RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 CRYGDP07320 174 aa13.69□□□□□ -0.22
PDLIM2-207ENST00000409417 SH2D6Q7Z4S9 175 aa13.69□□□□□ -0.22
PDLIM2-207ENST00000409417 LINC01551Q86U37 167 aa13.69□□□□□ -0.22
PDLIM2-207ENST00000409417 UPK3BQ9BT76 320 aa13.69□□□□□ -0.22
PDLIM2-207ENST00000409417 A0A1W2PPQ1 181 aa13.68□□□□□ -0.22
PDLIM2-207ENST00000409417 F2Z2F3 143 aa13.68□□□□□ -0.22
PDLIM2-207ENST00000409417 FAM74A3Q4VXF1 159 aa13.68□□□□□ -0.22
PDLIM2-207ENST00000409417 FAM74A4Q5TZK3 123 aa13.68□□□□□ -0.22
PDLIM2-207ENST00000409417 LYPD5Q6UWN5 251 aa13.68□□□□□ -0.22
PDLIM2-207ENST00000409417 FAM231DQ6ZW35 169 aa13.68□□□□□ -0.22
PDLIM2-207ENST00000409417 TPPP3Q9BW30 176 aa13.68□□□□□ -0.22
PDLIM2-207ENST00000409417 DNAH6Q9C0G6 4158 aa13.68□□□□□ -0.22
PDLIM2-207ENST00000409417 IGLV2-18A0A075B6J9 118 aa13.67□□□□□ -0.22
PDLIM2-207ENST00000409417 Q6ZR54 194 aa13.67□□□□□ -0.22
PDLIM2-207ENST00000409417 Q9H8V8 135 aa13.67□□□□□ -0.22
PDLIM2-207ENST00000409417 M0R2N4 97 aa13.66□□□□□ -0.22
PDLIM2-207ENST00000409417 ERVFC1-1P60608 527 aa13.66□□□□□ -0.22
PDLIM2-207ENST00000409417 SSTP61278 116 aa13.66□□□□□ -0.22
PDLIM2-207ENST00000409417 CACNG7P62955 275 aa13.66□□□□□ -0.22
PDLIM2-207ENST00000409417 TMEM241Q24JQ0 296 aa13.66□□□□□ -0.22
PDLIM2-207ENST00000409417 GATCO43716 136 aaKnown RBP13.65□□□□□ -0.22
PDLIM2-207ENST00000409417 IFITM2Q01629 132 aa13.65□□□□□ -0.22
PDLIM2-207ENST00000409417 LYZL1Q6UWQ5 148 aa13.65□□□□□ -0.22
PDLIM2-207ENST00000409417 CTRLP40313 264 aa13.64□□□□□ -0.23
PDLIM2-207ENST00000409417 SOHLH1Q5JUK2 328 aa13.64□□□□□ -0.23
PDLIM2-207ENST00000409417 CLLU1Q5K131 121 aa13.64□□□□□ -0.23
PDLIM2-207ENST00000409417 C14orf178Q8N769 122 aaPredicted RBP13.64□□□□□ -0.23
PDLIM2-207ENST00000409417 AP1S3Q96PC3 154 aa13.64□□□□□ -0.23
PDLIM2-207ENST00000409417 NBDYA0A0U1RRE5 68 aa13.63□□□□□ -0.23
PDLIM2-207ENST00000409417 TIRAPP58753 221 aa13.63□□□□□ -0.23
PDLIM2-207ENST00000409417 CT83Q5H943 113 aa13.63□□□□□ -0.23
PDLIM2-207ENST00000409417 WDR73Q6P4I2 378 aa13.63□□□□□ -0.23
PDLIM2-207ENST00000409417 A8MWL6 223 aa13.62□□□□□ -0.23
PDLIM2-207ENST00000409417 RAB4BP61018 213 aa13.62□□□□□ -0.23
PDLIM2-207ENST00000409417 CNFNQ9BYD5 112 aa13.62□□□□□ -0.23
PDLIM2-207ENST00000409417 OSTCQ9NRP0 149 aa13.62□□□□□ -0.23
PDLIM2-207ENST00000409417 Q9UF83 564 aa13.62□□□□□ -0.23
PDLIM2-207ENST00000409417 NAT8Q9UHE5 227 aa13.62□□□□□ -0.23
PDLIM2-207ENST00000409417 SMIM17P0DL12 118 aa13.61□□□□□ -0.23
PDLIM2-207ENST00000409417 GTSF1Q8WW33 167 aa13.61□□□□□ -0.23
PDLIM2-207ENST00000409417 MSRB1Q9NZV6 116 aa13.61□□□□□ -0.23
PDLIM2-207ENST00000409417 KIF25-AS1Q9Y6Z4 181 aa13.61□□□□□ -0.23
PDLIM2-207ENST00000409417 TRBV10-1A0A0K0K1A3 114 aa13.61□□□□□ -0.23
PDLIM2-207ENST00000409417 LINC00694P0DN24 101 aa13.61□□□□□ -0.23
PDLIM2-207ENST00000409417 NTF3P20783 257 aa13.61□□□□□ -0.23
PDLIM2-207ENST00000409417 RPL23P62829 140 aaKnown RBP13.61□□□□□ -0.23
PDLIM2-207ENST00000409417 ATP6V0E2Q8NHE4 81 aa13.61□□□□□ -0.23
PDLIM2-207ENST00000409417 ISOC2Q96AB3 205 aa13.61□□□□□ -0.23
PDLIM2-207ENST00000409417 GAGE12JA6NER3 117 aa13.6□□□□□ -0.23
PDLIM2-207ENST00000409417 SIVA1O15304 175 aa13.6□□□□□ -0.23
PDLIM2-207ENST00000409417 GAGE1Q13065 139 aa13.6□□□□□ -0.23
PDLIM2-207ENST00000409417 GAGE4Q13068 117 aa13.6□□□□□ -0.23
PDLIM2-207ENST00000409417 GAGE5Q13069 117 aa13.6□□□□□ -0.23
PDLIM2-207ENST00000409417 ZNF56Q15929 161 aa13.6□□□□□ -0.23
PDLIM2-207ENST00000409417 GAGE13Q4V321 117 aa13.6□□□□□ -0.23
PDLIM2-207ENST00000409417 C15orf54Q8N8G6 183 aa13.6□□□□□ -0.23
PDLIM2-207ENST00000409417 FOXA3P55318 350 aaPredicted RBP13.59□□□□□ -0.23
PDLIM2-207ENST00000409417 LINC00315P59091 139 aa13.59□□□□□ -0.23
PDLIM2-207ENST00000409417 GTSF1LQ9H1H1 148 aa13.59□□□□□ -0.23
PDLIM2-207ENST00000409417 F5H697 171 aa13.58□□□□□ -0.24
PDLIM2-207ENST00000409417 TRGC1P0CF51 173 aa13.58□□□□□ -0.24
PDLIM2-207ENST00000409417 ADIRFQ15847 76 aa13.58□□□□□ -0.24
PDLIM2-207ENST00000409417 TTC32Q5I0X7 151 aa13.58□□□□□ -0.24
PDLIM2-207ENST00000409417 TSKUQ8WUA8 353 aa13.58□□□□□ -0.24
PDLIM2-207ENST00000409417 GFRA4Q9GZZ7 299 aa13.58□□□□□ -0.24
PDLIM2-207ENST00000409417 EVI2AP22794 236 aa13.57□□□□□ -0.24
PDLIM2-207ENST00000409417 TWIST1Q15672 202 aa13.57□□□□□ -0.24
PDLIM2-207ENST00000409417 FAM231BA6NCW3 169 aa13.56□□□□□ -0.24
PDLIM2-207ENST00000409417 OR10G8Q8NGN5 311 aa13.56□□□□□ -0.24
PDLIM2-207ENST00000409417 V9GYV3 84 aa13.56□□□□□ -0.24
PDLIM2-207ENST00000409417 DNAH10Q8IVF4 4471 aa13.56□□□□□ -0.24
PDLIM2-207ENST00000409417 TRBV7-3A0A075B6L6 115 aa13.55□□□□□ -0.24
PDLIM2-207ENST00000409417 RPL36AP83881 106 aaKnown RBP13.55□□□□□ -0.24
PDLIM2-207ENST00000409417 C1orf134Q5TEV5 83 aa13.55□□□□□ -0.24
PDLIM2-207ENST00000409417 RPL36ALQ969Q0 106 aaKnown RBP13.55□□□□□ -0.24
PDLIM2-207ENST00000409417 PGLYRP4Q96LB8 373 aa13.55□□□□□ -0.24
PDLIM2-207ENST00000409417 KRTAP1-5Q9BYS1 174 aa13.55□□□□□ -0.24
PDLIM2-207ENST00000409417 HIGD1CA8MV81 97 aa13.55□□□□□ -0.24
PDLIM2-207ENST00000409417 LELP1Q5T871 98 aa13.55□□□□□ -0.24
PDLIM2-207ENST00000409417 WFDC10BQ8IUB3 73 aa13.55□□□□□ -0.24
PDLIM2-207ENST00000409417 DNAH2Q9P225 4427 aa13.54□□□□□ -0.24
PDLIM2-207ENST00000409417 RTL8CO15255 209 aa13.54□□□□□ -0.24
PDLIM2-207ENST00000409417 DPH3P1Q9H4G8 78 aa13.54□□□□□ -0.24
PDLIM2-207ENST00000409417 TRAV8-6A0A0B4J262 113 aa13.53□□□□□ -0.24
PDLIM2-207ENST00000409417 MGPP08493 103 aa13.53□□□□□ -0.24
PDLIM2-207ENST00000409417 DNAH10OSP0CZ25 163 aa13.53□□□□□ -0.24
PDLIM2-207ENST00000409417 UBE2D3P61077 147 aa13.53□□□□□ -0.24
PDLIM2-207ENST00000409417 UBE2D2P62837 147 aa13.53□□□□□ -0.24
PDLIM2-207ENST00000409417 LINC00336Q6ZUF6 198 aa13.53□□□□□ -0.24
PDLIM2-207ENST00000409417 NEXN-AS1Q8NBZ9 246 aa13.53□□□□□ -0.24
PDLIM2-207ENST00000409417 A0A087WWC5 75 aa13.52□□□□□ -0.25
PDLIM2-207ENST00000409417 H7C1H1 209 aa13.52□□□□□ -0.25
PDLIM2-207ENST00000409417 K7EP13 123 aa13.52□□□□□ -0.25
PDLIM2-207ENST00000409417 M0QY20 66 aa13.52□□□□□ -0.25
PDLIM2-207ENST00000409417 OR10J3Q5JRS4 329 aa13.52□□□□□ -0.25
PDLIM2-207ENST00000409417 BORCS7Q96B45 105 aa13.52□□□□□ -0.25
PDLIM2-207ENST00000409417 FRAS1Q86XX4 4008 aa13.51□□□□□ -0.25
PDLIM2-207ENST00000409417 IGHV3-38A0A0C4DH36 116 aa13.51□□□□□ -0.25
PDLIM2-207ENST00000409417 A0A1B0GUT8 65 aa13.51□□□□□ -0.25
PDLIM2-207ENST00000409417 BTF3P20290 206 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms