RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 FAM3BP58499 235 aaPredicted RBP10.92□□□□□ -0.66
BRAT1-202ENST00000421712 IFITM2Q01629 132 aa10.92□□□□□ -0.66
BRAT1-202ENST00000421712 SOHLH1Q5JUK2 328 aa10.92□□□□□ -0.66
BRAT1-202ENST00000421712 A0A1W2PPQ1 181 aa10.91□□□□□ -0.66
BRAT1-202ENST00000421712 F2Z2F3 143 aa10.91□□□□□ -0.66
BRAT1-202ENST00000421712 IGLC6P0CF74 106 aa10.91□□□□□ -0.66
BRAT1-202ENST00000421712 SMIM17P0DL12 118 aa10.91□□□□□ -0.66
BRAT1-202ENST00000421712 CACNG7P62955 275 aa10.91□□□□□ -0.66
BRAT1-202ENST00000421712 CLLU1Q5K131 121 aa10.91□□□□□ -0.66
BRAT1-202ENST00000421712 LYZL1Q6UWQ5 148 aa10.91□□□□□ -0.66
BRAT1-202ENST00000421712 Q6ZSN1 163 aa10.91□□□□□ -0.66
BRAT1-202ENST00000421712 HYDINQ4G0P3 5121 aa10.91□□□□□ -0.66
BRAT1-202ENST00000421712 NXPH4O95158 308 aa10.9□□□□□ -0.66
BRAT1-202ENST00000421712 CRYGDP07320 174 aa10.9□□□□□ -0.66
BRAT1-202ENST00000421712 ADIRFQ15847 76 aa10.9□□□□□ -0.66
BRAT1-202ENST00000421712 FAM231DQ6ZW35 169 aa10.9□□□□□ -0.66
BRAT1-202ENST00000421712 C14orf178Q8N769 122 aaPredicted RBP10.9□□□□□ -0.66
BRAT1-202ENST00000421712 C15orf54Q8N8G6 183 aa10.9□□□□□ -0.66
BRAT1-202ENST00000421712 NAT8Q9UHE5 227 aa10.9□□□□□ -0.66
BRAT1-202ENST00000421712 RYR2Q92736 4967 aa10.9□□□□□ -0.66
BRAT1-202ENST00000421712 A8MWL6 223 aa10.89□□□□□ -0.67
BRAT1-202ENST00000421712 F5H697 171 aa10.89□□□□□ -0.67
BRAT1-202ENST00000421712 ZNF56Q15929 161 aa10.89□□□□□ -0.67
BRAT1-202ENST00000421712 UFSP1Q6NVU6 142 aa10.89□□□□□ -0.67
BRAT1-202ENST00000421712 LYPD5Q6UWN5 251 aa10.89□□□□□ -0.67
BRAT1-202ENST00000421712 SH2D6Q7Z4S9 175 aa10.89□□□□□ -0.67
BRAT1-202ENST00000421712 VPS13DQ5THJ4 4388 aa10.88□□□□□ -0.67
BRAT1-202ENST00000421712 GAGE12JA6NER3 117 aa10.88□□□□□ -0.67
BRAT1-202ENST00000421712 RPL23P62829 140 aaKnown RBP10.88□□□□□ -0.67
BRAT1-202ENST00000421712 GAGE1Q13065 139 aa10.88□□□□□ -0.67
BRAT1-202ENST00000421712 GAGE4Q13068 117 aa10.88□□□□□ -0.67
BRAT1-202ENST00000421712 GAGE5Q13069 117 aa10.88□□□□□ -0.67
BRAT1-202ENST00000421712 GAGE13Q4V321 117 aa10.88□□□□□ -0.67
BRAT1-202ENST00000421712 ZNRF2Q8NHG8 242 aa10.88□□□□□ -0.67
BRAT1-202ENST00000421712 AP1S3Q96PC3 154 aa10.88□□□□□ -0.67
BRAT1-202ENST00000421712 Q9H8V8 135 aa10.88□□□□□ -0.67
BRAT1-202ENST00000421712 MRPS16Q9Y3D3 137 aaKnown RBP10.88□□□□□ -0.67
BRAT1-202ENST00000421712 NTF3P20783 257 aa10.87□□□□□ -0.67
BRAT1-202ENST00000421712 TWIST1Q15672 202 aa10.87□□□□□ -0.67
BRAT1-202ENST00000421712 PGLYRP4Q96LB8 373 aa10.87□□□□□ -0.67
BRAT1-202ENST00000421712 OSTCQ9NRP0 149 aa10.87□□□□□ -0.67
BRAT1-202ENST00000421712 MSRB1Q9NZV6 116 aa10.87□□□□□ -0.67
BRAT1-202ENST00000421712 MGPP08493 103 aa10.86□□□□□ -0.67
BRAT1-202ENST00000421712 TRGC1P0CF51 173 aa10.86□□□□□ -0.67
BRAT1-202ENST00000421712 RAB4BP61018 213 aa10.86□□□□□ -0.67
BRAT1-202ENST00000421712 OR10G8Q8NGN5 311 aa10.86□□□□□ -0.67
BRAT1-202ENST00000421712 ATP6V0E2Q8NHE4 81 aa10.86□□□□□ -0.67
BRAT1-202ENST00000421712 ISOC2Q96AB3 205 aa10.86□□□□□ -0.67
BRAT1-202ENST00000421712 BORCS7Q96B45 105 aa10.86□□□□□ -0.67
BRAT1-202ENST00000421712 KMT2AQ03164 3969 aa10.85□□□□□ -0.67
BRAT1-202ENST00000421712 CTRLP40313 264 aa10.85□□□□□ -0.67
BRAT1-202ENST00000421712 CT83Q5H943 113 aa10.85□□□□□ -0.67
BRAT1-202ENST00000421712 WDR73Q6P4I2 378 aa10.85□□□□□ -0.67
BRAT1-202ENST00000421712 GTSF1Q8WW33 167 aa10.85□□□□□ -0.67
BRAT1-202ENST00000421712 UPK3BQ9BT76 320 aa10.85□□□□□ -0.67
BRAT1-202ENST00000421712 SMIM15Q7Z3B0 74 aa10.84□□□□□ -0.67
BRAT1-202ENST00000421712 TSKUQ8WUA8 353 aa10.84□□□□□ -0.67
BRAT1-202ENST00000421712 Q9UF83 564 aa10.84□□□□□ -0.67
BRAT1-202ENST00000421712 SIVA1O15304 175 aa10.83□□□□□ -0.68
BRAT1-202ENST00000421712 EVI2AP22794 236 aa10.83□□□□□ -0.68
BRAT1-202ENST00000421712 RPL36AP83881 106 aaKnown RBP10.83□□□□□ -0.68
BRAT1-202ENST00000421712 RPL36ALQ969Q0 106 aaKnown RBP10.83□□□□□ -0.68
BRAT1-202ENST00000421712 TRBV10-1A0A0K0K1A3 114 aa10.82□□□□□ -0.68
BRAT1-202ENST00000421712 NBDYA0A0U1RRE5 68 aa10.82□□□□□ -0.68
BRAT1-202ENST00000421712 HIGD1CA8MV81 97 aa10.82□□□□□ -0.68
BRAT1-202ENST00000421712 GFRA4Q9GZZ7 299 aa10.82□□□□□ -0.68
BRAT1-202ENST00000421712 GTSF1LQ9H1H1 148 aa10.82□□□□□ -0.68
BRAT1-202ENST00000421712 DPH3P1Q9H4G8 78 aa10.82□□□□□ -0.68
BRAT1-202ENST00000421712 KIF25-AS1Q9Y6Z4 181 aa10.82□□□□□ -0.68
BRAT1-202ENST00000421712 V9GYV3 84 aa10.82□□□□□ -0.68
BRAT1-202ENST00000421712 TRAV8-6A0A0B4J262 113 aa10.81□□□□□ -0.68
BRAT1-202ENST00000421712 FOXA3P55318 350 aaPredicted RBP10.81□□□□□ -0.68
BRAT1-202ENST00000421712 OR10J3Q5JRS4 329 aa10.81□□□□□ -0.68
BRAT1-202ENST00000421712 BIRC6Q9NR09 4857 aa10.8□□□□□ -0.68
BRAT1-202ENST00000421712 TRBV7-3A0A075B6L6 115 aa10.8□□□□□ -0.68
BRAT1-202ENST00000421712 FAM231BA6NCW3 169 aa10.8□□□□□ -0.68
BRAT1-202ENST00000421712 TIRAPP58753 221 aa10.8□□□□□ -0.68
BRAT1-202ENST00000421712 TTC32Q5I0X7 151 aa10.8□□□□□ -0.68
BRAT1-202ENST00000421712 UQCC3Q6UW78 93 aa10.8□□□□□ -0.68
BRAT1-202ENST00000421712 COMMD7Q86VX2 200 aa10.8□□□□□ -0.68
BRAT1-202ENST00000421712 CNFNQ9BYD5 112 aa10.8□□□□□ -0.68
BRAT1-202ENST00000421712 A0A1B0GUT8 65 aa10.79□□□□□ -0.68
BRAT1-202ENST00000421712 H7C1H1 209 aa10.79□□□□□ -0.68
BRAT1-202ENST00000421712 LINC00315P59091 139 aa10.79□□□□□ -0.68
BRAT1-202ENST00000421712 LELP1Q5T871 98 aa10.79□□□□□ -0.68
BRAT1-202ENST00000421712 C1orf134Q5TEV5 83 aa10.79□□□□□ -0.68
BRAT1-202ENST00000421712 Q6ZR54 194 aa10.79□□□□□ -0.68
BRAT1-202ENST00000421712 WFDC10BQ8IUB3 73 aa10.79□□□□□ -0.68
BRAT1-202ENST00000421712 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.79□□□□□ -0.68
BRAT1-202ENST00000421712 NEXN-AS1Q8NBZ9 246 aa10.79□□□□□ -0.68
BRAT1-202ENST00000421712 DNAH6Q9C0G6 4158 aa10.79□□□□□ -0.68
BRAT1-202ENST00000421712 TRAV9-2A0A087WT02 112 aa10.78□□□□□ -0.68
BRAT1-202ENST00000421712 PNRC1Q12796 327 aaPredicted RBP10.78□□□□□ -0.68
BRAT1-202ENST00000421712 RIGQ13278 110 aa10.78□□□□□ -0.68
BRAT1-202ENST00000421712 SUMO4Q6EEV6 95 aa10.78□□□□□ -0.68
BRAT1-202ENST00000421712 NAT8BQ9UHF3 227 aa10.78□□□□□ -0.68
BRAT1-202ENST00000421712 TNFRSF18Q9Y5U5 241 aa10.78□□□□□ -0.68
BRAT1-202ENST00000421712 F8W036 122 aa10.77□□□□□ -0.69
BRAT1-202ENST00000421712 LINC00694P0DN24 101 aa10.77□□□□□ -0.69
BRAT1-202ENST00000421712 NUP35Q8NFH5 326 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms