RNA–Protein interactions for RNA: ENST00000409096.5

CUL3-203, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 2,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-203ENST00000409096 DPH3Q96FX2 82 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 C11orf68Q9H3H3 251 aaKnown RBP1.03□□□□□ -2.24
CUL3-203ENST00000409096 TCEAL2Q9H3H9 227 aaPredicted RBP1.03□□□□□ -2.24
CUL3-203ENST00000409096 PCTPQ9UKL6 214 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 PTPRSQ13332 1948 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 WDR87Q6ZQQ6 2873 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 ITPR2Q14571 2701 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 DOCK1Q14185 1865 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 CRYBG1Q9Y4K1 1723 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 MCM3APO60318 1980 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 TMSB15BA0A087X1C1 80 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 LYZL6O75951 148 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 NAPSAO96009 420 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 IGKV1-5P01602 117 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 TRAPPC2P0DI81 140 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 TRAPPC2BP0DI82 140 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 RPL27AP46776 148 aaKnown RBP1.03□□□□□ -2.24
CUL3-203ENST00000409096 ZNF791Q3KP31 576 aaPredicted RBP1.03□□□□□ -2.24
CUL3-203ENST00000409096 SPANXN3Q5MJ09 141 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 SLC35E3Q7Z769 313 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 TEN1Q86WV5 123 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 TTC9CQ8N5M4 171 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 C5orf17Q8NAS9 161 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 DCANP1Q8TF63 244 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 H1FXQ92522 213 aaKnown RBP1.03□□□□□ -2.24
CUL3-203ENST00000409096 TIMM21Q9BVV7 248 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 RNF11Q9Y3C5 154 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 SOX21Q9Y651 276 aaPredicted RBP1.03□□□□□ -2.24
CUL3-203ENST00000409096 APCP25054 2843 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 POLEQ07864 2286 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 LRBAP50851 2863 aa1.03□□□□□ -2.25
CUL3-203ENST00000409096 FRYQ5TBA9 3013 aa1.03□□□□□ -2.25
CUL3-203ENST00000409096 PRKDCP78527 4128 aaKnown RBP1.03□□□□□ -2.25
CUL3-203ENST00000409096 TRAV27A0A087WT01 109 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 TRGV5A0A0B4J1U4 118 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 IGKV1D-43A0A0B4J1Z2 117 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 A0A0G2JMM0 328 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 A0A1W2PPB8 328 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 KIR3DP1A8MWS1 328 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 CLDN25C9JDP6 229 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 TAX1BP3O14907 124 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 PLA2G10O15496 165 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 C1QAP02745 245 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 TMEM258P61165 79 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 RPL26P61254 145 aaKnown RBP1.02□□□□□ -2.25
CUL3-203ENST00000409096 TMEM155Q4W5P6 130 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 MEIG1Q5JSS6 88 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 C22orf39Q6P5X5 142 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 ATOH7Q8N100 152 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 OR2T10Q8NGZ9 312 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 IMMP2LQ96T52 175 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 NDUFB11Q9NX14 153 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 RPL26L1Q9UNX3 145 aaKnown RBP1.02□□□□□ -2.25
CUL3-203ENST00000409096 APC2O95996 2303 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 CSPG4Q6UVK1 2322 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 ZFHX3Q15911 3703 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 HELZP42694 1942 aaKnown RBP1.02□□□□□ -2.25
CUL3-203ENST00000409096 PLXNA4Q9HCM2 1894 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 A0A087X0T9 212 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 A0A0D9SG52 128 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 TRBV27A0A0K0K1C4 114 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 PNMA8CA0A1B0GUJ8 204 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 CCDC179H3BU77 68 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 NPYP01303 97 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 MT-ND4LP03901 98 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 NFYBP25208 207 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 SDC2P34741 201 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 ZNF93P35789 620 aaPredicted RBP1.02□□□□□ -2.25
CUL3-203ENST00000409096 ETV6P41212 452 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 DEFA1P59665 94 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 RPL30P62888 115 aaKnown RBP1.02□□□□□ -2.25
CUL3-203ENST00000409096 DIAPH2-AS1Q14236 149 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 CLLU1Q5K131 121 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 LCN15Q6UWW0 184 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 Q6ZRN7 208 aaPredicted RBP1.02□□□□□ -2.25
CUL3-203ENST00000409096 LINC00311Q8N616 119 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 OR5D14Q8NGL3 314 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 XAGE1AQ9HD64 81 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 TP73-AS1Q9UF72 201 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 NBEAQ8NFP9 2946 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 GREB1Q4ZG55 1949 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 CCDC88CQ9P219 2028 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 MAP1AP78559 2803 aaPredicted RBP1.02□□□□□ -2.25
CUL3-203ENST00000409096 PTPRFP10586 1907 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 H3BMG7 143 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 BUB1B-PAK6H3BSN5 160 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 H3BT86 120 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 CST7O76096 145 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 ZNF705DP0CH99 300 aaPredicted RBP1.02□□□□□ -2.25
CUL3-203ENST00000409096 CRYGAP11844 174 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 CCL5P13501 91 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 HIST1H2BOP23527 126 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 HIST1H2BBP33778 126 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 GUCA1AP43080 201 aaPredicted RBP1.02□□□□□ -2.25
CUL3-203ENST00000409096 RPL28P46779 137 aaKnown RBP1.02□□□□□ -2.25
CUL3-203ENST00000409096 HIST1H2BDP58876 126 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 TPPP2P59282 170 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 HIST1H2BCP62807 126 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 ZNF90Q03938 601 aa1.02□□□□□ -2.25
CUL3-203ENST00000409096 HIST2H2BEQ16778 126 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms