RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 TTC32Q5I0X7 151 aa12.36□□□□□ -0.43
HERC3-205ENST00000426683 SOHLH1Q5JUK2 328 aa12.36□□□□□ -0.43
HERC3-205ENST00000426683 SPANXN1Q5VSR9 72 aa12.36□□□□□ -0.43
HERC3-205ENST00000426683 OCC1Q8TAD7 63 aa12.36□□□□□ -0.43
HERC3-205ENST00000426683 FRAS1Q86XX4 4008 aa12.36□□□□□ -0.43
HERC3-205ENST00000426683 SSTP61278 116 aa12.35□□□□□ -0.43
HERC3-205ENST00000426683 C14orf178Q8N769 122 aaPredicted RBP12.35□□□□□ -0.43
HERC3-205ENST00000426683 K7EN84 100 aa12.34□□□□□ -0.43
HERC3-205ENST00000426683 FER1L6-AS1Q8NA97 138 aa12.34□□□□□ -0.43
HERC3-205ENST00000426683 NUDT10Q8NFP7 164 aa12.34□□□□□ -0.43
HERC3-205ENST00000426683 NUDT11Q96G61 164 aa12.34□□□□□ -0.43
HERC3-205ENST00000426683 TPPP3Q9BW30 176 aa12.34□□□□□ -0.43
HERC3-205ENST00000426683 KRTAP1-5Q9BYS1 174 aa12.34□□□□□ -0.43
HERC3-205ENST00000426683 A0A1W2PPQ1 181 aa12.33□□□□□ -0.44
HERC3-205ENST00000426683 XKRY2A2RUG3 117 aa12.33□□□□□ -0.44
HERC3-205ENST00000426683 GAGE12JA6NER3 117 aa12.33□□□□□ -0.44
HERC3-205ENST00000426683 PRSS29PA6NIE9 313 aa12.33□□□□□ -0.44
HERC3-205ENST00000426683 NDUFS6O75380 124 aaKnown RBP12.33□□□□□ -0.44
HERC3-205ENST00000426683 IGLC6P0CF74 106 aa12.33□□□□□ -0.44
HERC3-205ENST00000426683 GAGE1Q13065 139 aa12.33□□□□□ -0.44
HERC3-205ENST00000426683 GAGE4Q13068 117 aa12.33□□□□□ -0.44
HERC3-205ENST00000426683 GAGE5Q13069 117 aa12.33□□□□□ -0.44
HERC3-205ENST00000426683 GAGE13Q4V321 117 aa12.33□□□□□ -0.44
HERC3-205ENST00000426683 C6orf223Q8N319 242 aa12.33□□□□□ -0.44
HERC3-205ENST00000426683 DNAH17Q9UFH2 4485 aa12.33□□□□□ -0.44
HERC3-205ENST00000426683 SRP19P09132 144 aaKnown RBP12.32□□□□□ -0.44
HERC3-205ENST00000426683 TIRAPP58753 221 aa12.32□□□□□ -0.44
HERC3-205ENST00000426683 WFDC10BQ8IUB3 73 aa12.32□□□□□ -0.44
HERC3-205ENST00000426683 ATP6V0E2Q8NHE4 81 aa12.32□□□□□ -0.44
HERC3-205ENST00000426683 RNASE7Q9H1E1 156 aaKnown RBP12.32□□□□□ -0.44
HERC3-205ENST00000426683 Q9UF83 564 aa12.32□□□□□ -0.44
HERC3-205ENST00000426683 FAT2Q9NYQ8 4349 aa12.32□□□□□ -0.44
HERC3-205ENST00000426683 SMIM7Q9BQ49 75 aa12.31□□□□□ -0.44
HERC3-205ENST00000426683 RPP21Q9H633 154 aaKnown RBP12.31□□□□□ -0.44
HERC3-205ENST00000426683 LINC00694P0DN24 101 aa12.3□□□□□ -0.44
HERC3-205ENST00000426683 GTSF1LQ9H1H1 148 aa12.3□□□□□ -0.44
HERC3-205ENST00000426683 ZNF727A8MUV8 499 aa12.29□□□□□ -0.44
HERC3-205ENST00000426683 CACNG7P62955 275 aa12.29□□□□□ -0.44
HERC3-205ENST00000426683 ZNF56Q15929 161 aa12.29□□□□□ -0.44
HERC3-205ENST00000426683 AP1S3Q96PC3 154 aa12.29□□□□□ -0.44
HERC3-205ENST00000426683 LY96Q9Y6Y9 160 aa12.29□□□□□ -0.44
HERC3-205ENST00000426683 F2Z2F3 143 aa12.28□□□□□ -0.44
HERC3-205ENST00000426683 SMIM17P0DL12 118 aa12.28□□□□□ -0.44
HERC3-205ENST00000426683 RAB4BP61018 213 aa12.28□□□□□ -0.44
HERC3-205ENST00000426683 OR10J3Q5JRS4 329 aa12.28□□□□□ -0.44
HERC3-205ENST00000426683 LYZL1Q6UWQ5 148 aa12.28□□□□□ -0.44
HERC3-205ENST00000426683 TRAV8-6A0A0B4J262 113 aa12.27□□□□□ -0.45
HERC3-205ENST00000426683 TRBV10-1A0A0K0K1A3 114 aa12.27□□□□□ -0.45
HERC3-205ENST00000426683 GATCO43716 136 aaKnown RBP12.27□□□□□ -0.45
HERC3-205ENST00000426683 DNAH10OSP0CZ25 163 aa12.27□□□□□ -0.45
HERC3-205ENST00000426683 LELP1Q5T871 98 aa12.27□□□□□ -0.45
HERC3-205ENST00000426683 FAM231DQ6ZW35 169 aa12.27□□□□□ -0.45
HERC3-205ENST00000426683 MSRB1Q9NZV6 116 aa12.27□□□□□ -0.45
HERC3-205ENST00000426683 TRAV9-2A0A087WT02 112 aa12.26□□□□□ -0.45
HERC3-205ENST00000426683 A0A1B0GVY2 172 aa12.26□□□□□ -0.45
HERC3-205ENST00000426683 F5H697 171 aa12.26□□□□□ -0.45
HERC3-205ENST00000426683 BTF3P20290 206 aaKnown RBP12.26□□□□□ -0.45
HERC3-205ENST00000426683 EVI2AP22794 236 aa12.26□□□□□ -0.45
HERC3-205ENST00000426683 ERVFC1-1P60608 527 aa12.26□□□□□ -0.45
HERC3-205ENST00000426683 PEA15Q15121 130 aa12.26□□□□□ -0.45
HERC3-205ENST00000426683 LINC01551Q86U37 167 aa12.26□□□□□ -0.45
HERC3-205ENST00000426683 KIF25-AS1Q9Y6Z4 181 aa12.26□□□□□ -0.45
HERC3-205ENST00000426683 IGHV3-38A0A0C4DH36 116 aa12.25□□□□□ -0.45
HERC3-205ENST00000426683 C9JQL5 133 aa12.25□□□□□ -0.45
HERC3-205ENST00000426683 CTRLP40313 264 aa12.25□□□□□ -0.45
HERC3-205ENST00000426683 LINC00315P59091 139 aa12.25□□□□□ -0.45
HERC3-205ENST00000426683 RPL36AP83881 106 aaKnown RBP12.25□□□□□ -0.45
HERC3-205ENST00000426683 SRSF3P84103 164 aaKnown RBP12.25□□□□□ -0.45
HERC3-205ENST00000426683 TNP2Q05952 138 aa12.25□□□□□ -0.45
HERC3-205ENST00000426683 RPL36ALQ969Q0 106 aaKnown RBP12.25□□□□□ -0.45
HERC3-205ENST00000426683 NTF3P20783 257 aa12.24□□□□□ -0.45
HERC3-205ENST00000426683 HECTD4Q9Y4D8 3996 aa12.24□□□□□ -0.45
HERC3-205ENST00000426683 TRBV7-3A0A075B6L6 115 aa12.23□□□□□ -0.45
HERC3-205ENST00000426683 MGPP08493 103 aa12.23□□□□□ -0.45
HERC3-205ENST00000426683 TRGC1P0CF51 173 aa12.23□□□□□ -0.45
HERC3-205ENST00000426683 FAM74A3Q4VXF1 159 aa12.23□□□□□ -0.45
HERC3-205ENST00000426683 WDR73Q6P4I2 378 aa12.23□□□□□ -0.45
HERC3-205ENST00000426683 NEXN-AS1Q8NBZ9 246 aa12.23□□□□□ -0.45
HERC3-205ENST00000426683 OR10G8Q8NGN5 311 aa12.23□□□□□ -0.45
HERC3-205ENST00000426683 GTSF1Q8WW33 167 aa12.23□□□□□ -0.45
HERC3-205ENST00000426683 A8MWL6 223 aa12.22□□□□□ -0.45
HERC3-205ENST00000426683 K7EP13 123 aa12.22□□□□□ -0.45
HERC3-205ENST00000426683 UBE2D3P61077 147 aa12.22□□□□□ -0.45
HERC3-205ENST00000426683 UBE2D2P62837 147 aa12.22□□□□□ -0.45
HERC3-205ENST00000426683 TWIST1Q15672 202 aa12.22□□□□□ -0.45
HERC3-205ENST00000426683 TMEM241Q24JQ0 296 aa12.22□□□□□ -0.45
HERC3-205ENST00000426683 LINC01556Q5JQF7 62 aa12.22□□□□□ -0.45
HERC3-205ENST00000426683 CNFNQ9BYD5 112 aa12.22□□□□□ -0.45
HERC3-205ENST00000426683 SMDT1Q9H4I9 107 aa12.22□□□□□ -0.45
HERC3-205ENST00000426683 TNFRSF18Q9Y5U5 241 aa12.22□□□□□ -0.45
HERC3-205ENST00000426683 A0A087WWC5 75 aa12.21□□□□□ -0.45
HERC3-205ENST00000426683 RAB14P61106 215 aa12.21□□□□□ -0.45
HERC3-205ENST00000426683 CT83Q5H943 113 aa12.21□□□□□ -0.45
HERC3-205ENST00000426683 C10orf126Q8N4M7 172 aa12.21□□□□□ -0.45
HERC3-205ENST00000426683 OSTCQ9NRP0 149 aa12.21□□□□□ -0.45
HERC3-205ENST00000426683 IGHV3-30P01768 117 aa12.2□□□□□ -0.46
HERC3-205ENST00000426683 IGHV3-33P01772 117 aa12.2□□□□□ -0.46
HERC3-205ENST00000426683 IGHV3-30-3P0DP02 117 aa12.2□□□□□ -0.46
HERC3-205ENST00000426683 IGHV3-30-5P0DP03 117 aa12.2□□□□□ -0.46
HERC3-205ENST00000426683 SUMO4Q6EEV6 95 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms