RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 OR2D3Q8NGH3 330 aa12.78□□□□□ -0.36
PRNP-202ENST00000424424 ATP6V0E2Q8NHE4 81 aa12.78□□□□□ -0.36
PRNP-202ENST00000424424 KRTAP1-5Q9BYS1 174 aa12.78□□□□□ -0.36
PRNP-202ENST00000424424 TRBV20OR9-2A0A075B6H5 130 aa12.77□□□□□ -0.37
PRNP-202ENST00000424424 C19orf71A6NCJ1 209 aa12.77□□□□□ -0.37
PRNP-202ENST00000424424 K7EP13 123 aa12.77□□□□□ -0.37
PRNP-202ENST00000424424 CRYGDP07320 174 aa12.77□□□□□ -0.37
PRNP-202ENST00000424424 EVI2AP22794 236 aa12.77□□□□□ -0.37
PRNP-202ENST00000424424 OR10AG1Q8NH19 301 aa12.77□□□□□ -0.37
PRNP-202ENST00000424424 EIF5A2Q9GZV4 153 aaKnown RBP12.77□□□□□ -0.37
PRNP-202ENST00000424424 TRAV8-6A0A0B4J262 113 aa12.76□□□□□ -0.37
PRNP-202ENST00000424424 GAGE12JA6NER3 117 aa12.76□□□□□ -0.37
PRNP-202ENST00000424424 GAGE1Q13065 139 aa12.76□□□□□ -0.37
PRNP-202ENST00000424424 GAGE4Q13068 117 aa12.76□□□□□ -0.37
PRNP-202ENST00000424424 GAGE5Q13069 117 aa12.76□□□□□ -0.37
PRNP-202ENST00000424424 GAGE13Q4V321 117 aa12.76□□□□□ -0.37
PRNP-202ENST00000424424 WFDC10BQ8IUB3 73 aa12.76□□□□□ -0.37
PRNP-202ENST00000424424 GTSF1LQ9H1H1 148 aa12.76□□□□□ -0.37
PRNP-202ENST00000424424 A0A1B0GVY2 172 aa12.75□□□□□ -0.37
PRNP-202ENST00000424424 OR10J3Q5JRS4 329 aa12.75□□□□□ -0.37
PRNP-202ENST00000424424 TOR2AQ5JU69 321 aa12.75□□□□□ -0.37
PRNP-202ENST00000424424 C14orf178Q8N769 122 aaPredicted RBP12.75□□□□□ -0.37
PRNP-202ENST00000424424 MUC21A0A0G2JKD1 596 aa12.74□□□□□ -0.37
PRNP-202ENST00000424424 MUC21A0A140T8X8 626 aa12.74□□□□□ -0.37
PRNP-202ENST00000424424 DNAH10OSP0CZ25 163 aa12.74□□□□□ -0.37
PRNP-202ENST00000424424 CEBPGP53567 150 aa12.74□□□□□ -0.37
PRNP-202ENST00000424424 SSTP61278 116 aa12.74□□□□□ -0.37
PRNP-202ENST00000424424 LELP1Q5T871 98 aa12.74□□□□□ -0.37
PRNP-202ENST00000424424 FER1L6-AS1Q8NA97 138 aa12.74□□□□□ -0.37
PRNP-202ENST00000424424 TPPP3Q9BW30 176 aa12.74□□□□□ -0.37
PRNP-202ENST00000424424 IGHV3-38A0A0C4DH36 116 aa12.73□□□□□ -0.37
PRNP-202ENST00000424424 NDUFS6O75380 124 aaKnown RBP12.73□□□□□ -0.37
PRNP-202ENST00000424424 SMIM17P0DL12 118 aa12.73□□□□□ -0.37
PRNP-202ENST00000424424 GZMBP10144 247 aa12.73□□□□□ -0.37
PRNP-202ENST00000424424 LINC00315P59091 139 aa12.73□□□□□ -0.37
PRNP-202ENST00000424424 RAB4BP61018 213 aa12.73□□□□□ -0.37
PRNP-202ENST00000424424 OCC1Q8TAD7 63 aa12.73□□□□□ -0.37
PRNP-202ENST00000424424 FAM210AQ96ND0 272 aa12.73□□□□□ -0.37
PRNP-202ENST00000424424 TRBV10-1A0A0K0K1A3 114 aa12.72□□□□□ -0.37
PRNP-202ENST00000424424 F2Z2F3 143 aa12.72□□□□□ -0.37
PRNP-202ENST00000424424 IGLC6P0CF74 106 aa12.72□□□□□ -0.37
PRNP-202ENST00000424424 CACNG7P62955 275 aa12.72□□□□□ -0.37
PRNP-202ENST00000424424 TNP2Q05952 138 aa12.72□□□□□ -0.37
PRNP-202ENST00000424424 ZNF56Q15929 161 aa12.72□□□□□ -0.37
PRNP-202ENST00000424424 C10orf126Q8N4M7 172 aa12.72□□□□□ -0.37
PRNP-202ENST00000424424 NUDT10Q8NFP7 164 aa12.72□□□□□ -0.37
PRNP-202ENST00000424424 NUDT11Q96G61 164 aa12.72□□□□□ -0.37
PRNP-202ENST00000424424 AP1S3Q96PC3 154 aa12.72□□□□□ -0.37
PRNP-202ENST00000424424 HECTD4Q9Y4D8 3996 aa12.71□□□□□ -0.37
PRNP-202ENST00000424424 LINC00694P0DN24 101 aa12.71□□□□□ -0.37
PRNP-202ENST00000424424 RPL36AP83881 106 aaKnown RBP12.71□□□□□ -0.37
PRNP-202ENST00000424424 TEX261Q6UWH6 196 aa12.71□□□□□ -0.37
PRNP-202ENST00000424424 NFE4Q86UQ8 179 aa12.71□□□□□ -0.37
PRNP-202ENST00000424424 RPL36ALQ969Q0 106 aaKnown RBP12.71□□□□□ -0.37
PRNP-202ENST00000424424 A0A087WWC5 75 aa12.7□□□□□ -0.38
PRNP-202ENST00000424424 F5H697 171 aa12.7□□□□□ -0.38
PRNP-202ENST00000424424 K7EN84 100 aa12.7□□□□□ -0.38
PRNP-202ENST00000424424 RPP21Q9H633 154 aaKnown RBP12.7□□□□□ -0.38
PRNP-202ENST00000424424 LINC01556Q5JQF7 62 aa12.69□□□□□ -0.38
PRNP-202ENST00000424424 SMIM7Q9BQ49 75 aa12.69□□□□□ -0.38
PRNP-202ENST00000424424 RNASE7Q9H1E1 156 aaKnown RBP12.69□□□□□ -0.38
PRNP-202ENST00000424424 Q9UF83 564 aa12.69□□□□□ -0.38
PRNP-202ENST00000424424 TRBV7-3A0A075B6L6 115 aa12.68□□□□□ -0.38
PRNP-202ENST00000424424 LYZL1Q6UWQ5 148 aa12.68□□□□□ -0.38
PRNP-202ENST00000424424 MSRB1Q9NZV6 116 aa12.68□□□□□ -0.38
PRNP-202ENST00000424424 PCLOQ9Y6V0 5065 aa12.68□□□□□ -0.38
PRNP-202ENST00000424424 DNAH2Q9P225 4427 aa12.68□□□□□ -0.38
PRNP-202ENST00000424424 ZNF727A8MUV8 499 aa12.67□□□□□ -0.38
PRNP-202ENST00000424424 SRP19P09132 144 aaKnown RBP12.67□□□□□ -0.38
PRNP-202ENST00000424424 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.67□□□□□ -0.38
PRNP-202ENST00000424424 DNAH17Q9UFH2 4485 aa12.66□□□□□ -0.38
PRNP-202ENST00000424424 GATCO43716 136 aaKnown RBP12.66□□□□□ -0.38
PRNP-202ENST00000424424 TRGC1P0CF51 173 aa12.66□□□□□ -0.38
PRNP-202ENST00000424424 WDR73Q6P4I2 378 aa12.66□□□□□ -0.38
PRNP-202ENST00000424424 FAM231DQ6ZW35 169 aa12.66□□□□□ -0.38
PRNP-202ENST00000424424 OR10G8Q8NGN5 311 aa12.66□□□□□ -0.38
PRNP-202ENST00000424424 KIF25-AS1Q9Y6Z4 181 aa12.66□□□□□ -0.38
PRNP-202ENST00000424424 NTF3P20783 257 aa12.65□□□□□ -0.38
PRNP-202ENST00000424424 ERVFC1-1P60608 527 aa12.65□□□□□ -0.38
PRNP-202ENST00000424424 TNFRSF18Q9Y5U5 241 aa12.65□□□□□ -0.38
PRNP-202ENST00000424424 IGHV3-30P01768 117 aa12.64□□□□□ -0.39
PRNP-202ENST00000424424 IGHV3-33P01772 117 aa12.64□□□□□ -0.39
PRNP-202ENST00000424424 MGPP08493 103 aa12.64□□□□□ -0.39
PRNP-202ENST00000424424 IGHV3-30-3P0DP02 117 aa12.64□□□□□ -0.39
PRNP-202ENST00000424424 IGHV3-30-5P0DP03 117 aa12.64□□□□□ -0.39
PRNP-202ENST00000424424 CTRLP40313 264 aa12.64□□□□□ -0.39
PRNP-202ENST00000424424 UBE2D3P61077 147 aa12.64□□□□□ -0.39
PRNP-202ENST00000424424 UBE2D2P62837 147 aa12.64□□□□□ -0.39
PRNP-202ENST00000424424 Q6ZRN7 208 aaPredicted RBP12.64□□□□□ -0.39
PRNP-202ENST00000424424 NEXN-AS1Q8NBZ9 246 aa12.64□□□□□ -0.39
PRNP-202ENST00000424424 A8MWL6 223 aa12.63□□□□□ -0.39
PRNP-202ENST00000424424 H7C1H1 209 aa12.63□□□□□ -0.39
PRNP-202ENST00000424424 PEA15Q15121 130 aa12.63□□□□□ -0.39
PRNP-202ENST00000424424 TWIST1Q15672 202 aa12.63□□□□□ -0.39
PRNP-202ENST00000424424 FAM74A3Q4VXF1 159 aa12.63□□□□□ -0.39
PRNP-202ENST00000424424 URGCP-MRPS24S4R325 110 aa12.63□□□□□ -0.39
PRNP-202ENST00000424424 FAT2Q9NYQ8 4349 aa12.62□□□□□ -0.39
PRNP-202ENST00000424424 KIAA1109Q2LD37 5005 aa12.62□□□□□ -0.39
PRNP-202ENST00000424424 IBA57-AS1B1ANH7 110 aa12.62□□□□□ -0.39
PRNP-202ENST00000424424 EREGO14944 169 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms