RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 SPANXN1Q5VSR9 72 aa6.78□□□□□ -1.32
SNX20-203ENST00000423026 APRG1Q8IVJ8 170 aa6.78□□□□□ -1.32
SNX20-203ENST00000423026 ZNF418Q8TF45 676 aaPredicted RBP6.78□□□□□ -1.32
SNX20-203ENST00000423026 ZNF479Q96JC4 524 aa6.78□□□□□ -1.32
SNX20-203ENST00000423026 PRELID3AQ96N28 172 aa6.78□□□□□ -1.32
SNX20-203ENST00000423026 ESM1Q9NQ30 184 aa6.78□□□□□ -1.32
SNX20-203ENST00000423026 LEPP41159 167 aa6.77□□□□□ -1.33
SNX20-203ENST00000423026 SPANXB1Q9NS25 103 aaPredicted RBP6.77□□□□□ -1.33
SNX20-203ENST00000423026 TMEM160Q9NX00 188 aa6.77□□□□□ -1.33
SNX20-203ENST00000423026 U3KQK5 164 aa6.77□□□□□ -1.33
SNX20-203ENST00000423026 ITPR2Q14571 2701 aa6.77□□□□□ -1.33
SNX20-203ENST00000423026 DUSP14O95147 198 aaKnown RBP6.76□□□□□ -1.33
SNX20-203ENST00000423026 RNASE1P07998 156 aaKnown RBP6.76□□□□□ -1.33
SNX20-203ENST00000423026 ASIPP42127 132 aa6.76□□□□□ -1.33
SNX20-203ENST00000423026 ODF3Q96PU9 254 aa6.76□□□□□ -1.33
SNX20-203ENST00000423026 PGPEP1Q9NXJ5 209 aa6.76□□□□□ -1.33
SNX20-203ENST00000423026 MSRB1Q9NZV6 116 aa6.76□□□□□ -1.33
SNX20-203ENST00000423026 H3BVH4 76 aa6.76□□□□□ -1.33
SNX20-203ENST00000423026 ANXA2RQ3ZCQ2 193 aa6.76□□□□□ -1.33
SNX20-203ENST00000423026 Q6ZQT7 251 aa6.76□□□□□ -1.33
SNX20-203ENST00000423026 DYNLRB2Q8TF09 96 aa6.76□□□□□ -1.33
SNX20-203ENST00000423026 SPAG8Q99932 426 aaPredicted RBP6.76□□□□□ -1.33
SNX20-203ENST00000423026 ZNF469Q96JG9 3925 aaPredicted RBP6.76□□□□□ -1.33
SNX20-203ENST00000423026 UNC79Q9P2D8 2635 aa6.75□□□□□ -1.33
SNX20-203ENST00000423026 IGHV4-4A0A075B6R2 117 aa6.75□□□□□ -1.33
SNX20-203ENST00000423026 A0A096LNJ9 63 aa6.75□□□□□ -1.33
SNX20-203ENST00000423026 A0A0J9YX75 114 aa6.75□□□□□ -1.33
SNX20-203ENST00000423026 KLLNB2CW77 178 aa6.75□□□□□ -1.33
SNX20-203ENST00000423026 MED14OSP0DP75 135 aa6.75□□□□□ -1.33
SNX20-203ENST00000423026 FAM159AQ6UWV7 190 aa6.75□□□□□ -1.33
SNX20-203ENST00000423026 DUX3Q96PT4 197 aa6.75□□□□□ -1.33
SNX20-203ENST00000423026 TIMM8BQ9Y5J9 83 aaPredicted RBP6.75□□□□□ -1.33
SNX20-203ENST00000423026 ACANP16112 2415 aa6.75□□□□□ -1.33
SNX20-203ENST00000423026 TRAV2A0A0B4J234 112 aa6.75□□□□□ -1.33
SNX20-203ENST00000423026 LOC389332A0A1B0GUA5 103 aa6.75□□□□□ -1.33
SNX20-203ENST00000423026 HBDP02042 147 aa6.75□□□□□ -1.33
SNX20-203ENST00000423026 DLX4Q92988 240 aaPredicted RBP6.75□□□□□ -1.33
SNX20-203ENST00000423026 C16orf95Q9H693 158 aa6.75□□□□□ -1.33
SNX20-203ENST00000423026 PHLDA3Q9Y5J5 127 aa6.75□□□□□ -1.33
SNX20-203ENST00000423026 IFI27P40305 119 aaPredicted RBP6.74□□□□□ -1.33
SNX20-203ENST00000423026 WFDC2Q14508 124 aa6.74□□□□□ -1.33
SNX20-203ENST00000423026 RNF185Q96GF1 192 aa6.74□□□□□ -1.33
SNX20-203ENST00000423026 CYSLTR1Q9Y271 337 aa6.74□□□□□ -1.33
SNX20-203ENST00000423026 NOTCH2Q04721 2471 aa6.74□□□□□ -1.33
SNX20-203ENST00000423026 IGKV3-20P01619 116 aa6.74□□□□□ -1.33
SNX20-203ENST00000423026 HLA-DRB4P13762 266 aa6.74□□□□□ -1.33
SNX20-203ENST00000423026 EVI2AP22794 236 aa6.74□□□□□ -1.33
SNX20-203ENST00000423026 NMUP48645 174 aa6.74□□□□□ -1.33
SNX20-203ENST00000423026 HILS1P60008 231 aa6.74□□□□□ -1.33
SNX20-203ENST00000423026 PHLDA1Q8WV24 401 aaPredicted RBP6.74□□□□□ -1.33
SNX20-203ENST00000423026 IFI27L1Q96BM0 104 aa6.74□□□□□ -1.33
SNX20-203ENST00000423026 TM2D2Q9BX73 214 aa6.74□□□□□ -1.33
SNX20-203ENST00000423026 MAP1LC3AQ9H492 121 aa6.74□□□□□ -1.33
SNX20-203ENST00000423026 HLA-DRB4X5D2U9 266 aa6.74□□□□□ -1.33
SNX20-203ENST00000423026 TRAV12-3A0A0B4J271 114 aa6.73□□□□□ -1.33
SNX20-203ENST00000423026 E9PLD3 99 aa6.73□□□□□ -1.33
SNX20-203ENST00000423026 SMKR1H3BMG3 65 aa6.73□□□□□ -1.33
SNX20-203ENST00000423026 NPYP01303 97 aa6.73□□□□□ -1.33
SNX20-203ENST00000423026 CD28P10747 220 aa6.73□□□□□ -1.33
SNX20-203ENST00000423026 PCP2Q8IVA1 136 aa6.73□□□□□ -1.33
SNX20-203ENST00000423026 C11orf44Q8N8P7 122 aa6.73□□□□□ -1.33
SNX20-203ENST00000423026 LINC01006Q8NI28 216 aa6.73□□□□□ -1.33
SNX20-203ENST00000423026 SORL1Q92673 2214 aa6.73□□□□□ -1.33
SNX20-203ENST00000423026 A0A1W2PRX2 142 aa6.72□□□□□ -1.33
SNX20-203ENST00000423026 M0R381 172 aa6.72□□□□□ -1.33
SNX20-203ENST00000423026 CCL24O00175 119 aa6.72□□□□□ -1.33
SNX20-203ENST00000423026 GNRH2O43555 120 aa6.72□□□□□ -1.33
SNX20-203ENST00000423026 GCSHP23434 173 aa6.72□□□□□ -1.33
SNX20-203ENST00000423026 GAGE5Q13069 117 aa6.72□□□□□ -1.33
SNX20-203ENST00000423026 GAGE6Q13070 117 aa6.72□□□□□ -1.33
SNX20-203ENST00000423026 ETDBQ3ZM63 59 aa6.72□□□□□ -1.33
SNX20-203ENST00000423026 TNFRSF6BO95407 300 aa6.72□□□□□ -1.33
SNX20-203ENST00000423026 SPINK8P0C7L1 97 aa6.72□□□□□ -1.33
SNX20-203ENST00000423026 FXYD2P54710 66 aa6.72□□□□□ -1.33
SNX20-203ENST00000423026 DEFB131AP59861 70 aa6.72□□□□□ -1.33
SNX20-203ENST00000423026 DEFB114Q30KQ6 69 aa6.72□□□□□ -1.33
SNX20-203ENST00000423026 SHISA2Q6UWI4 295 aa6.72□□□□□ -1.33
SNX20-203ENST00000423026 TMEM61Q8N0U2 210 aa6.72□□□□□ -1.33
SNX20-203ENST00000423026 RAX2Q96IS3 184 aa6.72□□□□□ -1.33
SNX20-203ENST00000423026 CHAC1Q9BUX1 264 aa6.72□□□□□ -1.33
SNX20-203ENST00000423026 ERG28Q9UKR5 140 aa6.72□□□□□ -1.33
SNX20-203ENST00000423026 AGRNO00468 2067 aa6.71□□□□□ -1.33
SNX20-203ENST00000423026 CD7P09564 240 aa6.71□□□□□ -1.33
SNX20-203ENST00000423026 TAL2Q16559 108 aa6.71□□□□□ -1.33
SNX20-203ENST00000423026 SH2D6Q7Z4S9 175 aa6.71□□□□□ -1.33
SNX20-203ENST00000423026 SMR3AQ99954 134 aa6.71□□□□□ -1.33
SNX20-203ENST00000423026 CITED2Q99967 270 aaPredicted RBP6.71□□□□□ -1.33
SNX20-203ENST00000423026 ZMAT4Q9H898 229 aa6.71□□□□□ -1.33
SNX20-203ENST00000423026 NXT2Q9NPJ8 142 aaKnown RBP6.71□□□□□ -1.33
SNX20-203ENST00000423026 SS18L2Q9UHA2 77 aa6.71□□□□□ -1.33
SNX20-203ENST00000423026 HIVEP2P31629 2446 aa6.71□□□□□ -1.34
SNX20-203ENST00000423026 TRAV25A0A0B4J276 109 aa6.71□□□□□ -1.34
SNX20-203ENST00000423026 NDUFA7O95182 113 aa6.71□□□□□ -1.34
SNX20-203ENST00000423026 LY6G6DO95868 133 aa6.71□□□□□ -1.34
SNX20-203ENST00000423026 RNASE3P12724 160 aaKnown RBP6.71□□□□□ -1.34
SNX20-203ENST00000423026 FHL3Q13643 280 aa6.71□□□□□ -1.34
SNX20-203ENST00000423026 SPINK13Q1W4C9 94 aa6.71□□□□□ -1.34
SNX20-203ENST00000423026 GAGE13Q4V321 117 aa6.71□□□□□ -1.34
SNX20-203ENST00000423026 CEND1Q8N111 149 aa6.71□□□□□ -1.34
SNX20-203ENST00000423026 DPH3P1Q9H4G8 78 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms