RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 SRSF3P84103 164 aaKnown RBP17.36■□□□□ 0.37
HERPUD2-205ENST00000427455 IGLV2-18A0A075B6J9 118 aa17.35■□□□□ 0.37
HERPUD2-205ENST00000427455 MUC21A0A0G2JKD1 596 aa17.35■□□□□ 0.37
HERPUD2-205ENST00000427455 MUC21A0A140T8X8 626 aa17.35■□□□□ 0.37
HERPUD2-205ENST00000427455 C9JQL5 133 aa17.35■□□□□ 0.37
HERPUD2-205ENST00000427455 CRYGDP07320 174 aa17.35■□□□□ 0.37
HERPUD2-205ENST00000427455 FAM74A3Q4VXF1 159 aa17.35■□□□□ 0.37
HERPUD2-205ENST00000427455 FAM231DQ6ZW35 169 aa17.35■□□□□ 0.37
HERPUD2-205ENST00000427455 SH2D6Q7Z4S9 175 aa17.35■□□□□ 0.37
HERPUD2-205ENST00000427455 LINC01551Q86U37 167 aa17.35■□□□□ 0.37
HERPUD2-205ENST00000427455 A0A1W2PPQ1 181 aa17.34■□□□□ 0.37
HERPUD2-205ENST00000427455 Q6ZSN1 163 aa17.34■□□□□ 0.37
HERPUD2-205ENST00000427455 DNAH10Q8IVF4 4471 aa17.34■□□□□ 0.37
HERPUD2-205ENST00000427455 F2Z2F3 143 aa17.33■□□□□ 0.36
HERPUD2-205ENST00000427455 ERVFC1-1P60608 527 aa17.32■□□□□ 0.36
HERPUD2-205ENST00000427455 CACNG7P62955 275 aa17.32■□□□□ 0.36
HERPUD2-205ENST00000427455 LYPD5Q6UWN5 251 aa17.32■□□□□ 0.36
HERPUD2-205ENST00000427455 AP1S3Q96PC3 154 aa17.32■□□□□ 0.36
HERPUD2-205ENST00000427455 DNAH2Q9P225 4427 aa17.31■□□□□ 0.36
HERPUD2-205ENST00000427455 M0R2N4 97 aa17.31■□□□□ 0.36
HERPUD2-205ENST00000427455 GATCO43716 136 aaKnown RBP17.31■□□□□ 0.36
HERPUD2-205ENST00000427455 CTRLP40313 264 aa17.31■□□□□ 0.36
HERPUD2-205ENST00000427455 SSTP61278 116 aa17.31■□□□□ 0.36
HERPUD2-205ENST00000427455 TMEM241Q24JQ0 296 aa17.3■□□□□ 0.36
HERPUD2-205ENST00000427455 CLLU1Q5K131 121 aa17.3■□□□□ 0.36
HERPUD2-205ENST00000427455 Q6ZR54 194 aa17.3■□□□□ 0.36
HERPUD2-205ENST00000427455 C14orf178Q8N769 122 aaPredicted RBP17.3■□□□□ 0.36
HERPUD2-205ENST00000427455 Q9H8V8 135 aa17.3■□□□□ 0.36
HERPUD2-205ENST00000427455 IFITM2Q01629 132 aa17.29■□□□□ 0.36
HERPUD2-205ENST00000427455 CT83Q5H943 113 aa17.29■□□□□ 0.36
HERPUD2-205ENST00000427455 LYZL1Q6UWQ5 148 aa17.29■□□□□ 0.36
HERPUD2-205ENST00000427455 NAT8Q9UHE5 227 aa17.28■□□□□ 0.36
HERPUD2-205ENST00000427455 NBDYA0A0U1RRE5 68 aa17.27■□□□□ 0.36
HERPUD2-205ENST00000427455 A8MWL6 223 aa17.27■□□□□ 0.36
HERPUD2-205ENST00000427455 SMIM17P0DL12 118 aa17.27■□□□□ 0.36
HERPUD2-205ENST00000427455 TIRAPP58753 221 aa17.27■□□□□ 0.36
HERPUD2-205ENST00000427455 ZNF56Q15929 161 aa17.27■□□□□ 0.36
HERPUD2-205ENST00000427455 SOHLH1Q5JUK2 328 aa17.27■□□□□ 0.36
HERPUD2-205ENST00000427455 CNFNQ9BYD5 112 aa17.27■□□□□ 0.36
HERPUD2-205ENST00000427455 OSTCQ9NRP0 149 aa17.27■□□□□ 0.36
HERPUD2-205ENST00000427455 LINC00694P0DN24 101 aa17.26■□□□□ 0.35
HERPUD2-205ENST00000427455 RAB4BP61018 213 aa17.26■□□□□ 0.35
HERPUD2-205ENST00000427455 RPL23P62829 140 aaKnown RBP17.26■□□□□ 0.35
HERPUD2-205ENST00000427455 WDR73Q6P4I2 378 aa17.26■□□□□ 0.35
HERPUD2-205ENST00000427455 GTSF1Q8WW33 167 aa17.26■□□□□ 0.35
HERPUD2-205ENST00000427455 GAGE12JA6NER3 117 aa17.25■□□□□ 0.35
HERPUD2-205ENST00000427455 GAGE1Q13065 139 aa17.25■□□□□ 0.35
HERPUD2-205ENST00000427455 GAGE4Q13068 117 aa17.25■□□□□ 0.35
HERPUD2-205ENST00000427455 GAGE5Q13069 117 aa17.25■□□□□ 0.35
HERPUD2-205ENST00000427455 GAGE13Q4V321 117 aa17.25■□□□□ 0.35
HERPUD2-205ENST00000427455 ISOC2Q96AB3 205 aa17.25■□□□□ 0.35
HERPUD2-205ENST00000427455 KIF25-AS1Q9Y6Z4 181 aa17.25■□□□□ 0.35
HERPUD2-205ENST00000427455 FRAS1Q86XX4 4008 aa17.24■□□□□ 0.35
HERPUD2-205ENST00000427455 TRBV10-1A0A0K0K1A3 114 aa17.24■□□□□ 0.35
HERPUD2-205ENST00000427455 SIVA1O15304 175 aa17.24■□□□□ 0.35
HERPUD2-205ENST00000427455 TRGC1P0CF51 173 aa17.24■□□□□ 0.35
HERPUD2-205ENST00000427455 ADIRFQ15847 76 aa17.24■□□□□ 0.35
HERPUD2-205ENST00000427455 TTC32Q5I0X7 151 aa17.24■□□□□ 0.35
HERPUD2-205ENST00000427455 C15orf54Q8N8G6 183 aa17.24■□□□□ 0.35
HERPUD2-205ENST00000427455 ATP6V0E2Q8NHE4 81 aa17.24■□□□□ 0.35
HERPUD2-205ENST00000427455 MSRB1Q9NZV6 116 aa17.24■□□□□ 0.35
HERPUD2-205ENST00000427455 Q9UF83 564 aa17.23■□□□□ 0.35
HERPUD2-205ENST00000427455 NTF3P20783 257 aa17.22■□□□□ 0.35
HERPUD2-205ENST00000427455 GTSF1LQ9H1H1 148 aa17.22■□□□□ 0.35
HERPUD2-205ENST00000427455 F5H697 171 aa17.21■□□□□ 0.35
HERPUD2-205ENST00000427455 LINC00315P59091 139 aa17.21■□□□□ 0.35
HERPUD2-205ENST00000427455 TSKUQ8WUA8 353 aa17.21■□□□□ 0.35
HERPUD2-205ENST00000427455 GFRA4Q9GZZ7 299 aa17.21■□□□□ 0.35
HERPUD2-205ENST00000427455 FOXA3P55318 350 aaPredicted RBP17.2■□□□□ 0.34
HERPUD2-205ENST00000427455 TWIST1Q15672 202 aa17.2■□□□□ 0.34
HERPUD2-205ENST00000427455 V9GYV3 84 aa17.2■□□□□ 0.34
HERPUD2-205ENST00000427455 FAM231BA6NCW3 169 aa17.19■□□□□ 0.34
HERPUD2-205ENST00000427455 MGPP08493 103 aa17.19■□□□□ 0.34
HERPUD2-205ENST00000427455 EVI2AP22794 236 aa17.19■□□□□ 0.34
HERPUD2-205ENST00000427455 RPL36AP83881 106 aaKnown RBP17.19■□□□□ 0.34
HERPUD2-205ENST00000427455 WFDC10BQ8IUB3 73 aa17.19■□□□□ 0.34
HERPUD2-205ENST00000427455 RPL36ALQ969Q0 106 aaKnown RBP17.19■□□□□ 0.34
HERPUD2-205ENST00000427455 OR10G8Q8NGN5 311 aa17.18■□□□□ 0.34
HERPUD2-205ENST00000427455 PGLYRP4Q96LB8 373 aa17.18■□□□□ 0.34
HERPUD2-205ENST00000427455 KRTAP1-5Q9BYS1 174 aa17.18■□□□□ 0.34
HERPUD2-205ENST00000427455 DPH3P1Q9H4G8 78 aa17.18■□□□□ 0.34
HERPUD2-205ENST00000427455 DNAH17Q9UFH2 4485 aa17.17■□□□□ 0.34
HERPUD2-205ENST00000427455 TRBV7-3A0A075B6L6 115 aa17.17■□□□□ 0.34
HERPUD2-205ENST00000427455 HIGD1CA8MV81 97 aa17.17■□□□□ 0.34
HERPUD2-205ENST00000427455 LELP1Q5T871 98 aa17.17■□□□□ 0.34
HERPUD2-205ENST00000427455 C1orf134Q5TEV5 83 aa17.17■□□□□ 0.34
HERPUD2-205ENST00000427455 EPPK1P58107 5090 aaKnown RBP17.17■□□□□ 0.34
HERPUD2-205ENST00000427455 FAT2Q9NYQ8 4349 aa17.16■□□□□ 0.34
HERPUD2-205ENST00000427455 TRAV8-6A0A0B4J262 113 aa17.16■□□□□ 0.34
HERPUD2-205ENST00000427455 NEXN-AS1Q8NBZ9 246 aa17.16■□□□□ 0.34
HERPUD2-205ENST00000427455 BORCS7Q96B45 105 aa17.16■□□□□ 0.34
HERPUD2-205ENST00000427455 RTL8CO15255 209 aa17.15■□□□□ 0.34
HERPUD2-205ENST00000427455 DNAH10OSP0CZ25 163 aa17.15■□□□□ 0.34
HERPUD2-205ENST00000427455 UBE2D3P61077 147 aa17.15■□□□□ 0.34
HERPUD2-205ENST00000427455 UBE2D2P62837 147 aa17.15■□□□□ 0.34
HERPUD2-205ENST00000427455 OR10J3Q5JRS4 329 aa17.15■□□□□ 0.34
HERPUD2-205ENST00000427455 LINC00336Q6ZUF6 198 aa17.15■□□□□ 0.34
HERPUD2-205ENST00000427455 H7C1H1 209 aa17.14■□□□□ 0.33
HERPUD2-205ENST00000427455 SUMO4Q6EEV6 95 aa17.14■□□□□ 0.33
HERPUD2-205ENST00000427455 SMIM15Q7Z3B0 74 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms