RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 DOCK1Q14185 1865 aa1.5□□□□□ -2.17
HMGB3P31-201ENST00000413333 MUC22E2RYF6 1773 aaPredicted RBP1.49□□□□□ -2.17
HMGB3P31-201ENST00000413333 TRANK1O15050 2925 aa1.49□□□□□ -2.17
HMGB3P31-201ENST00000413333 CC2D2AQ9P2K1 1620 aa1.49□□□□□ -2.17
HMGB3P31-201ENST00000413333 TRAV2A0A0B4J234 112 aa1.49□□□□□ -2.17
HMGB3P31-201ENST00000413333 OOSP1A8MZH6 123 aa1.49□□□□□ -2.17
HMGB3P31-201ENST00000413333 SPINK8P0C7L1 97 aa1.49□□□□□ -2.17
HMGB3P31-201ENST00000413333 KRTAP10-4P60372 401 aaPredicted RBP1.49□□□□□ -2.17
HMGB3P31-201ENST00000413333 C5orf17Q8NAS9 161 aa1.49□□□□□ -2.17
HMGB3P31-201ENST00000413333 DYNLRB2Q8TF09 96 aa1.49□□□□□ -2.17
HMGB3P31-201ENST00000413333 SNHG12Q9BXW3 62 aa1.49□□□□□ -2.17
HMGB3P31-201ENST00000413333 MYO18AQ92614 2054 aaKnown RBP1.49□□□□□ -2.17
HMGB3P31-201ENST00000413333 ADGRL2O95490 1459 aa1.49□□□□□ -2.17
HMGB3P31-201ENST00000413333 PTPRMP28827 1452 aa1.49□□□□□ -2.17
HMGB3P31-201ENST00000413333 ABCA3Q99758 1704 aa1.49□□□□□ -2.17
HMGB3P31-201ENST00000413333 MYH8P13535 1937 aa1.48□□□□□ -2.17
HMGB3P31-201ENST00000413333 PTPRDP23468 1912 aa1.48□□□□□ -2.17
HMGB3P31-201ENST00000413333 SHROOM2Q13796 1616 aa1.48□□□□□ -2.17
HMGB3P31-201ENST00000413333 OTOGLQ3ZCN5 2332 aa1.48□□□□□ -2.17
HMGB3P31-201ENST00000413333 MPC2O95563 127 aa1.48□□□□□ -2.17
HMGB3P31-201ENST00000413333 IFITM1P13164 125 aa1.48□□□□□ -2.17
HMGB3P31-201ENST00000413333 C9orf153Q5TBE3 101 aa1.48□□□□□ -2.17
HMGB3P31-201ENST00000413333 TTC9CQ8N5M4 171 aa1.48□□□□□ -2.17
HMGB3P31-201ENST00000413333 OR10AG1Q8NH19 301 aa1.48□□□□□ -2.17
HMGB3P31-201ENST00000413333 SPTSSAQ969W0 71 aa1.48□□□□□ -2.17
HMGB3P31-201ENST00000413333 TMEM242Q9NWH2 141 aa1.48□□□□□ -2.17
HMGB3P31-201ENST00000413333 E9PCH4 1651 aa1.48□□□□□ -2.17
HMGB3P31-201ENST00000413333 ZGRF1Q86YA3 2104 aa1.48□□□□□ -2.17
HMGB3P31-201ENST00000413333 SPAG17Q6Q759 2223 aa1.47□□□□□ -2.17
HMGB3P31-201ENST00000413333 NDUFB6O95139 128 aa1.47□□□□□ -2.17
HMGB3P31-201ENST00000413333 PPYP01298 95 aa1.47□□□□□ -2.17
HMGB3P31-201ENST00000413333 IGHV3-33P01772 117 aa1.47□□□□□ -2.17
HMGB3P31-201ENST00000413333 IL5P05113 134 aa1.47□□□□□ -2.17
HMGB3P31-201ENST00000413333 GYPBP06028 91 aa1.47□□□□□ -2.17
HMGB3P31-201ENST00000413333 PIRTP0C851 137 aa1.47□□□□□ -2.17
HMGB3P31-201ENST00000413333 S100A10P60903 97 aa1.47□□□□□ -2.17
HMGB3P31-201ENST00000413333 COL5A1-AS1Q5SY13 56 aa1.47□□□□□ -2.17
HMGB3P31-201ENST00000413333 WFDC10AQ9H1F0 79 aa1.47□□□□□ -2.17
HMGB3P31-201ENST00000413333 PATJQ8NI35 1801 aa1.47□□□□□ -2.17
HMGB3P31-201ENST00000413333 RBBP6Q7Z6E9 1792 aaKnown RBP1.47□□□□□ -2.17
HMGB3P31-201ENST00000413333 ARHGAP5Q13017 1502 aa1.46□□□□□ -2.18
HMGB3P31-201ENST00000413333 NPC2P61916 151 aa1.46□□□□□ -2.18
HMGB3P31-201ENST00000413333 SPANXN1Q5VSR9 72 aa1.46□□□□□ -2.18
HMGB3P31-201ENST00000413333 C12orf73Q69YU5 71 aa1.46□□□□□ -2.18
HMGB3P31-201ENST00000413333 SVBPQ8N300 66 aa1.46□□□□□ -2.18
HMGB3P31-201ENST00000413333 Q8N8P6 123 aa1.46□□□□□ -2.18
HMGB3P31-201ENST00000413333 DSCR8Q96T75 97 aa1.46□□□□□ -2.18
HMGB3P31-201ENST00000413333 NDUFA12Q9UI09 145 aa1.46□□□□□ -2.18
HMGB3P31-201ENST00000413333 DAPK1P53355 1430 aa1.46□□□□□ -2.18
HMGB3P31-201ENST00000413333 ABCA4P78363 2273 aa1.45□□□□□ -2.18
HMGB3P31-201ENST00000413333 IGLV3-32A0A0A0MS00 114 aa1.45□□□□□ -2.18
HMGB3P31-201ENST00000413333 A0A1W2PRS3 328 aa1.45□□□□□ -2.18
HMGB3P31-201ENST00000413333 TMEM262E9PQX1 116 aa1.45□□□□□ -2.18
HMGB3P31-201ENST00000413333 PIPP12273 146 aaPredicted RBP1.45□□□□□ -2.18
HMGB3P31-201ENST00000413333 PPDPFLQ8WWR9 84 aa1.45□□□□□ -2.18
HMGB3P31-201ENST00000413333 AQP10Q96PS8 301 aa1.45□□□□□ -2.18
HMGB3P31-201ENST00000413333 PEAK1Q9H792 1746 aa1.45□□□□□ -2.18
HMGB3P31-201ENST00000413333 ZNF142P52746 1687 aaPredicted RBP1.45□□□□□ -2.18
HMGB3P31-201ENST00000413333 TOPAZ1Q8N9V7 1692 aa1.45□□□□□ -2.18
HMGB3P31-201ENST00000413333 MED14O60244 1454 aa1.44□□□□□ -2.18
HMGB3P31-201ENST00000413333 TEX14Q8IWB6 1497 aa1.44□□□□□ -2.18
HMGB3P31-201ENST00000413333 HELZ2Q9BYK8 2649 aaKnown RBP1.44□□□□□ -2.18
HMGB3P31-201ENST00000413333 CHD1O14646 1710 aa1.44□□□□□ -2.18
HMGB3P31-201ENST00000413333 PPIP5K1Q6PFW1 1433 aa1.44□□□□□ -2.18
HMGB3P31-201ENST00000413333 CASKIN1Q8WXD9 1431 aa1.44□□□□□ -2.18
HMGB3P31-201ENST00000413333 TRAV23DV6A0A075B6W5 121 aa1.44□□□□□ -2.18
HMGB3P31-201ENST00000413333 CXorf51AA0A1B0GTR3 108 aa1.44□□□□□ -2.18
HMGB3P31-201ENST00000413333 TCRBV3S1A0A5B6 114 aa1.44□□□□□ -2.18
HMGB3P31-201ENST00000413333 JMJD7-PLA2G4BH0Y9G9 81 aa1.44□□□□□ -2.18
HMGB3P31-201ENST00000413333 SNCGO76070 127 aa1.44□□□□□ -2.18
HMGB3P31-201ENST00000413333 INSL4Q14641 139 aa1.44□□□□□ -2.18
HMGB3P31-201ENST00000413333 ESPL1Q14674 2120 aa1.44□□□□□ -2.18
HMGB3P31-201ENST00000413333 RHOHQ15669 191 aa1.44□□□□□ -2.18
HMGB3P31-201ENST00000413333 C9orf62Q8N4C0 152 aa1.44□□□□□ -2.18
HMGB3P31-201ENST00000413333 TSKUQ8WUA8 353 aa1.44□□□□□ -2.18
HMGB3P31-201ENST00000413333 TMEM141Q96I45 108 aa1.44□□□□□ -2.18
HMGB3P31-201ENST00000413333 CTTNBP2Q8WZ74 1663 aa1.44□□□□□ -2.18
HMGB3P31-201ENST00000413333 NWD2Q9ULI1 1742 aa1.43□□□□□ -2.18
HMGB3P31-201ENST00000413333 CPSF1Q10570 1443 aaKnown RBP1.43□□□□□ -2.18
HMGB3P31-201ENST00000413333 C10orf71Q711Q0 1435 aa1.43□□□□□ -2.18
HMGB3P31-201ENST00000413333 KDM5AP29375 1690 aaKnown RBP1.43□□□□□ -2.18
HMGB3P31-201ENST00000413333 TCHHQ07283 1943 aa1.43□□□□□ -2.18
HMGB3P31-201ENST00000413333 TRAV17A0A0B4J275 112 aa1.43□□□□□ -2.18
HMGB3P31-201ENST00000413333 NCR3O14931 201 aa1.43□□□□□ -2.18
HMGB3P31-201ENST00000413333 SLC25A6P12236 298 aa1.43□□□□□ -2.18
HMGB3P31-201ENST00000413333 POLR2JP52435 117 aaKnown RBP1.43□□□□□ -2.18
HMGB3P31-201ENST00000413333 SLC48A1Q6P1K1 146 aa1.43□□□□□ -2.18
HMGB3P31-201ENST00000413333 SBSPONQ8IVN8 264 aa1.43□□□□□ -2.18
HMGB3P31-201ENST00000413333 AMELYQ99218 206 aa1.43□□□□□ -2.18
HMGB3P31-201ENST00000413333 TNS1Q9HBL0 1735 aaKnown RBP1.43□□□□□ -2.18
HMGB3P31-201ENST00000413333 FYCO1Q9BQS8 1478 aa1.43□□□□□ -2.18
HMGB3P31-201ENST00000413333 WNK3Q9BYP7 1800 aa1.43□□□□□ -2.18
HMGB3P31-201ENST00000413333 TET3O43151 1660 aa1.42□□□□□ -2.18
HMGB3P31-201ENST00000413333 USP24Q9UPU5 2620 aa1.42□□□□□ -2.18
HMGB3P31-201ENST00000413333 NSD3Q9BZ95 1437 aa1.42□□□□□ -2.18
HMGB3P31-201ENST00000413333 ROS1P08922 2347 aa1.42□□□□□ -2.18
HMGB3P31-201ENST00000413333 PHRF1Q9P1Y6 1649 aaKnown RBP1.42□□□□□ -2.18
HMGB3P31-201ENST00000413333 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.42□□□□□ -2.18
HMGB3P31-201ENST00000413333 A0A0J9YY99 117 aa1.42□□□□□ -2.18
HMGB3P31-201ENST00000413333 FAM24AA6NFZ4 105 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms