-204ENST00000438254 SMIM15Q7Z3B0 74 aa6.85□□□□□ -1.31
CUBN-204ENST00000438254 NRACQ8N912 160 aa6.85□□□□□ -1.31
CUBN-204ENST00000438254 MRAP2Q96G30 205 aa6.85□□□□□ -1.31
CUBN-204ENST00000438254 ALKBH7Q9BT30 221 aaPredicted RBP6.85□□□□□ -1.31
CUBN-204ENST00000438254 TRAV26-2A0A0B4J265 109 aa6.84□□□□□ -1.31
CUBN-204ENST00000438254 TEX48A0A1B0GUV7 120 aa6.84□□□□□ -1.31
CUBN-204ENST00000438254 D6R8Y8 96 aa6.84□□□□□ -1.31
CUBN-204ENST00000438254 M0QY20 66 aa6.84□□□□□ -1.31
CUBN-204ENST00000438254 PPBPP02775 128 aa6.84□□□□□ -1.31
CUBN-204ENST00000438254 NHLRC4P0CG21 123 aaPredicted RBP6.84□□□□□ -1.31
CUBN-204ENST00000438254 SMIM17P0DL12 118 aa6.84□□□□□ -1.31
CUBN-204ENST00000438254 GATA1P15976 413 aaPredicted RBP6.84□□□□□ -1.31
CUBN-204ENST00000438254 FHL2Q14192 279 aa6.84□□□□□ -1.31
CUBN-204ENST00000438254 C12orf74Q32Q52 190 aa6.84□□□□□ -1.31
CUBN-204ENST00000438254 FAM74A4Q5TZK3 123 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms