RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 GRIFINA4D1Z8 144 aa9.52□□□□□ -0.89
RAPGEF1-204ENST00000414781 SNURFLB1AK76 121 aa9.52□□□□□ -0.89
RAPGEF1-204ENST00000414781 SERTAD4-AS1Q5TG53 156 aa9.52□□□□□ -0.89
RAPGEF1-204ENST00000414781 FER1L6-AS1Q8NA97 138 aa9.52□□□□□ -0.89
RAPGEF1-204ENST00000414781 NBDYA0A0U1RRE5 68 aa9.51□□□□□ -0.89
RAPGEF1-204ENST00000414781 SMIM27A0A1W2PRY6 76 aa9.51□□□□□ -0.89
RAPGEF1-204ENST00000414781 OR5AL1P0C617 328 aa9.51□□□□□ -0.89
RAPGEF1-204ENST00000414781 ARMS2P0C7Q2 107 aa9.51□□□□□ -0.89
RAPGEF1-204ENST00000414781 WDR73Q6P4I2 378 aa9.51□□□□□ -0.89
RAPGEF1-204ENST00000414781 SYT8Q8NBV8 401 aa9.51□□□□□ -0.89
RAPGEF1-204ENST00000414781 RNASE8Q8TDE3 154 aaKnown RBP9.51□□□□□ -0.89
RAPGEF1-204ENST00000414781 BTF3L4Q96K17 158 aa9.51□□□□□ -0.89
RAPGEF1-204ENST00000414781 SSBP4Q9BWG4 385 aaPredicted RBP9.51□□□□□ -0.89
RAPGEF1-204ENST00000414781 PHLDA3Q9Y5J5 127 aa9.51□□□□□ -0.89
RAPGEF1-204ENST00000414781 TCL1AP56279 114 aa9.5□□□□□ -0.89
RAPGEF1-204ENST00000414781 CACNG7P62955 275 aa9.5□□□□□ -0.89
RAPGEF1-204ENST00000414781 MDFICQ9P1T7 246 aa9.5□□□□□ -0.89
RAPGEF1-204ENST00000414781 TIMM8BQ9Y5J9 83 aaPredicted RBP9.5□□□□□ -0.89
RAPGEF1-204ENST00000414781 TRAV9-1A0A075B6T8 112 aa9.49□□□□□ -0.89
RAPGEF1-204ENST00000414781 HIGD1CA8MV81 97 aa9.49□□□□□ -0.89
RAPGEF1-204ENST00000414781 SNAI2O43623 268 aa9.49□□□□□ -0.89
RAPGEF1-204ENST00000414781 IGLC6P0CF74 106 aa9.49□□□□□ -0.89
RAPGEF1-204ENST00000414781 GZMBP10144 247 aa9.49□□□□□ -0.89
RAPGEF1-204ENST00000414781 AZU1P20160 251 aa9.49□□□□□ -0.89
RAPGEF1-204ENST00000414781 DAZ2Q13117 558 aaKnown RBP9.49□□□□□ -0.89
RAPGEF1-204ENST00000414781 PIK3CD-AS1Q5SR53 167 aa9.49□□□□□ -0.89
RAPGEF1-204ENST00000414781 GTSF1Q8WW33 167 aa9.49□□□□□ -0.89
RAPGEF1-204ENST00000414781 PTH2Q96A98 100 aa9.49□□□□□ -0.89
RAPGEF1-204ENST00000414781 C9orf85Q96MD7 179 aa9.49□□□□□ -0.89
RAPGEF1-204ENST00000414781 TPPP3Q9BW30 176 aa9.49□□□□□ -0.89
RAPGEF1-204ENST00000414781 GSN-AS1Q9NRJ2 163 aa9.49□□□□□ -0.89
RAPGEF1-204ENST00000414781 SMCO4Q9NRQ5 59 aa9.49□□□□□ -0.89
RAPGEF1-204ENST00000414781 TEX48A0A1B0GUV7 120 aa9.48□□□□□ -0.89
RAPGEF1-204ENST00000414781 H3BVH4 76 aa9.48□□□□□ -0.89
RAPGEF1-204ENST00000414781 M0R2P5 195 aa9.48□□□□□ -0.89
RAPGEF1-204ENST00000414781 RNASE3P12724 160 aaKnown RBP9.48□□□□□ -0.89
RAPGEF1-204ENST00000414781 CTRLP40313 264 aa9.48□□□□□ -0.89
RAPGEF1-204ENST00000414781 KRTAP10-2P60368 255 aa9.48□□□□□ -0.89
RAPGEF1-204ENST00000414781 RIGQ13278 110 aa9.48□□□□□ -0.89
RAPGEF1-204ENST00000414781 SPANXN1Q5VSR9 72 aa9.48□□□□□ -0.89
RAPGEF1-204ENST00000414781 LYZL1Q6UWQ5 148 aa9.48□□□□□ -0.89
RAPGEF1-204ENST00000414781 ZFP82Q8N141 532 aa9.48□□□□□ -0.89
RAPGEF1-204ENST00000414781 C11orf72Q8NBR9 251 aa9.48□□□□□ -0.89
RAPGEF1-204ENST00000414781 A0A1B0GUT8 65 aa9.47□□□□□ -0.89
RAPGEF1-204ENST00000414781 A0A1B0GW15 77 aa9.47□□□□□ -0.89
RAPGEF1-204ENST00000414781 PRM2P04554 102 aa9.47□□□□□ -0.89
RAPGEF1-204ENST00000414781 S100A8P05109 93 aa9.47□□□□□ -0.89
RAPGEF1-204ENST00000414781 BTF3P20290 206 aaKnown RBP9.47□□□□□ -0.89
RAPGEF1-204ENST00000414781 NUP35Q8NFH5 326 aa9.47□□□□□ -0.89
RAPGEF1-204ENST00000414781 PGLYRP4Q96LB8 373 aa9.47□□□□□ -0.89
RAPGEF1-204ENST00000414781 LYRM9A8MSI8 78 aa9.46□□□□□ -0.9
RAPGEF1-204ENST00000414781 SPART-AS1P0CW21 52 aa9.46□□□□□ -0.9
RAPGEF1-204ENST00000414781 EMP1P54849 157 aa9.46□□□□□ -0.9
RAPGEF1-204ENST00000414781 ZNF876PQ49A33 203 aa9.46□□□□□ -0.9
RAPGEF1-204ENST00000414781 ATRAIDQ6UW56 229 aa9.46□□□□□ -0.9
RAPGEF1-204ENST00000414781 SMIM15Q7Z3B0 74 aa9.46□□□□□ -0.9
RAPGEF1-204ENST00000414781 ATP5L2Q7Z4Y8 100 aa9.46□□□□□ -0.9
RAPGEF1-204ENST00000414781 CNFNQ9BYD5 112 aa9.46□□□□□ -0.9
RAPGEF1-204ENST00000414781 TWIST1Q15672 202 aa9.45□□□□□ -0.9
RAPGEF1-204ENST00000414781 RASL10AQ92737 203 aa9.45□□□□□ -0.9
RAPGEF1-204ENST00000414781 NOP10Q9NPE3 64 aaKnown RBP9.45□□□□□ -0.9
RAPGEF1-204ENST00000414781 NACAE9PAV3 2078 aa9.44□□□□□ -0.9
RAPGEF1-204ENST00000414781 PLAC8L1A1L4L8 177 aa9.44□□□□□ -0.9
RAPGEF1-204ENST00000414781 M0R381 172 aa9.44□□□□□ -0.9
RAPGEF1-204ENST00000414781 CIDEAO60543 219 aa9.44□□□□□ -0.9
RAPGEF1-204ENST00000414781 SPINK4O60575 86 aa9.44□□□□□ -0.9
RAPGEF1-204ENST00000414781 TRGC1P0CF51 173 aa9.44□□□□□ -0.9
RAPGEF1-204ENST00000414781 NTF3P20783 257 aa9.44□□□□□ -0.9
RAPGEF1-204ENST00000414781 COX19Q49B96 90 aa9.44□□□□□ -0.9
RAPGEF1-204ENST00000414781 RASL11AQ6T310 242 aa9.44□□□□□ -0.9
RAPGEF1-204ENST00000414781 C15orf53Q8NAA6 179 aa9.44□□□□□ -0.9
RAPGEF1-204ENST00000414781 OR10AG1Q8NH19 301 aa9.44□□□□□ -0.9
RAPGEF1-204ENST00000414781 URGCP-MRPS24S4R325 110 aa9.44□□□□□ -0.9
RAPGEF1-204ENST00000414781 TRGV1A0A0A0MS02 117 aa9.43□□□□□ -0.9
RAPGEF1-204ENST00000414781 A8MWV9 139 aa9.43□□□□□ -0.9
RAPGEF1-204ENST00000414781 NXPH4O95158 308 aa9.43□□□□□ -0.9
RAPGEF1-204ENST00000414781 XGP55808 180 aa9.43□□□□□ -0.9
RAPGEF1-204ENST00000414781 DMRTA1Q5VZB9 504 aa9.43□□□□□ -0.9
RAPGEF1-204ENST00000414781 ZNRF2Q8NHG8 242 aa9.43□□□□□ -0.9
RAPGEF1-204ENST00000414781 TRBV24-1A0A075B6N3 115 aa9.42□□□□□ -0.9
RAPGEF1-204ENST00000414781 TRGV2A0A075B6R0 118 aa9.42□□□□□ -0.9
RAPGEF1-204ENST00000414781 FAM229AH3BQW9 127 aa9.42□□□□□ -0.9
RAPGEF1-204ENST00000414781 SMIM17P0DL12 118 aa9.42□□□□□ -0.9
RAPGEF1-204ENST00000414781 SSTP61278 116 aa9.42□□□□□ -0.9
RAPGEF1-204ENST00000414781 HBBP68871 147 aa9.42□□□□□ -0.9
RAPGEF1-204ENST00000414781 FAM222AQ5U5X8 452 aa9.42□□□□□ -0.9
RAPGEF1-204ENST00000414781 Q6ZSN1 163 aa9.42□□□□□ -0.9
RAPGEF1-204ENST00000414781 AP1S3Q96PC3 154 aa9.42□□□□□ -0.9
RAPGEF1-204ENST00000414781 DKK2Q9UBU2 259 aa9.42□□□□□ -0.9
RAPGEF1-204ENST00000414781 MUC21A0A0G2JKD1 596 aa9.41□□□□□ -0.9
RAPGEF1-204ENST00000414781 MUC21A0A140T8X8 626 aa9.41□□□□□ -0.9
RAPGEF1-204ENST00000414781 ELOBQ15370 118 aa9.41□□□□□ -0.9
RAPGEF1-204ENST00000414781 TMEM88Q6PEY1 159 aa9.41□□□□□ -0.9
RAPGEF1-204ENST00000414781 MRPL16Q9NX20 251 aaKnown RBP9.41□□□□□ -0.9
RAPGEF1-204ENST00000414781 GAGE12BA1L429 117 aa9.4□□□□□ -0.9
RAPGEF1-204ENST00000414781 KRTAP29-1A8MX34 341 aaPredicted RBP9.4□□□□□ -0.9
RAPGEF1-204ENST00000414781 RHODO00212 210 aa9.4□□□□□ -0.9
RAPGEF1-204ENST00000414781 GAGE7O76087 117 aa9.4□□□□□ -0.9
RAPGEF1-204ENST00000414781 GAGE12FP0CL80 117 aa9.4□□□□□ -0.9
RAPGEF1-204ENST00000414781 GAGE12GP0CL81 117 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms