RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 RIF1Q5UIP0 2472 aaKnown RBP1.07□□□□□ -2.24
PTPRC-208ENST00000427110 AKAP13Q12802 2813 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 PKDREJQ9NTG1 2253 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 APC2O95996 2303 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 ANKRD11Q6UB99 2663 aaPredicted RBP1.06□□□□□ -2.24
PTPRC-208ENST00000427110 MGAQ8IWI9 3026 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 PIEZO2Q9H5I5 2752 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 RP1L1Q8IWN7 2480 aaPredicted RBP1.06□□□□□ -2.24
PTPRC-208ENST00000427110 CFAP47Q6ZTR5 3102 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 TRBV20OR9-2A0A075B6H5 130 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 TRAV3A0A0B4J244 114 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 TRAV38-1A0A0B4J264 116 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 TRBV6-1A0A0K0K1D8 114 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 TEX50A0A1B0GTY4 177 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 A0A1B0GV50 99 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 MDFIC2A0A1B0GVS7 189 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 DPRXA6NFQ7 191 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 A8MWP6 167 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 DEFB108AA8MXU0 73 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 LINC00587B1AMM8 73 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 PPP5D1E7EU14 171 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 MKRN2OSH3BPM6 223 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 H7BYZ3 331 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 LTAP01374 205 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 APOA2P02652 100 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 GYPAP02724 150 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 MT-ND6P03923 174 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 TFF1P04155 84 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 REG1AP05451 166 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 FABP1P07148 127 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 OR5G3P0C626 314 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 SAA1P0DJI8 122 aaPredicted RBP1.06□□□□□ -2.24
PTPRC-208ENST00000427110 SAA2P0DJI9 122 aaPredicted RBP1.06□□□□□ -2.24
PTPRC-208ENST00000427110 ARL14EPLP0DKL9 152 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 C8orf88P0DMB2 117 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 GCHFRP30047 84 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 ATP5G3P48201 142 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 DLX6P56179 175 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 NDUFA6P56556 154 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 EDDM3BP56851 147 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 TAS2R45P59539 299 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 PKIAP61925 76 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 ERHP84090 104 aaKnown RBP1.06□□□□□ -2.24
PTPRC-208ENST00000427110 RPL19P84098 196 aaKnown RBP1.06□□□□□ -2.24
PTPRC-208ENST00000427110 TNFAIP6P98066 277 aaPredicted RBP1.06□□□□□ -2.24
PTPRC-208ENST00000427110 Q0VG73 95 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 EDDM3AQ14507 147 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 ADIRFQ15847 76 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 KLK9Q2XQG4 91 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 HLA-DRB5Q30154 266 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 TMEM155Q4W5P6 130 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 AKIRIN2Q53H80 203 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 RPL39P5Q59GN2 51 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 NCMAPQ5T1S8 102 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 MIC13Q5XKP0 118 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 RASL11AQ6T310 242 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 MUC15Q8N387 334 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 OR2T10Q8NGZ9 312 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 VSTM2AQ8TAG5 236 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 RNASE6Q93091 150 aaKnown RBP1.06□□□□□ -2.24
PTPRC-208ENST00000427110 SMIM12Q96EX1 92 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 SFRP2Q96HF1 295 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 FAM167A-AS1Q96KT0 104 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 ZNF714Q96N38 554 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 PFDN5Q99471 154 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 HIST1H2BLQ99880 126 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 NABP2Q9BQ15 211 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 GNB1LQ9BYB4 327 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 ENY2Q9NPA8 101 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 NIT2Q9NQR4 276 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 OSTCQ9NRP0 149 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 NDUFA4L2Q9NRX3 87 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 IL36BQ9NZH7 164 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 KLK9Q9UKQ9 250 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 FUT9Q9Y231 359 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 ABCA1O95477 2261 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 ABCA4P78363 2273 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 NBEAQ8NFP9 2946 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 WNK2Q9Y3S1 2297 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 GVINP1Q7Z2Y8 2422 aa1.06□□□□□ -2.24
PTPRC-208ENST00000427110 ATMQ13315 3056 aa1.05□□□□□ -2.24
PTPRC-208ENST00000427110 BOD1L1Q8NFC6 3051 aa1.05□□□□□ -2.24
PTPRC-208ENST00000427110 ASPMQ8IZT6 3477 aa1.05□□□□□ -2.24
PTPRC-208ENST00000427110 HIVEP3Q5T1R4 2406 aa1.05□□□□□ -2.24
PTPRC-208ENST00000427110 MUC6Q6W4X9 2439 aa1.05□□□□□ -2.24
PTPRC-208ENST00000427110 MAP1BP46821 2468 aaKnown RBP1.05□□□□□ -2.24
PTPRC-208ENST00000427110 ANKHD1Q8IWZ3 2542 aaKnown RBP1.05□□□□□ -2.24
PTPRC-208ENST00000427110 TLN1Q9Y490 2541 aaKnown RBP1.05□□□□□ -2.24
PTPRC-208ENST00000427110 TRGV4A0A0C4DH28 118 aa1.05□□□□□ -2.24
PTPRC-208ENST00000427110 IGHV1-69-2A0A0G2JMI3 117 aa1.05□□□□□ -2.24
PTPRC-208ENST00000427110 SMIM27A0A1W2PRY6 76 aa1.05□□□□□ -2.24
PTPRC-208ENST00000427110 TCRBV4S1A1TA0A5B7 111 aa1.05□□□□□ -2.24
PTPRC-208ENST00000427110 IGLC7A0M8Q6 106 aa1.05□□□□□ -2.24
PTPRC-208ENST00000427110 E7EUB6 86 aa1.05□□□□□ -2.24
PTPRC-208ENST00000427110 TSTD3H0UI37 97 aa1.05□□□□□ -2.24
PTPRC-208ENST00000427110 LY6LH3BQJ8 138 aa1.05□□□□□ -2.24
PTPRC-208ENST00000427110 CORTO00230 105 aa1.05□□□□□ -2.24
PTPRC-208ENST00000427110 HMGB3O15347 200 aaKnown RBP1.05□□□□□ -2.24
PTPRC-208ENST00000427110 NDUFB3O43676 98 aa1.05□□□□□ -2.24
PTPRC-208ENST00000427110 KALRNO60229 2985 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms