RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 IGLC6P0CF74 106 aa12.37□□□□□ -0.43
SEMA3B-201ENST00000416295 C1orf134Q5TEV5 83 aa12.37□□□□□ -0.43
SEMA3B-201ENST00000416295 Q6ZSN1 163 aa12.37□□□□□ -0.43
SEMA3B-201ENST00000416295 SMIM7Q9BQ49 75 aa12.37□□□□□ -0.43
SEMA3B-201ENST00000416295 LY96Q9Y6Y9 160 aa12.37□□□□□ -0.43
SEMA3B-201ENST00000416295 DNAH6Q9C0G6 4158 aa12.36□□□□□ -0.43
SEMA3B-201ENST00000416295 A0A1W2PPQ1 181 aa12.36□□□□□ -0.43
SEMA3B-201ENST00000416295 GZMBP10144 247 aa12.36□□□□□ -0.43
SEMA3B-201ENST00000416295 TIRAPP58753 221 aa12.36□□□□□ -0.43
SEMA3B-201ENST00000416295 NUDT10Q8NFP7 164 aa12.36□□□□□ -0.43
SEMA3B-201ENST00000416295 NUDT11Q96G61 164 aa12.36□□□□□ -0.43
SEMA3B-201ENST00000416295 TPPP3Q9BW30 176 aa12.36□□□□□ -0.43
SEMA3B-201ENST00000416295 MUC21A0A0G2JKD1 596 aa12.35□□□□□ -0.43
SEMA3B-201ENST00000416295 MUC21A0A140T8X8 626 aa12.35□□□□□ -0.43
SEMA3B-201ENST00000416295 F2Z2F3 143 aa12.35□□□□□ -0.43
SEMA3B-201ENST00000416295 SRP19P09132 144 aaKnown RBP12.35□□□□□ -0.43
SEMA3B-201ENST00000416295 AP1S3Q96PC3 154 aa12.35□□□□□ -0.43
SEMA3B-201ENST00000416295 RNASE7Q9H1E1 156 aaKnown RBP12.35□□□□□ -0.43
SEMA3B-201ENST00000416295 RPP21Q9H633 154 aaKnown RBP12.35□□□□□ -0.43
SEMA3B-201ENST00000416295 ZNF727A8MUV8 499 aa12.34□□□□□ -0.43
SEMA3B-201ENST00000416295 CACNG7P62955 275 aa12.34□□□□□ -0.43
SEMA3B-201ENST00000416295 C14orf178Q8N769 122 aaPredicted RBP12.34□□□□□ -0.43
SEMA3B-201ENST00000416295 DNAH10Q8IVF4 4471 aa12.34□□□□□ -0.43
SEMA3B-201ENST00000416295 RTL8CO15255 209 aa12.33□□□□□ -0.44
SEMA3B-201ENST00000416295 SSTP61278 116 aa12.33□□□□□ -0.44
SEMA3B-201ENST00000416295 PEA15Q15121 130 aa12.33□□□□□ -0.44
SEMA3B-201ENST00000416295 C6orf223Q8N319 242 aa12.33□□□□□ -0.44
SEMA3B-201ENST00000416295 ATP6V0E2Q8NHE4 81 aa12.33□□□□□ -0.44
SEMA3B-201ENST00000416295 SMDT1Q9H4I9 107 aa12.33□□□□□ -0.44
SEMA3B-201ENST00000416295 TRBV10-1A0A0K0K1A3 114 aa12.32□□□□□ -0.44
SEMA3B-201ENST00000416295 GAGE12JA6NER3 117 aa12.32□□□□□ -0.44
SEMA3B-201ENST00000416295 SMIM17P0DL12 118 aa12.32□□□□□ -0.44
SEMA3B-201ENST00000416295 LINC00694P0DN24 101 aa12.32□□□□□ -0.44
SEMA3B-201ENST00000416295 RAB4BP61018 213 aa12.32□□□□□ -0.44
SEMA3B-201ENST00000416295 GAGE1Q13065 139 aa12.32□□□□□ -0.44
SEMA3B-201ENST00000416295 GAGE4Q13068 117 aa12.32□□□□□ -0.44
SEMA3B-201ENST00000416295 GAGE5Q13069 117 aa12.32□□□□□ -0.44
SEMA3B-201ENST00000416295 ZNF56Q15929 161 aa12.32□□□□□ -0.44
SEMA3B-201ENST00000416295 GAGE13Q4V321 117 aa12.32□□□□□ -0.44
SEMA3B-201ENST00000416295 FAM74A3Q4VXF1 159 aa12.32□□□□□ -0.44
SEMA3B-201ENST00000416295 FAM231DQ6ZW35 169 aa12.32□□□□□ -0.44
SEMA3B-201ENST00000416295 GTSF1LQ9H1H1 148 aa12.32□□□□□ -0.44
SEMA3B-201ENST00000416295 BTF3P20290 206 aaKnown RBP12.31□□□□□ -0.44
SEMA3B-201ENST00000416295 CTRLP40313 264 aa12.31□□□□□ -0.44
SEMA3B-201ENST00000416295 ERVFC1-1P60608 527 aa12.31□□□□□ -0.44
SEMA3B-201ENST00000416295 LINC01551Q86U37 167 aa12.31□□□□□ -0.44
SEMA3B-201ENST00000416295 KRTAP1-5Q9BYS1 174 aa12.31□□□□□ -0.44
SEMA3B-201ENST00000416295 TRAV9-2A0A087WT02 112 aa12.3□□□□□ -0.44
SEMA3B-201ENST00000416295 TRAV8-6A0A0B4J262 113 aa12.3□□□□□ -0.44
SEMA3B-201ENST00000416295 PRSS29PA6NIE9 313 aa12.3□□□□□ -0.44
SEMA3B-201ENST00000416295 K7EP13 123 aa12.3□□□□□ -0.44
SEMA3B-201ENST00000416295 GATCO43716 136 aaKnown RBP12.3□□□□□ -0.44
SEMA3B-201ENST00000416295 RAB14P61106 215 aa12.3□□□□□ -0.44
SEMA3B-201ENST00000416295 LYZL1Q6UWQ5 148 aa12.3□□□□□ -0.44
SEMA3B-201ENST00000416295 WFDC10BQ8IUB3 73 aa12.3□□□□□ -0.44
SEMA3B-201ENST00000416295 HECTD4Q9Y4D8 3996 aa12.3□□□□□ -0.44
SEMA3B-201ENST00000416295 TRGC1P0CF51 173 aa12.29□□□□□ -0.44
SEMA3B-201ENST00000416295 RPL36AP83881 106 aaKnown RBP12.29□□□□□ -0.44
SEMA3B-201ENST00000416295 CT83Q5H943 113 aa12.29□□□□□ -0.44
SEMA3B-201ENST00000416295 LELP1Q5T871 98 aa12.29□□□□□ -0.44
SEMA3B-201ENST00000416295 WDR73Q6P4I2 378 aa12.29□□□□□ -0.44
SEMA3B-201ENST00000416295 RPL36ALQ969Q0 106 aaKnown RBP12.29□□□□□ -0.44
SEMA3B-201ENST00000416295 Q9UF83 564 aa12.29□□□□□ -0.44
SEMA3B-201ENST00000416295 A8MWL6 223 aa12.28□□□□□ -0.44
SEMA3B-201ENST00000416295 F5H697 171 aa12.28□□□□□ -0.44
SEMA3B-201ENST00000416295 DNAH10OSP0CZ25 163 aa12.28□□□□□ -0.44
SEMA3B-201ENST00000416295 EVI2AP22794 236 aa12.28□□□□□ -0.44
SEMA3B-201ENST00000416295 OR10J3Q5JRS4 329 aa12.28□□□□□ -0.44
SEMA3B-201ENST00000416295 CNFNQ9BYD5 112 aa12.28□□□□□ -0.44
SEMA3B-201ENST00000416295 A0A087WWC5 75 aa12.27□□□□□ -0.45
SEMA3B-201ENST00000416295 C9JQL5 133 aa12.27□□□□□ -0.45
SEMA3B-201ENST00000416295 NTF3P20783 257 aa12.27□□□□□ -0.45
SEMA3B-201ENST00000416295 SRSF3P84103 164 aaKnown RBP12.27□□□□□ -0.45
SEMA3B-201ENST00000416295 TMEM241Q24JQ0 296 aa12.27□□□□□ -0.45
SEMA3B-201ENST00000416295 MSRB1Q9NZV6 116 aa12.27□□□□□ -0.45
SEMA3B-201ENST00000416295 KIF25-AS1Q9Y6Z4 181 aa12.27□□□□□ -0.45
SEMA3B-201ENST00000416295 TRBV7-3A0A075B6L6 115 aa12.26□□□□□ -0.45
SEMA3B-201ENST00000416295 IGHV3-38A0A0C4DH36 116 aa12.26□□□□□ -0.45
SEMA3B-201ENST00000416295 OR10G8Q8NGN5 311 aa12.26□□□□□ -0.45
SEMA3B-201ENST00000416295 GTSF1Q8WW33 167 aa12.26□□□□□ -0.45
SEMA3B-201ENST00000416295 OSTCQ9NRP0 149 aa12.26□□□□□ -0.45
SEMA3B-201ENST00000416295 MGPP08493 103 aa12.25□□□□□ -0.45
SEMA3B-201ENST00000416295 TWIST1Q15672 202 aa12.25□□□□□ -0.45
SEMA3B-201ENST00000416295 C10orf126Q8N4M7 172 aa12.25□□□□□ -0.45
SEMA3B-201ENST00000416295 C15orf54Q8N8G6 183 aa12.25□□□□□ -0.45
SEMA3B-201ENST00000416295 NAT8Q9UHE5 227 aa12.25□□□□□ -0.45
SEMA3B-201ENST00000416295 H7C1H1 209 aa12.24□□□□□ -0.45
SEMA3B-201ENST00000416295 LINC00315P59091 139 aa12.24□□□□□ -0.45
SEMA3B-201ENST00000416295 UBE2D3P61077 147 aa12.24□□□□□ -0.45
SEMA3B-201ENST00000416295 UBE2D2P62837 147 aa12.24□□□□□ -0.45
SEMA3B-201ENST00000416295 LINC01556Q5JQF7 62 aa12.24□□□□□ -0.45
SEMA3B-201ENST00000416295 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.24□□□□□ -0.45
SEMA3B-201ENST00000416295 NEXN-AS1Q8NBZ9 246 aa12.24□□□□□ -0.45
SEMA3B-201ENST00000416295 ISOC2Q96AB3 205 aa12.24□□□□□ -0.45
SEMA3B-201ENST00000416295 DPH3P1Q9H4G8 78 aa12.24□□□□□ -0.45
SEMA3B-201ENST00000416295 RPL23P62829 140 aaKnown RBP12.23□□□□□ -0.45
SEMA3B-201ENST00000416295 ADIRFQ15847 76 aa12.23□□□□□ -0.45
SEMA3B-201ENST00000416295 TSKUQ8WUA8 353 aa12.23□□□□□ -0.45
SEMA3B-201ENST00000416295 GFRA4Q9GZZ7 299 aa12.23□□□□□ -0.45
SEMA3B-201ENST00000416295 FAM231BA6NCW3 169 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms