RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 TSKUQ8WUA8 353 aa2.15□□□□□ -2.07
BRCA1-204ENST00000412061 TMEM141Q96I45 108 aa2.15□□□□□ -2.07
BRCA1-204ENST00000412061 DSCR8Q96T75 97 aa2.15□□□□□ -2.07
BRCA1-204ENST00000412061 ZNF609O15014 1411 aa2.14□□□□□ -2.07
BRCA1-204ENST00000412061 PLXNC1O60486 1568 aa2.14□□□□□ -2.07
BRCA1-204ENST00000412061 PRDM2Q13029 1718 aa2.14□□□□□ -2.07
BRCA1-204ENST00000412061 ABCC2Q92887 1545 aa2.14□□□□□ -2.07
BRCA1-204ENST00000412061 ARHGEF12Q9NZN5 1544 aa2.14□□□□□ -2.07
BRCA1-204ENST00000412061 DNAL4O96015 105 aa2.14□□□□□ -2.07
BRCA1-204ENST00000412061 GYPBP06028 91 aa2.14□□□□□ -2.07
BRCA1-204ENST00000412061 GNG2P59768 71 aa2.14□□□□□ -2.07
BRCA1-204ENST00000412061 INSL4Q14641 139 aa2.14□□□□□ -2.07
BRCA1-204ENST00000412061 LINC00299Q6ZSB3 139 aa2.14□□□□□ -2.07
BRCA1-204ENST00000412061 Q8N8P6 123 aa2.14□□□□□ -2.07
BRCA1-204ENST00000412061 TMEM106BQ9NUM4 274 aa2.14□□□□□ -2.07
BRCA1-204ENST00000412061 MUC22E2RYF6 1773 aaPredicted RBP2.14□□□□□ -2.07
BRCA1-204ENST00000412061 KDM5DQ9BY66 1539 aa2.13□□□□□ -2.07
BRCA1-204ENST00000412061 CFAP43Q8NDM7 1665 aa2.13□□□□□ -2.07
BRCA1-204ENST00000412061 ROBO1Q9Y6N7 1651 aa2.13□□□□□ -2.07
BRCA1-204ENST00000412061 PTPRMP28827 1452 aa2.13□□□□□ -2.07
BRCA1-204ENST00000412061 BIVM-ERCC5R4GMW8 1640 aa2.13□□□□□ -2.07
BRCA1-204ENST00000412061 NUPR1O60356 82 aa2.13□□□□□ -2.07
BRCA1-204ENST00000412061 UBE2G1P62253 170 aa2.13□□□□□ -2.07
BRCA1-204ENST00000412061 E9PCH4 1651 aa2.12□□□□□ -2.07
BRCA1-204ENST00000412061 TTC37Q6PGP7 1564 aa2.12□□□□□ -2.07
BRCA1-204ENST00000412061 DAPK1P53355 1430 aa2.12□□□□□ -2.07
BRCA1-204ENST00000412061 TRGV2A0A075B6R0 118 aa2.12□□□□□ -2.07
BRCA1-204ENST00000412061 TCRBV3S1A0A5B6 114 aa2.12□□□□□ -2.07
BRCA1-204ENST00000412061 A6NIN4 97 aa2.12□□□□□ -2.07
BRCA1-204ENST00000412061 JMJD7-PLA2G4BH0Y9G9 81 aa2.12□□□□□ -2.07
BRCA1-204ENST00000412061 H3BQF6 201 aa2.12□□□□□ -2.07
BRCA1-204ENST00000412061 RBM3P98179 157 aaKnown RBP2.12□□□□□ -2.07
BRCA1-204ENST00000412061 MPV17LQ2QL34 196 aa2.12□□□□□ -2.07
BRCA1-204ENST00000412061 SPRNQ5BIV9 151 aa2.12□□□□□ -2.07
BRCA1-204ENST00000412061 TTC9CQ8N5M4 171 aa2.12□□□□□ -2.07
BRCA1-204ENST00000412061 EHBP1L1Q8N3D4 1523 aa2.12□□□□□ -2.07
BRCA1-204ENST00000412061 UGGT2Q9NYU1 1516 aa2.12□□□□□ -2.07
BRCA1-204ENST00000412061 SHROOM2Q13796 1616 aa2.11□□□□□ -2.07
BRCA1-204ENST00000412061 MYO18AQ92614 2054 aaKnown RBP2.11□□□□□ -2.07
BRCA1-204ENST00000412061 GCC2Q8IWJ2 1684 aa2.11□□□□□ -2.07
BRCA1-204ENST00000412061 LAMB1P07942 1786 aa2.11□□□□□ -2.07
BRCA1-204ENST00000412061 PRDM15P57071 1507 aaPredicted RBP2.11□□□□□ -2.07
BRCA1-204ENST00000412061 A0A0J9YY99 117 aa2.11□□□□□ -2.07
BRCA1-204ENST00000412061 CXorf51AA0A1B0GTR3 108 aa2.11□□□□□ -2.07
BRCA1-204ENST00000412061 NUPR2A6NF83 97 aa2.11□□□□□ -2.07
BRCA1-204ENST00000412061 FAM24AA6NFZ4 105 aa2.11□□□□□ -2.07
BRCA1-204ENST00000412061 MPC2O95563 127 aa2.11□□□□□ -2.07
BRCA1-204ENST00000412061 CBLN1P23435 193 aa2.11□□□□□ -2.07
BRCA1-204ENST00000412061 C9orf116Q5BN46 136 aaPredicted RBP2.11□□□□□ -2.07
BRCA1-204ENST00000412061 ATG5Q9H1Y0 275 aa2.11□□□□□ -2.07
BRCA1-204ENST00000412061 MRPL36Q9P0J6 103 aaKnown RBP2.11□□□□□ -2.07
BRCA1-204ENST00000412061 KIF14Q15058 1648 aa2.11□□□□□ -2.07
BRCA1-204ENST00000412061 SPHKAPQ2M3C7 1700 aa2.11□□□□□ -2.07
BRCA1-204ENST00000412061 ARFGEF3Q5TH69 2177 aa2.1□□□□□ -2.07
BRCA1-204ENST00000412061 ABCC5O15440 1437 aa2.1□□□□□ -2.07
BRCA1-204ENST00000412061 PPIP5K1Q6PFW1 1433 aa2.1□□□□□ -2.07
BRCA1-204ENST00000412061 ASXL1Q8IXJ9 1541 aa2.1□□□□□ -2.07
BRCA1-204ENST00000412061 EXPH5Q8NEV8 1989 aa2.1□□□□□ -2.07
BRCA1-204ENST00000412061 CLTCL1P53675 1640 aa2.1□□□□□ -2.07
BRCA1-204ENST00000412061 CC2D2AQ9P2K1 1620 aa2.1□□□□□ -2.07
BRCA1-204ENST00000412061 PIGBOS1A0A0B4J2F0 54 aa2.1□□□□□ -2.07
BRCA1-204ENST00000412061 TRBV10-1A0A0K0K1A3 114 aa2.1□□□□□ -2.07
BRCA1-204ENST00000412061 COL5A1-AS1Q5SY13 56 aa2.1□□□□□ -2.07
BRCA1-204ENST00000412061 SPTSSBQ8NFR3 76 aa2.1□□□□□ -2.07
BRCA1-204ENST00000412061 DMAC1Q96GE9 116 aa2.1□□□□□ -2.07
BRCA1-204ENST00000412061 AQP10Q96PS8 301 aa2.1□□□□□ -2.07
BRCA1-204ENST00000412061 SNHG12Q9BXW3 62 aa2.1□□□□□ -2.07
BRCA1-204ENST00000412061 WFDC10AQ9H1F0 79 aa2.1□□□□□ -2.07
BRCA1-204ENST00000412061 TMEM14CQ9P0S9 112 aa2.1□□□□□ -2.07
BRCA1-204ENST00000412061 CCDC141Q6ZP82 1450 aa2.1□□□□□ -2.07
BRCA1-204ENST00000412061 MAGI2Q86UL8 1455 aa2.1□□□□□ -2.07
BRCA1-204ENST00000412061 ABCA10Q8WWZ4 1543 aa2.09□□□□□ -2.07
BRCA1-204ENST00000412061 LAMC1P11047 1609 aa2.09□□□□□ -2.07
BRCA1-204ENST00000412061 ANKRD26Q9UPS8 1709 aa2.09□□□□□ -2.07
BRCA1-204ENST00000412061 TRAV23DV6A0A075B6W5 121 aa2.09□□□□□ -2.08
BRCA1-204ENST00000412061 IGLV3-1P01715 115 aa2.09□□□□□ -2.08
BRCA1-204ENST00000412061 ZNF625Q96I27 306 aaPredicted RBP2.09□□□□□ -2.08
BRCA1-204ENST00000412061 ODF3Q96PU9 254 aa2.09□□□□□ -2.08
BRCA1-204ENST00000412061 MRPL35Q9NZE8 188 aaKnown RBP2.09□□□□□ -2.08
BRCA1-204ENST00000412061 ADGRL2O95490 1459 aa2.09□□□□□ -2.08
BRCA1-204ENST00000412061 KIF21AQ7Z4S6 1674 aa2.09□□□□□ -2.08
BRCA1-204ENST00000412061 CASP8AP2Q9UKL3 1982 aa2.09□□□□□ -2.08
BRCA1-204ENST00000412061 TNRC6BQ9UPQ9 1833 aaKnown RBP2.08□□□□□ -2.08
BRCA1-204ENST00000412061 SUPT6HQ7KZ85 1726 aaKnown RBP2.08□□□□□ -2.08
BRCA1-204ENST00000412061 KDM6BO15054 1643 aa2.08□□□□□ -2.08
BRCA1-204ENST00000412061 CACNA1GO43497 2377 aa2.08□□□□□ -2.08
BRCA1-204ENST00000412061 INTS1Q8N201 2190 aaKnown RBP2.08□□□□□ -2.08
BRCA1-204ENST00000412061 LAMC3Q9Y6N6 1575 aa2.08□□□□□ -2.08
BRCA1-204ENST00000412061 MED14O60244 1454 aa2.08□□□□□ -2.08
BRCA1-204ENST00000412061 IGKV3-7A0A075B6H7 116 aa2.08□□□□□ -2.08
BRCA1-204ENST00000412061 PCNX2A6NKB5 2137 aa2.08□□□□□ -2.08
BRCA1-204ENST00000412061 MRPS14O60783 128 aaKnown RBP2.08□□□□□ -2.08
BRCA1-204ENST00000412061 GNG11P61952 73 aa2.08□□□□□ -2.08
BRCA1-204ENST00000412061 C5orf38Q86SI9 138 aa2.08□□□□□ -2.08
BRCA1-204ENST00000412061 C10orf82Q8WW14 230 aa2.08□□□□□ -2.08
BRCA1-204ENST00000412061 IFI27L1Q96BM0 104 aa2.08□□□□□ -2.08
BRCA1-204ENST00000412061 C22orf24Q9Y442 160 aa2.08□□□□□ -2.08
BRCA1-204ENST00000412061 CPSF1Q10570 1443 aaKnown RBP2.07□□□□□ -2.08
BRCA1-204ENST00000412061 CFAP74Q9C0B2 1584 aa2.07□□□□□ -2.08
BRCA1-204ENST00000412061 FANCD2Q9BXW9 1451 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms