RNA–Protein interactions for RNA: ENST00000424254.6

FBXO28-202, Transcript of F-box protein 28, humanhuman

TSL 1 (best) BASIC

Gene FBXO28, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-202ENST00000424254 ZFP82Q8N141 532 aa13.3□□□□□ -0.28
FBXO28-202ENST00000424254 GTSF1LQ9H1H1 148 aa13.3□□□□□ -0.28
FBXO28-202ENST00000424254 MSRB1Q9NZV6 116 aa13.3□□□□□ -0.28
FBXO28-202ENST00000424254 OR10J3Q5JRS4 329 aa13.29□□□□□ -0.28
FBXO28-202ENST00000424254 LELP1Q5T871 98 aa13.29□□□□□ -0.28
FBXO28-202ENST00000424254 LRP1BQ9NZR2 4599 aa13.28□□□□□ -0.28
FBXO28-202ENST00000424254 TRAV8-6A0A0B4J262 113 aa13.28□□□□□ -0.28
FBXO28-202ENST00000424254 CXCL1P09341 107 aa13.28□□□□□ -0.28
FBXO28-202ENST00000424254 CENPWQ5EE01 88 aa13.28□□□□□ -0.28
FBXO28-202ENST00000424254 LINC01556Q5JQF7 62 aa13.28□□□□□ -0.28
FBXO28-202ENST00000424254 NFE4Q86UQ8 179 aa13.28□□□□□ -0.28
FBXO28-202ENST00000424254 IGLV2-8P01709 118 aa13.27□□□□□ -0.29
FBXO28-202ENST00000424254 MEF2BQ02080 365 aaPredicted RBP13.27□□□□□ -0.29
FBXO28-202ENST00000424254 C10orf126Q8N4M7 172 aa13.27□□□□□ -0.29
FBXO28-202ENST00000424254 OR10AG1Q8NH19 301 aa13.27□□□□□ -0.29
FBXO28-202ENST00000424254 RYR1P21817 5038 aa13.26□□□□□ -0.29
FBXO28-202ENST00000424254 IFNA1P01562 189 aa13.26□□□□□ -0.29
FBXO28-202ENST00000424254 BCL2P10415 239 aa13.26□□□□□ -0.29
FBXO28-202ENST00000424254 MUC21A0A0G2JKD1 596 aa13.25□□□□□ -0.29
FBXO28-202ENST00000424254 MUC21A0A140T8X8 626 aa13.25□□□□□ -0.29
FBXO28-202ENST00000424254 RAB19A4D1S5 217 aa13.25□□□□□ -0.29
FBXO28-202ENST00000424254 SNAI2O43623 268 aa13.25□□□□□ -0.29
FBXO28-202ENST00000424254 PDE6DO43924 150 aa13.25□□□□□ -0.29
FBXO28-202ENST00000424254 SSBP4Q9BWG4 385 aaPredicted RBP13.25□□□□□ -0.29
FBXO28-202ENST00000424254 IGHV3-30P01768 117 aa13.24□□□□□ -0.29
FBXO28-202ENST00000424254 IGHV3-33P01772 117 aa13.24□□□□□ -0.29
FBXO28-202ENST00000424254 IGHV3-30-3P0DP02 117 aa13.24□□□□□ -0.29
FBXO28-202ENST00000424254 IGHV3-30-5P0DP03 117 aa13.24□□□□□ -0.29
FBXO28-202ENST00000424254 TRBV20OR9-2A0A075B6H5 130 aa13.23□□□□□ -0.29
FBXO28-202ENST00000424254 OR5AL1P0C617 328 aa13.23□□□□□ -0.29
FBXO28-202ENST00000424254 ERVFC1-1P60608 527 aa13.23□□□□□ -0.29
FBXO28-202ENST00000424254 ALKAL2Q6UX46 152 aa13.23□□□□□ -0.29
FBXO28-202ENST00000424254 MED9Q9NWA0 146 aa13.23□□□□□ -0.29
FBXO28-202ENST00000424254 VAX2Q9UIW0 290 aa13.23□□□□□ -0.29
FBXO28-202ENST00000424254 A0A1B0GVG6 124 aa13.22□□□□□ -0.29
FBXO28-202ENST00000424254 IBA57-AS1B1ANH7 110 aa13.22□□□□□ -0.29
FBXO28-202ENST00000424254 GNG4P50150 75 aa13.22□□□□□ -0.29
FBXO28-202ENST00000424254 Q8N3U1 123 aa13.22□□□□□ -0.29
FBXO28-202ENST00000424254 A0A087WTM6 91 aa13.21□□□□□ -0.29
FBXO28-202ENST00000424254 C19orf71A6NCJ1 209 aa13.21□□□□□ -0.29
FBXO28-202ENST00000424254 FUSP35637 526 aaKnown RBP eCLIP13.21□□□□□ -0.29
FBXO28-202ENST00000424254 SSTP61278 116 aa13.21□□□□□ -0.29
FBXO28-202ENST00000424254 SPANXN1Q5VSR9 72 aa13.21□□□□□ -0.29
FBXO28-202ENST00000424254 SMIM12Q96EX1 92 aa13.21□□□□□ -0.29
FBXO28-202ENST00000424254 BOLA1Q9Y3E2 137 aa13.21□□□□□ -0.29
FBXO28-202ENST00000424254 TRBV10-1A0A0K0K1A3 114 aa13.2□□□□□ -0.3
FBXO28-202ENST00000424254 GZMBP10144 247 aa13.2□□□□□ -0.3
FBXO28-202ENST00000424254 NKX2-5P52952 324 aaPredicted RBP13.2□□□□□ -0.3
FBXO28-202ENST00000424254 DNAH5Q8TE73 4624 aa13.19□□□□□ -0.3
FBXO28-202ENST00000424254 TAGLN2P37802 199 aaKnown RBP13.19□□□□□ -0.3
FBXO28-202ENST00000424254 ZNF56Q15929 161 aa13.19□□□□□ -0.3
FBXO28-202ENST00000424254 OR2D3Q8NGH3 330 aa13.19□□□□□ -0.3
FBXO28-202ENST00000424254 DAZAP1Q96EP5 407 aaKnown RBP13.19□□□□□ -0.3
FBXO28-202ENST00000424254 Q9HAA7 133 aa13.19□□□□□ -0.3
FBXO28-202ENST00000424254 HSPG2P98160 4391 aa13.19□□□□□ -0.3
FBXO28-202ENST00000424254 A0A087WWC5 75 aa13.18□□□□□ -0.3
FBXO28-202ENST00000424254 EREGO14944 169 aa13.18□□□□□ -0.3
FBXO28-202ENST00000424254 CDK2AP2O75956 126 aa13.18□□□□□ -0.3
FBXO28-202ENST00000424254 RAB4BP61018 213 aa13.18□□□□□ -0.3
FBXO28-202ENST00000424254 PCLOQ9Y6V0 5065 aa13.18□□□□□ -0.3
FBXO28-202ENST00000424254 RBFOX3A6NFN3 312 aa13.17□□□□□ -0.3
FBXO28-202ENST00000424254 IGLC6P0CF74 106 aa13.17□□□□□ -0.3
FBXO28-202ENST00000424254 UBE2D3P61077 147 aa13.17□□□□□ -0.3
FBXO28-202ENST00000424254 UBE2D2P62837 147 aa13.17□□□□□ -0.3
FBXO28-202ENST00000424254 RPL36AP83881 106 aaKnown RBP13.17□□□□□ -0.3
FBXO28-202ENST00000424254 RPL36ALQ969Q0 106 aaKnown RBP13.17□□□□□ -0.3
FBXO28-202ENST00000424254 TPPP3Q9BW30 176 aa13.17□□□□□ -0.3
FBXO28-202ENST00000424254 KRTAP17-1Q9BYP8 105 aa13.17□□□□□ -0.3
FBXO28-202ENST00000424254 TRBV7-3A0A075B6L6 115 aa13.16□□□□□ -0.3
FBXO28-202ENST00000424254 RPS20P60866 119 aaKnown RBP13.16□□□□□ -0.3
FBXO28-202ENST00000424254 BLOC1S1P78537 153 aa13.16□□□□□ -0.3
FBXO28-202ENST00000424254 FER1L6-AS1Q8NA97 138 aa13.16□□□□□ -0.3
FBXO28-202ENST00000424254 OR10G8Q8NGN5 311 aa13.16□□□□□ -0.3
FBXO28-202ENST00000424254 PGPEP1Q9NXJ5 209 aa13.16□□□□□ -0.3
FBXO28-202ENST00000424254 KIF25-AS1Q9Y6Z4 181 aa13.16□□□□□ -0.3
FBXO28-202ENST00000424254 P01737 135 aa13.15□□□□□ -0.3
FBXO28-202ENST00000424254 DAZ4Q86SG3 579 aaKnown RBP13.15□□□□□ -0.3
FBXO28-202ENST00000424254 NEXN-AS1Q8NBZ9 246 aa13.15□□□□□ -0.3
FBXO28-202ENST00000424254 LYPD6BQ8NI32 183 aa13.15□□□□□ -0.3
FBXO28-202ENST00000424254 DAZ3Q9NR90 486 aaKnown RBP13.15□□□□□ -0.3
FBXO28-202ENST00000424254 APOBP04114 4563 aaKnown RBP13.15□□□□□ -0.3
FBXO28-202ENST00000424254 PSCAO43653 123 aa13.14□□□□□ -0.31
FBXO28-202ENST00000424254 LAGE3Q14657 143 aa13.14□□□□□ -0.31
FBXO28-202ENST00000424254 AP1S3Q96PC3 154 aa13.14□□□□□ -0.31
FBXO28-202ENST00000424254 LRCOL1A6NCL2 159 aa13.13□□□□□ -0.31
FBXO28-202ENST00000424254 F5H697 171 aa13.13□□□□□ -0.31
FBXO28-202ENST00000424254 NIT1Q86X76 327 aa13.13□□□□□ -0.31
FBXO28-202ENST00000424254 BIN3Q9NQY0 253 aa13.13□□□□□ -0.31
FBXO28-202ENST00000424254 K7EN84 100 aa13.13□□□□□ -0.31
FBXO28-202ENST00000424254 SMIM17P0DL12 118 aa13.13□□□□□ -0.31
FBXO28-202ENST00000424254 CDPF1Q6NVV7 123 aa13.13□□□□□ -0.31
FBXO28-202ENST00000424254 NUDT10Q8NFP7 164 aa13.13□□□□□ -0.31
FBXO28-202ENST00000424254 NUDT11Q96G61 164 aa13.13□□□□□ -0.31
FBXO28-202ENST00000424254 XKRY2A2RUG3 117 aa13.12□□□□□ -0.31
FBXO28-202ENST00000424254 OCC1Q8TAD7 63 aa13.12□□□□□ -0.31
FBXO28-202ENST00000424254 KRTAP4-5Q9BYR2 181 aa13.12□□□□□ -0.31
FBXO28-202ENST00000424254 CACNG7P62955 275 aa13.11□□□□□ -0.31
FBXO28-202ENST00000424254 LYZL1Q6UWQ5 148 aa13.11□□□□□ -0.31
FBXO28-202ENST00000424254 RNASE7Q9H1E1 156 aaKnown RBP13.11□□□□□ -0.31
FBXO28-202ENST00000424254 F2Z2F3 143 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 163.7 ms