RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 SIRPDQ9H106 197 aa10.84□□□□□ -0.67
MSH5-206ENST00000423982 MUC4Q99102 2169 aa10.83□□□□□ -0.68
MSH5-206ENST00000423982 IGHV4-4A0A075B6R2 117 aa10.83□□□□□ -0.68
MSH5-206ENST00000423982 F6UB75 175 aa10.83□□□□□ -0.68
MSH5-206ENST00000423982 MSMBP08118 114 aa10.83□□□□□ -0.68
MSH5-206ENST00000423982 BEX4Q9NWD9 120 aaPredicted RBP10.83□□□□□ -0.68
MSH5-206ENST00000423982 GNRH2O43555 120 aa10.83□□□□□ -0.68
MSH5-206ENST00000423982 PSMB2P49721 201 aa10.83□□□□□ -0.68
MSH5-206ENST00000423982 SYT8Q8NBV8 401 aa10.83□□□□□ -0.68
MSH5-206ENST00000423982 AJUBAQ96IF1 538 aa10.83□□□□□ -0.68
MSH5-206ENST00000423982 DUSP14O95147 198 aaKnown RBP10.82□□□□□ -0.68
MSH5-206ENST00000423982 SCGB1A1P11684 91 aa10.82□□□□□ -0.68
MSH5-206ENST00000423982 S100A4P26447 101 aaKnown RBP10.82□□□□□ -0.68
MSH5-206ENST00000423982 RAB9AP51151 201 aa10.82□□□□□ -0.68
MSH5-206ENST00000423982 TMEM219Q86XT9 240 aa10.82□□□□□ -0.68
MSH5-206ENST00000423982 MRAP2Q96G30 205 aa10.82□□□□□ -0.68
MSH5-206ENST00000423982 DSCR9P59020 149 aa10.82□□□□□ -0.68
MSH5-206ENST00000423982 SRSF9Q13242 221 aaKnown RBP eCLIP10.82□□□□□ -0.68
MSH5-206ENST00000423982 BAHCC1Q9P281 2608 aa10.82□□□□□ -0.68
MSH5-206ENST00000423982 TSPAN13O95857 204 aa10.81□□□□□ -0.68
MSH5-206ENST00000423982 TRBV12-3P01733 135 aa10.81□□□□□ -0.68
MSH5-206ENST00000423982 FOXI1Q12951 378 aa10.81□□□□□ -0.68
MSH5-206ENST00000423982 ANXA2RQ3ZCQ2 193 aa10.81□□□□□ -0.68
MSH5-206ENST00000423982 ORMDL2Q53FV1 153 aa10.81□□□□□ -0.68
MSH5-206ENST00000423982 CFAP126Q5VTH2 177 aa10.81□□□□□ -0.68
MSH5-206ENST00000423982 KRTAP1-3Q8IUG1 177 aa10.81□□□□□ -0.68
MSH5-206ENST00000423982 AVPP01185 164 aa10.81□□□□□ -0.68
MSH5-206ENST00000423982 CRYGDP07320 174 aa10.81□□□□□ -0.68
MSH5-206ENST00000423982 IGHV4-38-2P0DP08 117 aa10.81□□□□□ -0.68
MSH5-206ENST00000423982 SAA4P35542 130 aa10.81□□□□□ -0.68
MSH5-206ENST00000423982 UNQ9165/PRO28630Q6UXU0 137 aa10.81□□□□□ -0.68
MSH5-206ENST00000423982 ZFAND2AQ8N6M9 145 aa10.81□□□□□ -0.68
MSH5-206ENST00000423982 PHLDA3Q9Y5J5 127 aa10.81□□□□□ -0.68
MSH5-206ENST00000423982 A0A096LNT2 108 aa10.8□□□□□ -0.68
MSH5-206ENST00000423982 B4DSR2 109 aa10.8□□□□□ -0.68
MSH5-206ENST00000423982 CKS1BP61024 79 aa10.8□□□□□ -0.68
MSH5-206ENST00000423982 GPHB5Q86YW7 130 aa10.8□□□□□ -0.68
MSH5-206ENST00000423982 CDIP1Q9H305 208 aa10.8□□□□□ -0.68
MSH5-206ENST00000423982 JPT2Q9H910 190 aa10.8□□□□□ -0.68
MSH5-206ENST00000423982 CENPVL3A0A0U1RRI6 287 aa10.79□□□□□ -0.68
MSH5-206ENST00000423982 C11orf86A6NJI1 115 aa10.79□□□□□ -0.68
MSH5-206ENST00000423982 TSHBP01222 138 aa10.79□□□□□ -0.68
MSH5-206ENST00000423982 RNASE4P34096 147 aaKnown RBP10.79□□□□□ -0.68
MSH5-206ENST00000423982 Q6ZS46 218 aa10.79□□□□□ -0.68
MSH5-206ENST00000423982 EEF1AKMT3Q96AZ1 226 aa10.79□□□□□ -0.68
MSH5-206ENST00000423982 A0A1B0GV72 72 aa10.79□□□□□ -0.68
MSH5-206ENST00000423982 ARL3P36405 182 aa10.79□□□□□ -0.68
MSH5-206ENST00000423982 RPL39P62891 51 aaKnown RBP10.79□□□□□ -0.68
MSH5-206ENST00000423982 MINOS1Q5TGZ0 78 aa10.79□□□□□ -0.68
MSH5-206ENST00000423982 C1QTNF4Q9BXJ3 329 aa10.79□□□□□ -0.68
MSH5-206ENST00000423982 DPH3P1Q9H4G8 78 aa10.79□□□□□ -0.68
MSH5-206ENST00000423982 MINOS1-NBL1R4GNA1 71 aa10.79□□□□□ -0.68
MSH5-206ENST00000423982 CR1P17927 2039 aa10.79□□□□□ -0.68
MSH5-206ENST00000423982 MT-ATP8P03928 68 aa10.78□□□□□ -0.68
MSH5-206ENST00000423982 DLX4Q92988 240 aaPredicted RBP10.78□□□□□ -0.68
MSH5-206ENST00000423982 U3KQE9 123 aa10.78□□□□□ -0.68
MSH5-206ENST00000423982 UBE2D1P51668 147 aa10.78□□□□□ -0.68
MSH5-206ENST00000423982 TSPEAR-AS2P59090 65 aa10.78□□□□□ -0.68
MSH5-206ENST00000423982 LINC01619G3V211 115 aa10.78□□□□□ -0.68
MSH5-206ENST00000423982 RPL11P62913 178 aaKnown RBP10.78□□□□□ -0.68
MSH5-206ENST00000423982 IGLV4-69A0A075B6H9 119 aa10.77□□□□□ -0.69
MSH5-206ENST00000423982 CD7P09564 240 aa10.77□□□□□ -0.69
MSH5-206ENST00000423982 C1orf122Q6ZSJ8 110 aa10.77□□□□□ -0.69
MSH5-206ENST00000423982 LINC01356Q8N9X3 169 aa10.77□□□□□ -0.69
MSH5-206ENST00000423982 MRPL53Q96EL3 112 aaKnown RBP10.77□□□□□ -0.69
MSH5-206ENST00000423982 CARD19Q96LW7 228 aa10.77□□□□□ -0.69
MSH5-206ENST00000423982 NF1P21359 2839 aa10.77□□□□□ -0.69
MSH5-206ENST00000423982 OOSP1A8MZH6 123 aa10.77□□□□□ -0.69
MSH5-206ENST00000423982 RNASE3P12724 160 aaKnown RBP10.77□□□□□ -0.69
MSH5-206ENST00000423982 ASIPP42127 132 aa10.77□□□□□ -0.69
MSH5-206ENST00000423982 LRRC75A-AS1Q8N1F1 130 aa10.77□□□□□ -0.69
MSH5-206ENST00000423982 TP53TG1Q9Y2A0 90 aa10.77□□□□□ -0.69
MSH5-206ENST00000423982 NPFFO15130 113 aa10.76□□□□□ -0.69
MSH5-206ENST00000423982 IGHV4-31P0DP07 118 aa10.76□□□□□ -0.69
MSH5-206ENST00000423982 SRD5A1P18405 259 aa10.76□□□□□ -0.69
MSH5-206ENST00000423982 UBE2E1P51965 193 aa10.76□□□□□ -0.69
MSH5-206ENST00000423982 TRAV26-1A0A087WT03 109 aa10.76□□□□□ -0.69
MSH5-206ENST00000423982 TCL1BO95988 128 aa10.76□□□□□ -0.69
MSH5-206ENST00000423982 XGP55808 180 aa10.76□□□□□ -0.69
MSH5-206ENST00000423982 TRAV21A0A0B4J279 112 aa10.75□□□□□ -0.69
MSH5-206ENST00000423982 A0A0J9YY99 117 aa10.75□□□□□ -0.69
MSH5-206ENST00000423982 A0A087WWL8 130 aa10.75□□□□□ -0.69
MSH5-206ENST00000423982 TRBV7-1A0A0A6YYK4 115 aa10.75□□□□□ -0.69
MSH5-206ENST00000423982 IGHV3-11P01762 117 aa10.75□□□□□ -0.69
MSH5-206ENST00000423982 SPINK8P0C7L1 97 aa10.75□□□□□ -0.69
MSH5-206ENST00000423982 NDUFA11Q86Y39 141 aa10.75□□□□□ -0.69
MSH5-206ENST00000423982 KIR2DL4Q99706 377 aa10.75□□□□□ -0.69
MSH5-206ENST00000423982 EDN2P20800 178 aa10.74□□□□□ -0.69
MSH5-206ENST00000423982 UBE2D3P61077 147 aa10.74□□□□□ -0.69
MSH5-206ENST00000423982 UBE2D2P62837 147 aa10.74□□□□□ -0.69
MSH5-206ENST00000423982 C9orf139Q6ZV77 190 aa10.74□□□□□ -0.69
MSH5-206ENST00000423982 OR10J6PQ8NGY7 276 aa10.74□□□□□ -0.69
MSH5-206ENST00000423982 SETD2Q9BYW2 2564 aaPredicted RBP10.74□□□□□ -0.69
MSH5-206ENST00000423982 IGHV1-69DA0A0B4J2H0 117 aa10.73□□□□□ -0.69
MSH5-206ENST00000423982 TMEM238LA0A1B0GVL6 79 aa10.73□□□□□ -0.69
MSH5-206ENST00000423982 A6NJY4 79 aa10.73□□□□□ -0.69
MSH5-206ENST00000423982 IGHV1-69P01742 117 aa10.73□□□□□ -0.69
MSH5-206ENST00000423982 CFC1BP0CG36 223 aa10.73□□□□□ -0.69
MSH5-206ENST00000423982 CFC1P0CG37 223 aa10.73□□□□□ -0.69
MSH5-206ENST00000423982 TMEM170BQ5T4T1 132 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms