RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 RPL19P84098 196 aaKnown RBP5.04□□□□□ -1.6
HLA-DPA1-241ENST00000417724 MIAQ16674 131 aa5.04□□□□□ -1.6
HLA-DPA1-241ENST00000417724 SDIM1Q6ZPB5 146 aa5.04□□□□□ -1.6
HLA-DPA1-241ENST00000417724 C15orf54Q8N8G6 183 aa5.04□□□□□ -1.6
HLA-DPA1-241ENST00000417724 OR11H4Q8NGC9 324 aa5.04□□□□□ -1.6
HLA-DPA1-241ENST00000417724 PPP1R1CQ8WVI7 109 aa5.04□□□□□ -1.6
HLA-DPA1-241ENST00000417724 A0A087WWL8 130 aa5.03□□□□□ -1.6
HLA-DPA1-241ENST00000417724 TRBV6-8A0A0A6YYG3 113 aa5.03□□□□□ -1.6
HLA-DPA1-241ENST00000417724 H3BVH4 76 aa5.03□□□□□ -1.6
HLA-DPA1-241ENST00000417724 ARMS2P0C7Q2 107 aa5.03□□□□□ -1.6
HLA-DPA1-241ENST00000417724 GCHFRP30047 84 aa5.03□□□□□ -1.6
HLA-DPA1-241ENST00000417724 CDC34P49427 236 aaPredicted RBP5.03□□□□□ -1.6
HLA-DPA1-241ENST00000417724 UBE2D3P61077 147 aa5.03□□□□□ -1.6
HLA-DPA1-241ENST00000417724 PKIAP61925 76 aa5.03□□□□□ -1.6
HLA-DPA1-241ENST00000417724 UBE2D2P62837 147 aa5.03□□□□□ -1.6
HLA-DPA1-241ENST00000417724 DNLZQ5SXM8 178 aa5.03□□□□□ -1.6
HLA-DPA1-241ENST00000417724 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.03□□□□□ -1.6
HLA-DPA1-241ENST00000417724 CLRN3Q8NCR9 226 aa5.03□□□□□ -1.6
HLA-DPA1-241ENST00000417724 SUN5Q8TC36 379 aa5.03□□□□□ -1.6
HLA-DPA1-241ENST00000417724 SFRP2Q96HF1 295 aa5.03□□□□□ -1.6
HLA-DPA1-241ENST00000417724 CCDC32Q9BV29 185 aa5.03□□□□□ -1.6
HLA-DPA1-241ENST00000417724 PHLDA3Q9Y5J5 127 aa5.03□□□□□ -1.6
HLA-DPA1-241ENST00000417724 PANO1I0J062 215 aa5.02□□□□□ -1.61
HLA-DPA1-241ENST00000417724 MPC2O95563 127 aa5.02□□□□□ -1.61
HLA-DPA1-241ENST00000417724 STAG3L2P0CL84 134 aa5.02□□□□□ -1.61
HLA-DPA1-241ENST00000417724 STAG3L3P0CL85 134 aa5.02□□□□□ -1.61
HLA-DPA1-241ENST00000417724 H2BFSP57053 126 aa5.02□□□□□ -1.61
HLA-DPA1-241ENST00000417724 MPV17L2Q567V2 206 aa5.02□□□□□ -1.61
HLA-DPA1-241ENST00000417724 RAB24Q969Q5 203 aa5.02□□□□□ -1.61
HLA-DPA1-241ENST00000417724 CHCHD5Q9BSY4 110 aa5.02□□□□□ -1.61
HLA-DPA1-241ENST00000417724 WFDC1Q9HC57 220 aa5.02□□□□□ -1.61
HLA-DPA1-241ENST00000417724 TMEM167BQ9NRX6 74 aa5.02□□□□□ -1.61
HLA-DPA1-241ENST00000417724 TRAV34A0A0B4J273 112 aa5.01□□□□□ -1.61
HLA-DPA1-241ENST00000417724 GRIFINA4D1Z8 144 aa5.01□□□□□ -1.61
HLA-DPA1-241ENST00000417724 KRBOX1C9JBD0 128 aa5.01□□□□□ -1.61
HLA-DPA1-241ENST00000417724 M0R036 132 aa5.01□□□□□ -1.61
HLA-DPA1-241ENST00000417724 M0R381 172 aa5.01□□□□□ -1.61
HLA-DPA1-241ENST00000417724 PTTG1O95997 202 aa5.01□□□□□ -1.61
HLA-DPA1-241ENST00000417724 CXorf1O96002 111 aa5.01□□□□□ -1.61
HLA-DPA1-241ENST00000417724 IFNA7P01567 189 aa5.01□□□□□ -1.61
HLA-DPA1-241ENST00000417724 TPT1P13693 172 aaKnown RBP5.01□□□□□ -1.61
HLA-DPA1-241ENST00000417724 CIRBPQ14011 172 aaKnown RBP5.01□□□□□ -1.61
HLA-DPA1-241ENST00000417724 OR10G8Q8NGN5 311 aa5.01□□□□□ -1.61
HLA-DPA1-241ENST00000417724 RNF185Q96GF1 192 aa5.01□□□□□ -1.61
HLA-DPA1-241ENST00000417724 ARL2-SNX15V9GYD0 113 aa5.01□□□□□ -1.61
HLA-DPA1-241ENST00000417724 A0A087WYN8 130 aa5□□□□□ -1.61
HLA-DPA1-241ENST00000417724 TRAV16A0A0A6YYK6 109 aaPredicted RBP5□□□□□ -1.61
HLA-DPA1-241ENST00000417724 A0A1W2PRE2 83 aa5□□□□□ -1.61
HLA-DPA1-241ENST00000417724 MBP02144 154 aa5□□□□□ -1.61
HLA-DPA1-241ENST00000417724 RAB4BP61018 213 aa5□□□□□ -1.61
HLA-DPA1-241ENST00000417724 CNBPP62633 177 aaKnown RBP5□□□□□ -1.61
HLA-DPA1-241ENST00000417724 TMEM97Q5BJF2 176 aa5□□□□□ -1.61
HLA-DPA1-241ENST00000417724 ZFP82Q8N141 532 aa5□□□□□ -1.61
HLA-DPA1-241ENST00000417724 LINC00269Q8N2A0 174 aa5□□□□□ -1.61
HLA-DPA1-241ENST00000417724 ENKURQ8TC29 256 aa5□□□□□ -1.61
HLA-DPA1-241ENST00000417724 C7orf33Q8WU49 177 aa5□□□□□ -1.61
HLA-DPA1-241ENST00000417724 LINC01600Q96MT4 127 aa5□□□□□ -1.61
HLA-DPA1-241ENST00000417724 PRR34Q9NV39 138 aa5□□□□□ -1.61
HLA-DPA1-241ENST00000417724 RNF213Q63HN8 5207 aa5□□□□□ -1.61
HLA-DPA1-241ENST00000417724 PKHD1L1Q86WI1 4243 aa4.99□□□□□ -1.61
HLA-DPA1-241ENST00000417724 IGHV3-64A0A075B6Q5 118 aa4.99□□□□□ -1.61
HLA-DPA1-241ENST00000417724 hDV102S1A0JD36 115 aa4.99□□□□□ -1.61
HLA-DPA1-241ENST00000417724 INMT-MINDY4F8WBC2 141 aa4.99□□□□□ -1.61
HLA-DPA1-241ENST00000417724 CRIP1P50238 77 aa4.99□□□□□ -1.61
HLA-DPA1-241ENST00000417724 SERF2P84101 59 aa4.99□□□□□ -1.61
HLA-DPA1-241ENST00000417724 FAM162BQ5T6X4 162 aa4.99□□□□□ -1.61
HLA-DPA1-241ENST00000417724 KRTAP26-1Q6PEX3 210 aa4.99□□□□□ -1.61
HLA-DPA1-241ENST00000417724 PSMG3Q9BT73 122 aaPredicted RBP4.99□□□□□ -1.61
HLA-DPA1-241ENST00000417724 NKX6-2Q9C056 277 aaPredicted RBP4.99□□□□□ -1.61
HLA-DPA1-241ENST00000417724 ACTR3CQ9C0K3 210 aaPredicted RBP4.99□□□□□ -1.61
HLA-DPA1-241ENST00000417724 AP5S1Q9NUS5 200 aa4.99□□□□□ -1.61
HLA-DPA1-241ENST00000417724 ZFP30Q9Y2G7 519 aa4.99□□□□□ -1.61
HLA-DPA1-241ENST00000417724 TMSB15BA0A087X1C1 80 aa4.98□□□□□ -1.61
HLA-DPA1-241ENST00000417724 A6NHS1 94 aa4.98□□□□□ -1.61
HLA-DPA1-241ENST00000417724 PEX7O00628 323 aa4.98□□□□□ -1.61
HLA-DPA1-241ENST00000417724 SSNA1O43805 119 aa4.98□□□□□ -1.61
HLA-DPA1-241ENST00000417724 SH2D1AO60880 128 aa4.98□□□□□ -1.61
HLA-DPA1-241ENST00000417724 ATP6V0CP27449 155 aa4.98□□□□□ -1.61
HLA-DPA1-241ENST00000417724 RBX1P62877 108 aa4.98□□□□□ -1.61
HLA-DPA1-241ENST00000417724 LRP2P98164 4655 aa4.98□□□□□ -1.61
HLA-DPA1-241ENST00000417724 ZNF56Q15929 161 aa4.98□□□□□ -1.61
HLA-DPA1-241ENST00000417724 PRR27Q6MZM9 219 aa4.98□□□□□ -1.61
HLA-DPA1-241ENST00000417724 CLPSL2Q6UWE3 100 aa4.98□□□□□ -1.61
HLA-DPA1-241ENST00000417724 COX8CQ7Z4L0 72 aa4.98□□□□□ -1.61
HLA-DPA1-241ENST00000417724 Q86TA4 180 aa4.98□□□□□ -1.61
HLA-DPA1-241ENST00000417724 NEXN-AS1Q8NBZ9 246 aa4.98□□□□□ -1.61
HLA-DPA1-241ENST00000417724 HIST1H2BAQ96A08 127 aa4.98□□□□□ -1.61
HLA-DPA1-241ENST00000417724 TNFSF18Q9UNG2 199 aa4.98□□□□□ -1.61
HLA-DPA1-241ENST00000417724 IGLV10-54A0A075B6I4 117 aa4.97□□□□□ -1.61
HLA-DPA1-241ENST00000417724 TRBV25-1A0A075B6N4 114 aa4.97□□□□□ -1.61
HLA-DPA1-241ENST00000417724 TRAV8-4A0A0B4J246 113 aa4.97□□□□□ -1.61
HLA-DPA1-241ENST00000417724 F5H697 171 aa4.97□□□□□ -1.61
HLA-DPA1-241ENST00000417724 PHOX2AO14813 284 aa4.97□□□□□ -1.61
HLA-DPA1-241ENST00000417724 P01737 135 aa4.97□□□□□ -1.61
HLA-DPA1-241ENST00000417724 CHTF8P0CG12 524 aa4.97□□□□□ -1.61
HLA-DPA1-241ENST00000417724 GZMBP10144 247 aa4.97□□□□□ -1.61
HLA-DPA1-241ENST00000417724 REG3AQ06141 175 aa4.97□□□□□ -1.61
HLA-DPA1-241ENST00000417724 GAGE6Q13070 117 aa4.97□□□□□ -1.61
HLA-DPA1-241ENST00000417724 ZNF674Q2M3X9 581 aa4.97□□□□□ -1.61
HLA-DPA1-241ENST00000417724 LINC01559Q495D7 138 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms