RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 RPL39P62891 51 aaKnown RBP12.1□□□□□ -0.47
C9orf3-206ENST00000428313 IGHV3-23P01764 117 aa12.09□□□□□ -0.47
C9orf3-206ENST00000428313 S100A4P26447 101 aaKnown RBP12.09□□□□□ -0.47
C9orf3-206ENST00000428313 PRR9Q5T870 116 aa12.09□□□□□ -0.47
C9orf3-206ENST00000428313 SMCR5Q8TEV8 140 aa12.09□□□□□ -0.47
C9orf3-206ENST00000428313 DCANP1Q8TF63 244 aa12.09□□□□□ -0.47
C9orf3-206ENST00000428313 CLEC2BQ92478 149 aa12.09□□□□□ -0.47
C9orf3-206ENST00000428313 LITAFQ99732 161 aa12.09□□□□□ -0.47
C9orf3-206ENST00000428313 IGFL2Q6UWQ7 119 aa12.09□□□□□ -0.47
C9orf3-206ENST00000428313 CCL17Q92583 94 aa12.09□□□□□ -0.47
C9orf3-206ENST00000428313 SEM1Q6ZVN7 128 aa12.08□□□□□ -0.48
C9orf3-206ENST00000428313 URB1O60287 2271 aaKnown RBP12.08□□□□□ -0.48
C9orf3-206ENST00000428313 ATOX1O00244 68 aa12.08□□□□□ -0.48
C9orf3-206ENST00000428313 OVOL1O14753 267 aa12.08□□□□□ -0.48
C9orf3-206ENST00000428313 HIST1H4AP62805 103 aaKnown RBP12.08□□□□□ -0.48
C9orf3-206ENST00000428313 TRAV21A0A0B4J279 112 aa12.07□□□□□ -0.48
C9orf3-206ENST00000428313 I3L3M4 83 aa12.07□□□□□ -0.48
C9orf3-206ENST00000428313 NXPH4O95158 308 aa12.07□□□□□ -0.48
C9orf3-206ENST00000428313 TMEM258P61165 79 aa12.07□□□□□ -0.48
C9orf3-206ENST00000428313 CDX4O14627 284 aaPredicted RBP12.07□□□□□ -0.48
C9orf3-206ENST00000428313 COX7A1P24310 79 aa12.07□□□□□ -0.48
C9orf3-206ENST00000428313 PEMTQ9UBM1 199 aa12.07□□□□□ -0.48
C9orf3-206ENST00000428313 KIF25-AS1Q9Y6Z4 181 aa12.06□□□□□ -0.48
C9orf3-206ENST00000428313 TRACP01848 142 aa12.06□□□□□ -0.48
C9orf3-206ENST00000428313 LINC00315P59091 139 aa12.06□□□□□ -0.48
C9orf3-206ENST00000428313 PRO3102Q9H379 93 aa12.05□□□□□ -0.48
C9orf3-206ENST00000428313 IGHV3OR16-8A0A075B7F1 116 aa12.04□□□□□ -0.48
C9orf3-206ENST00000428313 TRAV8-3A0A0A6YYJ7 113 aa12.04□□□□□ -0.48
C9orf3-206ENST00000428313 TRBV27A0A0K0K1C4 114 aa12.04□□□□□ -0.48
C9orf3-206ENST00000428313 PRB3Q04118 309 aaPredicted RBP12.04□□□□□ -0.48
C9orf3-206ENST00000428313 MIAQ16674 131 aa12.04□□□□□ -0.48
C9orf3-206ENST00000428313 TMEM61Q8N0U2 210 aa12.04□□□□□ -0.48
C9orf3-206ENST00000428313 TRBV6-5A0A0K0K1A5 114 aa12.03□□□□□ -0.48
C9orf3-206ENST00000428313 RHOHQ15669 191 aa12.03□□□□□ -0.48
C9orf3-206ENST00000428313 NSUN5P1Q3KNT7 163 aa12.03□□□□□ -0.48
C9orf3-206ENST00000428313 ATP1A1-AS1Q5TC04 95 aa12.03□□□□□ -0.48
C9orf3-206ENST00000428313 ZFAND2AQ8N6M9 145 aa12.03□□□□□ -0.48
C9orf3-206ENST00000428313 DPH3Q96FX2 82 aa12.03□□□□□ -0.48
C9orf3-206ENST00000428313 LINC00477Q96M19 166 aa12.03□□□□□ -0.48
C9orf3-206ENST00000428313 CLPSL1A2RUU4 121 aa12.03□□□□□ -0.48
C9orf3-206ENST00000428313 SPRY2O43597 315 aa12.03□□□□□ -0.48
C9orf3-206ENST00000428313 EEF1AKMT3Q96AZ1 226 aa12.03□□□□□ -0.48
C9orf3-206ENST00000428313 ARRDC1-AS1Q9H2J1 176 aa12.03□□□□□ -0.48
C9orf3-206ENST00000428313 PRSS2P07478 247 aa12.02□□□□□ -0.49
C9orf3-206ENST00000428313 NDPQ00604 133 aa12.02□□□□□ -0.49
C9orf3-206ENST00000428313 TIMM21Q9BVV7 248 aa12.02□□□□□ -0.49
C9orf3-206ENST00000428313 CELSR3Q9NYQ7 3312 aa12.02□□□□□ -0.49
C9orf3-206ENST00000428313 IGHV3-64A0A075B6Q5 118 aa12.02□□□□□ -0.49
C9orf3-206ENST00000428313 hADV29S1A0JD25 119 aa12.02□□□□□ -0.49
C9orf3-206ENST00000428313 IGHV3-30-3P0DP02 117 aa12.02□□□□□ -0.49
C9orf3-206ENST00000428313 SUMO4Q6EEV6 95 aa12.02□□□□□ -0.49
C9orf3-206ENST00000428313 DAND5Q8N907 189 aa12.02□□□□□ -0.49
C9orf3-206ENST00000428313 IGHV3-35A0A0C4DH35 117 aa12.01□□□□□ -0.49
C9orf3-206ENST00000428313 F5H768 121 aa12.01□□□□□ -0.49
C9orf3-206ENST00000428313 RNASE3P12724 160 aaKnown RBP12.01□□□□□ -0.49
C9orf3-206ENST00000428313 MRAPQ8TCY5 172 aa12.01□□□□□ -0.49
C9orf3-206ENST00000428313 C22orf34Q6ZV56 151 aa12□□□□□ -0.49
C9orf3-206ENST00000428313 CUL9Q8IWT3 2517 aa12□□□□□ -0.49
C9orf3-206ENST00000428313 C9orf139Q6ZV77 190 aa12□□□□□ -0.49
C9orf3-206ENST00000428313 ITLN2Q8WWU7 325 aaPredicted RBP12□□□□□ -0.49
C9orf3-206ENST00000428313 DYNLRB1Q9NP97 96 aa12□□□□□ -0.49
C9orf3-206ENST00000428313 DPM3Q9P2X0 92 aa12□□□□□ -0.49
C9orf3-206ENST00000428313 TRBV7-1A0A0A6YYK4 115 aa11.99□□□□□ -0.49
C9orf3-206ENST00000428313 IGHV3-66A0A0C4DH42 116 aa11.99□□□□□ -0.49
C9orf3-206ENST00000428313 IGF1P05019 195 aa11.99□□□□□ -0.49
C9orf3-206ENST00000428313 ADAMTSL4-AS1Q5T5F5 129 aa11.99□□□□□ -0.49
C9orf3-206ENST00000428313 TRAV41A0A0B4J266 112 aa11.99□□□□□ -0.49
C9orf3-206ENST00000428313 LPAL2Q16609 132 aa11.99□□□□□ -0.49
C9orf3-206ENST00000428313 PLA2G2CQ5R387 149 aa11.99□□□□□ -0.49
C9orf3-206ENST00000428313 A0A0J9YXV3 536 aa11.98□□□□□ -0.49
C9orf3-206ENST00000428313 KLK9Q2XQG4 91 aa11.98□□□□□ -0.49
C9orf3-206ENST00000428313 FDCSPQ8NFU4 85 aa11.98□□□□□ -0.49
C9orf3-206ENST00000428313 C16orf92Q96LL3 132 aa11.98□□□□□ -0.49
C9orf3-206ENST00000428313 KLK9Q9UKQ9 250 aa11.98□□□□□ -0.49
C9orf3-206ENST00000428313 U3KQE9 123 aa11.98□□□□□ -0.49
C9orf3-206ENST00000428313 ARHGAP32A7KAX9 2087 aa11.98□□□□□ -0.49
C9orf3-206ENST00000428313 TIMM17BO60830 172 aa11.98□□□□□ -0.49
C9orf3-206ENST00000428313 RNASE4P34096 147 aaKnown RBP11.98□□□□□ -0.49
C9orf3-206ENST00000428313 APRG1Q8IVJ8 170 aa11.98□□□□□ -0.49
C9orf3-206ENST00000428313 OPRPNQ99935 248 aaPredicted RBP11.98□□□□□ -0.49
C9orf3-206ENST00000428313 DSPP15924 2871 aaKnown RBP11.97□□□□□ -0.49
C9orf3-206ENST00000428313 Q6ZSV7 163 aa11.97□□□□□ -0.49
C9orf3-206ENST00000428313 ZNF580Q9UK33 172 aa11.97□□□□□ -0.49
C9orf3-206ENST00000428313 RPL18AQ02543 176 aaKnown RBP11.97□□□□□ -0.49
C9orf3-206ENST00000428313 FAM27E3Q08E93 113 aa11.97□□□□□ -0.49
C9orf3-206ENST00000428313 KIR2DL5BQ8NHK3 375 aa11.97□□□□□ -0.49
C9orf3-206ENST00000428313 DUX5Q96PT3 197 aa11.97□□□□□ -0.49
C9orf3-206ENST00000428313 IGHV1-58A0A0C4DH39 117 aa11.96□□□□□ -0.49
C9orf3-206ENST00000428313 COX7A2LO14548 114 aa11.96□□□□□ -0.49
C9orf3-206ENST00000428313 C15orf32Q32M92 178 aa11.96□□□□□ -0.49
C9orf3-206ENST00000428313 FAM19A4Q96LR4 140 aa11.96□□□□□ -0.49
C9orf3-206ENST00000428313 NDUFA12Q9UI09 145 aa11.96□□□□□ -0.49
C9orf3-206ENST00000428313 ADARB2-AS1A8MUL3 147 aa11.95□□□□□ -0.5
C9orf3-206ENST00000428313 GNRH2O43555 120 aa11.95□□□□□ -0.5
C9orf3-206ENST00000428313 INAFM2P0DMQ5 153 aa11.95□□□□□ -0.5
C9orf3-206ENST00000428313 FAM222AQ5U5X8 452 aa11.95□□□□□ -0.5
C9orf3-206ENST00000428313 VMO1Q7Z5L0 202 aa11.95□□□□□ -0.5
C9orf3-206ENST00000428313 C20orf203Q8NBC4 194 aa11.95□□□□□ -0.5
C9orf3-206ENST00000428313 RNASE6Q93091 150 aaKnown RBP11.95□□□□□ -0.5
C9orf3-206ENST00000428313 FAM215AQ9Y5M1 114 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms