RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 PRAC2D3DTV9 90 aa9.12□□□□□ -0.95
PTPRF-205ENST00000414879 IFITM1P13164 125 aa9.12□□□□□ -0.95
PTPRF-205ENST00000414879 GATD1Q8NB37 220 aa9.12□□□□□ -0.95
PTPRF-205ENST00000414879 TRBV7-3A0A075B6L6 115 aa9.12□□□□□ -0.95
PTPRF-205ENST00000414879 PRSS29PA6NIE9 313 aa9.12□□□□□ -0.95
PTPRF-205ENST00000414879 PLA2G2AP14555 144 aa9.12□□□□□ -0.95
PTPRF-205ENST00000414879 NOTCH3Q9UM47 2321 aa9.12□□□□□ -0.95
PTPRF-205ENST00000414879 ZNF295-AS1Q8N0V1 137 aa9.12□□□□□ -0.95
PTPRF-205ENST00000414879 IGHV3-38A0A0C4DH36 116 aa9.12□□□□□ -0.95
PTPRF-205ENST00000414879 BRI3O95415 125 aa9.12□□□□□ -0.95
PTPRF-205ENST00000414879 SLC25A29Q8N8R3 303 aa9.12□□□□□ -0.95
PTPRF-205ENST00000414879 NKAPP1Q8N9T2 125 aa9.12□□□□□ -0.95
PTPRF-205ENST00000414879 C11orf68Q9H3H3 251 aaKnown RBP9.12□□□□□ -0.95
PTPRF-205ENST00000414879 TNRC6AQ8NDV7 1962 aaKnown RBP9.12□□□□□ -0.95
PTPRF-205ENST00000414879 TRAV4A0A0B4J268 109 aa9.11□□□□□ -0.95
PTPRF-205ENST00000414879 C21orf62-AS1Q17RA5 79 aa9.11□□□□□ -0.95
PTPRF-205ENST00000414879 PRR31Q5SQ13 230 aa9.11□□□□□ -0.95
PTPRF-205ENST00000414879 TRAV8-4A0A0B4J246 113 aa9.11□□□□□ -0.95
PTPRF-205ENST00000414879 ZFP2Q6ZN57 461 aa9.11□□□□□ -0.95
PTPRF-205ENST00000414879 DEFB114Q30KQ6 69 aa9.11□□□□□ -0.95
PTPRF-205ENST00000414879 C1orf229Q6ZS94 237 aaPredicted RBP9.11□□□□□ -0.95
PTPRF-205ENST00000414879 ZFAND3Q9H8U3 227 aa9.11□□□□□ -0.95
PTPRF-205ENST00000414879 Q6ZSV7 163 aa9.11□□□□□ -0.95
PTPRF-205ENST00000414879 INAFM2P0DMQ5 153 aa9.1□□□□□ -0.95
PTPRF-205ENST00000414879 GYPEP15421 78 aa9.1□□□□□ -0.95
PTPRF-205ENST00000414879 PSMB8P28062 276 aa9.1□□□□□ -0.95
PTPRF-205ENST00000414879 GTSF1Q8WW33 167 aa9.1□□□□□ -0.95
PTPRF-205ENST00000414879 C1orf43Q9BWL3 253 aa9.1□□□□□ -0.95
PTPRF-205ENST00000414879 HILS1P60008 231 aa9.1□□□□□ -0.95
PTPRF-205ENST00000414879 C2orf82Q6UX34 121 aa9.1□□□□□ -0.95
PTPRF-205ENST00000414879 VWC2LB2RUY7 222 aa9.1□□□□□ -0.95
PTPRF-205ENST00000414879 MLST8Q9BVC4 326 aa9.1□□□□□ -0.95
PTPRF-205ENST00000414879 CEP350Q5VT06 3117 aa9.09□□□□□ -0.95
PTPRF-205ENST00000414879 NCOR2Q9Y618 2525 aa9.09□□□□□ -0.95
PTPRF-205ENST00000414879 LYRM9A8MSI8 78 aa9.09□□□□□ -0.95
PTPRF-205ENST00000414879 TRBV12-3P01733 135 aa9.09□□□□□ -0.95
PTPRF-205ENST00000414879 CRIP2P52943 208 aaPredicted RBP9.09□□□□□ -0.95
PTPRF-205ENST00000414879 SPANXDQ9BXN6 97 aa9.09□□□□□ -0.95
PTPRF-205ENST00000414879 ATRXP46100 2492 aa9.09□□□□□ -0.95
PTPRF-205ENST00000414879 IGLL1P15814 213 aa9.09□□□□□ -0.95
PTPRF-205ENST00000414879 CXCL5P42830 114 aa9.09□□□□□ -0.95
PTPRF-205ENST00000414879 PRO0255Q9UI72 69 aa9.09□□□□□ -0.95
PTPRF-205ENST00000414879 NDUFA7O95182 113 aa9.08□□□□□ -0.96
PTPRF-205ENST00000414879 HHLA3Q9XRX5 114 aa9.08□□□□□ -0.96
PTPRF-205ENST00000414879 NOTCH2Q04721 2471 aa9.08□□□□□ -0.96
PTPRF-205ENST00000414879 TM2D2Q9BX73 214 aa9.08□□□□□ -0.96
PTPRF-205ENST00000414879 KLK5Q9Y337 293 aaPredicted RBP9.08□□□□□ -0.96
PTPRF-205ENST00000414879 H3BMM0 161 aa9.08□□□□□ -0.96
PTPRF-205ENST00000414879 CCL25O15444 150 aa9.08□□□□□ -0.96
PTPRF-205ENST00000414879 IGLV1-40P01703 118 aa9.08□□□□□ -0.96
PTPRF-205ENST00000414879 UBE2V1Q13404 147 aa9.08□□□□□ -0.96
PTPRF-205ENST00000414879 LAMTOR3Q9UHA4 124 aa9.08□□□□□ -0.96
PTPRF-205ENST00000414879 PRO1854Q9UHT4 67 aa9.08□□□□□ -0.96
PTPRF-205ENST00000414879 CHD9Q3L8U1 2897 aa9.08□□□□□ -0.96
PTPRF-205ENST00000414879 DLEU1O43261 78 aa9.07□□□□□ -0.96
PTPRF-205ENST00000414879 DEFB104AQ8WTQ1 72 aa9.07□□□□□ -0.96
PTPRF-205ENST00000414879 TOMM6Q96B49 74 aa9.07□□□□□ -0.96
PTPRF-205ENST00000414879 ZNF702PQ9H963 129 aa9.07□□□□□ -0.96
PTPRF-205ENST00000414879 PCNTO95613 3336 aa9.07□□□□□ -0.96
PTPRF-205ENST00000414879 EXPH5Q8NEV8 1989 aa9.07□□□□□ -0.96
PTPRF-205ENST00000414879 LINC01548A6NM66 108 aa9.07□□□□□ -0.96
PTPRF-205ENST00000414879 NAV3Q8IVL0 2385 aa9.07□□□□□ -0.96
PTPRF-205ENST00000414879 UTF1Q5T230 341 aa9.07□□□□□ -0.96
PTPRF-205ENST00000414879 COX11Q9Y6N1 276 aa9.07□□□□□ -0.96
PTPRF-205ENST00000414879 NAV2Q8IVL1 2488 aa9.06□□□□□ -0.96
PTPRF-205ENST00000414879 A0A1B0GXF2 115 aa9.06□□□□□ -0.96
PTPRF-205ENST00000414879 H3BQ85 93 aa9.06□□□□□ -0.96
PTPRF-205ENST00000414879 H7C423 109 aa9.06□□□□□ -0.96
PTPRF-205ENST00000414879 CRLF1O75462 422 aa9.06□□□□□ -0.96
PTPRF-205ENST00000414879 IGLC6P0CF74 106 aa9.06□□□□□ -0.96
PTPRF-205ENST00000414879 CRYBA4P53673 196 aa9.06□□□□□ -0.96
PTPRF-205ENST00000414879 CEND1Q8N111 149 aa9.06□□□□□ -0.96
PTPRF-205ENST00000414879 C9orf118A6NHY6 69 aa9.06□□□□□ -0.96
PTPRF-205ENST00000414879 NPC2P61916 151 aa9.06□□□□□ -0.96
PTPRF-205ENST00000414879 TRANK1O15050 2925 aa9.06□□□□□ -0.96
PTPRF-205ENST00000414879 ASPHD1Q5U4P2 390 aa9.05□□□□□ -0.96
PTPRF-205ENST00000414879 RPL39LQ96EH5 51 aaKnown RBP9.05□□□□□ -0.96
PTPRF-205ENST00000414879 BRCA2P51587 3418 aa9.05□□□□□ -0.96
PTPRF-205ENST00000414879 A0A1B0GV72 72 aa9.05□□□□□ -0.96
PTPRF-205ENST00000414879 MSRB1Q9NZV6 116 aa9.05□□□□□ -0.96
PTPRF-205ENST00000414879 A0A0J9YY99 117 aa9.05□□□□□ -0.96
PTPRF-205ENST00000414879 COX7A2LO14548 114 aa9.05□□□□□ -0.96
PTPRF-205ENST00000414879 PFN2P35080 140 aa9.05□□□□□ -0.96
PTPRF-205ENST00000414879 SPRY2O43597 315 aa9.05□□□□□ -0.96
PTPRF-205ENST00000414879 DKK2Q9UBU2 259 aa9.05□□□□□ -0.96
PTPRF-205ENST00000414879 IGLV2-8P01709 118 aa9.04□□□□□ -0.96
PTPRF-205ENST00000414879 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.04□□□□□ -0.96
PTPRF-205ENST00000414879 IGKV2-29A2NJV5 120 aaPredicted RBP9.04□□□□□ -0.96
PTPRF-205ENST00000414879 IGF2RP11717 2491 aa9.04□□□□□ -0.96
PTPRF-205ENST00000414879 LY6G6DO95868 133 aa9.04□□□□□ -0.96
PTPRF-205ENST00000414879 IGKV2D-24A0A075B6R9 120 aa9.03□□□□□ -0.96
PTPRF-205ENST00000414879 FGF6P10767 208 aa9.03□□□□□ -0.96
PTPRF-205ENST00000414879 PIK3CD-AS1Q5SR53 167 aa9.03□□□□□ -0.96
PTPRF-205ENST00000414879 ZNF625Q96I27 306 aaPredicted RBP9.03□□□□□ -0.96
PTPRF-205ENST00000414879 MIFP14174 115 aa9.03□□□□□ -0.96
PTPRF-205ENST00000414879 SPATA12Q7Z6I5 190 aa9.03□□□□□ -0.96
PTPRF-205ENST00000414879 C20orf203Q8NBC4 194 aa9.03□□□□□ -0.96
PTPRF-205ENST00000414879 UBE2WQ96B02 151 aa9.03□□□□□ -0.96
PTPRF-205ENST00000414879 HIGD1BQ9P298 99 aa9.03□□□□□ -0.96
PTPRF-205ENST00000414879 INAFM1C9JVW0 142 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms