RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 IFITM2Q01629 132 aa16.01■□□□□ 0.15
SMARCB1-205ENST00000417137 ESRGQ1W209 222 aa16.01■□□□□ 0.15
SMARCB1-205ENST00000417137 SOHLH1Q5JUK2 328 aa16.01■□□□□ 0.15
SMARCB1-205ENST00000417137 FAM74A4Q5TZK3 123 aa16.01■□□□□ 0.15
SMARCB1-205ENST00000417137 SAMD10Q9BYL1 202 aa16.01■□□□□ 0.15
SMARCB1-205ENST00000417137 LINC00588Q9Y4M8 146 aa16.01■□□□□ 0.15
SMARCB1-205ENST00000417137 MUC21A0A0G2JKD1 596 aa16■□□□□ 0.15
SMARCB1-205ENST00000417137 MUC21A0A140T8X8 626 aa16■□□□□ 0.15
SMARCB1-205ENST00000417137 UFSP1Q6NVU6 142 aa16■□□□□ 0.15
SMARCB1-205ENST00000417137 NAT8Q9UHE5 227 aa16■□□□□ 0.15
SMARCB1-205ENST00000417137 A0A087WWL8 130 aa15.99■□□□□ 0.15
SMARCB1-205ENST00000417137 A8MWL6 223 aa15.99■□□□□ 0.15
SMARCB1-205ENST00000417137 CRYGDP07320 174 aa15.99■□□□□ 0.15
SMARCB1-205ENST00000417137 SSTP61278 116 aa15.99■□□□□ 0.15
SMARCB1-205ENST00000417137 WDR73Q6P4I2 378 aa15.98■□□□□ 0.15
SMARCB1-205ENST00000417137 LYZL1Q6UWQ5 148 aa15.98■□□□□ 0.15
SMARCB1-205ENST00000417137 C15orf54Q8N8G6 183 aa15.98■□□□□ 0.15
SMARCB1-205ENST00000417137 SMIM17P0DL12 118 aa15.97■□□□□ 0.15
SMARCB1-205ENST00000417137 CT83Q5H943 113 aa15.97■□□□□ 0.15
SMARCB1-205ENST00000417137 OSTCQ9NRP0 149 aa15.97■□□□□ 0.15
SMARCB1-205ENST00000417137 LOC100131303A0A0U1RQF7 123 aa15.96■□□□□ 0.15
SMARCB1-205ENST00000417137 LYPD5Q6UWN5 251 aa15.96■□□□□ 0.15
SMARCB1-205ENST00000417137 Q6ZSN1 163 aa15.96■□□□□ 0.15
SMARCB1-205ENST00000417137 AP1S3Q96PC3 154 aa15.96■□□□□ 0.15
SMARCB1-205ENST00000417137 MRPS16Q9Y3D3 137 aaKnown RBP15.96■□□□□ 0.15
SMARCB1-205ENST00000417137 RPL23P62829 140 aaKnown RBP15.95■□□□□ 0.14
SMARCB1-205ENST00000417137 ADIRFQ15847 76 aa15.95■□□□□ 0.14
SMARCB1-205ENST00000417137 ZNRF2Q8NHG8 242 aa15.95■□□□□ 0.14
SMARCB1-205ENST00000417137 UPK3BQ9BT76 320 aa15.95■□□□□ 0.14
SMARCB1-205ENST00000417137 CTRLP40313 264 aa15.94■□□□□ 0.14
SMARCB1-205ENST00000417137 RAB4BP61018 213 aa15.94■□□□□ 0.14
SMARCB1-205ENST00000417137 C14orf178Q8N769 122 aaPredicted RBP15.94■□□□□ 0.14
SMARCB1-205ENST00000417137 ISOC2Q96AB3 205 aa15.94■□□□□ 0.14
SMARCB1-205ENST00000417137 TRGC1P0CF51 173 aa15.93■□□□□ 0.14
SMARCB1-205ENST00000417137 Q9H8V8 135 aa15.93■□□□□ 0.14
SMARCB1-205ENST00000417137 NACAE9PAV3 2078 aa15.92■□□□□ 0.14
SMARCB1-205ENST00000417137 IGLV2-18A0A075B6J9 118 aa15.92■□□□□ 0.14
SMARCB1-205ENST00000417137 NTF3P20783 257 aa15.92■□□□□ 0.14
SMARCB1-205ENST00000417137 ZNF56Q15929 161 aa15.92■□□□□ 0.14
SMARCB1-205ENST00000417137 F5H697 171 aa15.91■□□□□ 0.14
SMARCB1-205ENST00000417137 FOXA3P55318 350 aaPredicted RBP15.91■□□□□ 0.14
SMARCB1-205ENST00000417137 TWIST1Q15672 202 aa15.91■□□□□ 0.14
SMARCB1-205ENST00000417137 OR10G8Q8NGN5 311 aa15.91■□□□□ 0.14
SMARCB1-205ENST00000417137 TSKUQ8WUA8 353 aa15.91■□□□□ 0.14
SMARCB1-205ENST00000417137 GTSF1Q8WW33 167 aa15.91■□□□□ 0.14
SMARCB1-205ENST00000417137 CNFNQ9BYD5 112 aa15.91■□□□□ 0.14
SMARCB1-205ENST00000417137 GFRA4Q9GZZ7 299 aa15.91■□□□□ 0.14
SMARCB1-205ENST00000417137 MSRB1Q9NZV6 116 aa15.91■□□□□ 0.14
SMARCB1-205ENST00000417137 TRBV10-1A0A0K0K1A3 114 aa15.9■□□□□ 0.14
SMARCB1-205ENST00000417137 FAM231BA6NCW3 169 aa15.9■□□□□ 0.14
SMARCB1-205ENST00000417137 TIRAPP58753 221 aa15.9■□□□□ 0.14
SMARCB1-205ENST00000417137 ATP6V0E2Q8NHE4 81 aa15.9■□□□□ 0.14
SMARCB1-205ENST00000417137 BORCS7Q96B45 105 aa15.9■□□□□ 0.14
SMARCB1-205ENST00000417137 GAGE12JA6NER3 117 aa15.89■□□□□ 0.13
SMARCB1-205ENST00000417137 M0R2N4 97 aa15.89■□□□□ 0.13
SMARCB1-205ENST00000417137 GAGE1Q13065 139 aa15.89■□□□□ 0.13
SMARCB1-205ENST00000417137 GAGE4Q13068 117 aa15.89■□□□□ 0.13
SMARCB1-205ENST00000417137 GAGE5Q13069 117 aa15.89■□□□□ 0.13
SMARCB1-205ENST00000417137 GAGE13Q4V321 117 aa15.89■□□□□ 0.13
SMARCB1-205ENST00000417137 UQCC3Q6UW78 93 aa15.89■□□□□ 0.13
SMARCB1-205ENST00000417137 KIF25-AS1Q9Y6Z4 181 aa15.89■□□□□ 0.13
SMARCB1-205ENST00000417137 SMIM15Q7Z3B0 74 aa15.88■□□□□ 0.13
SMARCB1-205ENST00000417137 PGLYRP4Q96LB8 373 aa15.88■□□□□ 0.13
SMARCB1-205ENST00000417137 V9GYV3 84 aa15.88■□□□□ 0.13
SMARCB1-205ENST00000417137 RPL36AP83881 106 aaKnown RBP15.87■□□□□ 0.13
SMARCB1-205ENST00000417137 RPL36ALQ969Q0 106 aaKnown RBP15.87■□□□□ 0.13
SMARCB1-205ENST00000417137 GTSF1LQ9H1H1 148 aa15.87■□□□□ 0.13
SMARCB1-205ENST00000417137 HYDINQ4G0P3 5121 aa15.87■□□□□ 0.13
SMARCB1-205ENST00000417137 VPS13DQ5THJ4 4388 aa15.87■□□□□ 0.13
SMARCB1-205ENST00000417137 NBDYA0A0U1RRE5 68 aa15.86■□□□□ 0.13
SMARCB1-205ENST00000417137 SIVA1O15304 175 aa15.86■□□□□ 0.13
SMARCB1-205ENST00000417137 MGPP08493 103 aa15.86■□□□□ 0.13
SMARCB1-205ENST00000417137 EVI2AP22794 236 aa15.86■□□□□ 0.13
SMARCB1-205ENST00000417137 DPH3P1Q9H4G8 78 aa15.86■□□□□ 0.13
SMARCB1-205ENST00000417137 HIGD1CA8MV81 97 aa15.85■□□□□ 0.13
SMARCB1-205ENST00000417137 LINC00315P59091 139 aa15.85■□□□□ 0.13
SMARCB1-205ENST00000417137 TTC32Q5I0X7 151 aa15.85■□□□□ 0.13
SMARCB1-205ENST00000417137 Q6ZR54 194 aa15.85■□□□□ 0.13
SMARCB1-205ENST00000417137 TRBV7-3A0A075B6L6 115 aa15.84■□□□□ 0.13
SMARCB1-205ENST00000417137 H7C1H1 209 aa15.84■□□□□ 0.13
SMARCB1-205ENST00000417137 LINC00694P0DN24 101 aa15.84■□□□□ 0.13
SMARCB1-205ENST00000417137 PNRC1Q12796 327 aaPredicted RBP15.84■□□□□ 0.13
SMARCB1-205ENST00000417137 Q9UF83 564 aa15.84■□□□□ 0.13
SMARCB1-205ENST00000417137 TRAV8-6A0A0B4J262 113 aa15.83■□□□□ 0.12
SMARCB1-205ENST00000417137 A0A1B0GUT8 65 aa15.83■□□□□ 0.12
SMARCB1-205ENST00000417137 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.83■□□□□ 0.12
SMARCB1-205ENST00000417137 NAT8BQ9UHF3 227 aa15.83■□□□□ 0.12
SMARCB1-205ENST00000417137 KMT2AQ03164 3969 aa15.83■□□□□ 0.12
SMARCB1-205ENST00000417137 LELP1Q5T871 98 aa15.82■□□□□ 0.12
SMARCB1-205ENST00000417137 A0A087WWC5 75 aa15.81■□□□□ 0.12
SMARCB1-205ENST00000417137 PPP1R2P9O14990 202 aa15.81■□□□□ 0.12
SMARCB1-205ENST00000417137 TRAV9-2A0A087WT02 112 aa15.8■□□□□ 0.12
SMARCB1-205ENST00000417137 RIGQ13278 110 aa15.8■□□□□ 0.12
SMARCB1-205ENST00000417137 OR10J3Q5JRS4 329 aa15.8■□□□□ 0.12
SMARCB1-205ENST00000417137 COMMD7Q86VX2 200 aa15.8■□□□□ 0.12
SMARCB1-205ENST00000417137 NEXN-AS1Q8NBZ9 246 aa15.8■□□□□ 0.12
SMARCB1-205ENST00000417137 SMIM27A0A1W2PRY6 76 aa15.79■□□□□ 0.12
SMARCB1-205ENST00000417137 K7EP13 123 aa15.79■□□□□ 0.12
SMARCB1-205ENST00000417137 M0QY20 66 aa15.79■□□□□ 0.12
SMARCB1-205ENST00000417137 UBE2D3P61077 147 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms