RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 Q9H8V8 135 aa6.05□□□□□ -1.44
USP47-203ENST00000399455 TPRP12270 2363 aaKnown RBP6.05□□□□□ -1.44
USP47-203ENST00000399455 CCDC140Q96MF4 163 aa6.04□□□□□ -1.44
USP47-203ENST00000399455 F8VRH5 84 aa6.04□□□□□ -1.44
USP47-203ENST00000399455 MSMPQ1L6U9 139 aa6.04□□□□□ -1.44
USP47-203ENST00000399455 SMR3AQ99954 134 aa6.04□□□□□ -1.44
USP47-203ENST00000399455 FGF6P10767 208 aa6.04□□□□□ -1.44
USP47-203ENST00000399455 LINC00482Q8N8I6 264 aa6.04□□□□□ -1.44
USP47-203ENST00000399455 V9GYV3 84 aa6.04□□□□□ -1.44
USP47-203ENST00000399455 J3QQQ9 107 aa6.04□□□□□ -1.44
USP47-203ENST00000399455 CYYR1Q96J86 154 aa6.04□□□□□ -1.44
USP47-203ENST00000399455 IGHV4-28A0A0C4DH34 117 aa6.04□□□□□ -1.44
USP47-203ENST00000399455 HIST1H2BKO60814 126 aa6.04□□□□□ -1.44
USP47-203ENST00000399455 NPYP01303 97 aa6.04□□□□□ -1.44
USP47-203ENST00000399455 HIST1H2BJP06899 126 aa6.04□□□□□ -1.44
USP47-203ENST00000399455 HIST1H2BOP23527 126 aa6.04□□□□□ -1.44
USP47-203ENST00000399455 HIST1H2BBP33778 126 aa6.04□□□□□ -1.44
USP47-203ENST00000399455 HIST1H2BDP58876 126 aa6.04□□□□□ -1.44
USP47-203ENST00000399455 HIST1H2BCP62807 126 aa6.04□□□□□ -1.44
USP47-203ENST00000399455 HIST2H2BEQ16778 126 aa6.04□□□□□ -1.44
USP47-203ENST00000399455 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.04□□□□□ -1.44
USP47-203ENST00000399455 HIST1H2BHQ93079 126 aa6.04□□□□□ -1.44
USP47-203ENST00000399455 HIST1H2BNQ99877 126 aa6.04□□□□□ -1.44
USP47-203ENST00000399455 HIST1H2BMQ99879 126 aa6.04□□□□□ -1.44
USP47-203ENST00000399455 ZNF706Q9Y5V0 76 aaPredicted RBP6.04□□□□□ -1.44
USP47-203ENST00000399455 ABCA4P78363 2273 aa6.04□□□□□ -1.44
USP47-203ENST00000399455 PSMB8P28062 276 aa6.04□□□□□ -1.44
USP47-203ENST00000399455 EBI3Q14213 229 aa6.04□□□□□ -1.44
USP47-203ENST00000399455 ORMDL1Q9P0S3 153 aa6.03□□□□□ -1.44
USP47-203ENST00000399455 LINC00474Q9P2X8 69 aa6.03□□□□□ -1.44
USP47-203ENST00000399455 LRCOL1A6NCL2 159 aa6.03□□□□□ -1.44
USP47-203ENST00000399455 ARHGAP21Q5T5U3 1957 aa6.03□□□□□ -1.44
USP47-203ENST00000399455 M0R2N4 97 aa6.03□□□□□ -1.44
USP47-203ENST00000399455 FSHBP01225 129 aa6.03□□□□□ -1.44
USP47-203ENST00000399455 CXCL1P09341 107 aa6.03□□□□□ -1.44
USP47-203ENST00000399455 CARD19Q96LW7 228 aa6.03□□□□□ -1.44
USP47-203ENST00000399455 POLR3KQ9Y2Y1 108 aaPredicted RBP6.03□□□□□ -1.44
USP47-203ENST00000399455 REG3AQ06141 175 aa6.02□□□□□ -1.44
USP47-203ENST00000399455 TRBV6-1A0A0K0K1D8 114 aa6.02□□□□□ -1.45
USP47-203ENST00000399455 LGALS9CQ6DKI2 356 aa6.02□□□□□ -1.45
USP47-203ENST00000399455 UTF1Q5T230 341 aa6.02□□□□□ -1.45
USP47-203ENST00000399455 IGKV2-24A0A0C4DH68 120 aa6.02□□□□□ -1.45
USP47-203ENST00000399455 A0A0J9YWU9 116 aa6.02□□□□□ -1.45
USP47-203ENST00000399455 LY6LH3BQJ8 138 aa6.02□□□□□ -1.45
USP47-203ENST00000399455 PROP1O75360 226 aa6.02□□□□□ -1.45
USP47-203ENST00000399455 MUC6Q6W4X9 2439 aa6.02□□□□□ -1.45
USP47-203ENST00000399455 IGHV4-4A0A075B6R2 117 aa6.02□□□□□ -1.45
USP47-203ENST00000399455 K7EQG2 157 aa6.02□□□□□ -1.45
USP47-203ENST00000399455 NCR3O14931 201 aa6.01□□□□□ -1.45
USP47-203ENST00000399455 LINC00322Q6ZN03 302 aaPredicted RBP6.01□□□□□ -1.45
USP47-203ENST00000399455 DSCAMO60469 2012 aa6.01□□□□□ -1.45
USP47-203ENST00000399455 IGLV2-18A0A075B6J9 118 aa6.01□□□□□ -1.45
USP47-203ENST00000399455 A0A087WZ39 114 aa6.01□□□□□ -1.45
USP47-203ENST00000399455 ZNF726P1Q15940 193 aa6.01□□□□□ -1.45
USP47-203ENST00000399455 MED12Q93074 2177 aa6.01□□□□□ -1.45
USP47-203ENST00000399455 EML6Q6ZMW3 1958 aa6.01□□□□□ -1.45
USP47-203ENST00000399455 TRBV20-1A0A075B6N2 111 aa6.01□□□□□ -1.45
USP47-203ENST00000399455 IGHV1-58A0A0C4DH39 117 aa6.01□□□□□ -1.45
USP47-203ENST00000399455 Q8N976 141 aa6.01□□□□□ -1.45
USP47-203ENST00000399455 ODF1Q14990 250 aa6.01□□□□□ -1.45
USP47-203ENST00000399455 RPL39LQ96EH5 51 aaKnown RBP6.01□□□□□ -1.45
USP47-203ENST00000399455 ARID1AO14497 2285 aa6.01□□□□□ -1.45
USP47-203ENST00000399455 USF3Q68DE3 2245 aa6.01□□□□□ -1.45
USP47-203ENST00000399455 DIRC1Q969H9 104 aa6.01□□□□□ -1.45
USP47-203ENST00000399455 NCOR1O75376 2440 aa6.01□□□□□ -1.45
USP47-203ENST00000399455 C3orf79P0CE67 100 aa6□□□□□ -1.45
USP47-203ENST00000399455 C18orf32Q8TCD1 76 aa6□□□□□ -1.45
USP47-203ENST00000399455 ADAMTS20P59510 1910 aa6□□□□□ -1.45
USP47-203ENST00000399455 IFITM1P13164 125 aa6□□□□□ -1.45
USP47-203ENST00000399455 UFSP1Q6NVU6 142 aa6□□□□□ -1.45
USP47-203ENST00000399455 Q6ZVH6 145 aa6□□□□□ -1.45
USP47-203ENST00000399455 CACNA1GO43497 2377 aa6□□□□□ -1.45
USP47-203ENST00000399455 PCDH15Q96QU1 1955 aa6□□□□□ -1.45
USP47-203ENST00000399455 ZNF318Q5VUA4 2279 aa6□□□□□ -1.45
USP47-203ENST00000399455 CACNA1DQ01668 2161 aa6□□□□□ -1.45
USP47-203ENST00000399455 KRTAP10-9P60411 292 aa5.99□□□□□ -1.45
USP47-203ENST00000399455 LINC00269Q8N2A0 174 aa5.99□□□□□ -1.45
USP47-203ENST00000399455 MRPL35Q9NZE8 188 aaKnown RBP5.99□□□□□ -1.45
USP47-203ENST00000399455 A0A1B0GV90 55 aa5.99□□□□□ -1.45
USP47-203ENST00000399455 C9JAW5 83 aa5.99□□□□□ -1.45
USP47-203ENST00000399455 IGHV4-30-4P0DP06 118 aa5.99□□□□□ -1.45
USP47-203ENST00000399455 MIAQ16674 131 aa5.99□□□□□ -1.45
USP47-203ENST00000399455 KPRPQ5T749 579 aaPredicted RBP5.99□□□□□ -1.45
USP47-203ENST00000399455 HIST1H2BLQ99880 126 aa5.99□□□□□ -1.45
USP47-203ENST00000399455 PRAC2D3DTV9 90 aa5.99□□□□□ -1.45
USP47-203ENST00000399455 TDRG1Q3Y452 100 aa5.99□□□□□ -1.45
USP47-203ENST00000399455 HIGD2BQ4VC39 106 aa5.99□□□□□ -1.45
USP47-203ENST00000399455 OXLD1Q5BKU9 147 aa5.99□□□□□ -1.45
USP47-203ENST00000399455 Q6ZTI0 123 aa5.99□□□□□ -1.45
USP47-203ENST00000399455 DOCK10Q96BY6 2186 aa5.99□□□□□ -1.45
USP47-203ENST00000399455 IGLC2P0DOY2 106 aa5.99□□□□□ -1.45
USP47-203ENST00000399455 MPV17L2Q567V2 206 aa5.99□□□□□ -1.45
USP47-203ENST00000399455 SND1-IT1Q9HBX3 110 aa5.99□□□□□ -1.45
USP47-203ENST00000399455 MDFICQ9P1T7 246 aa5.99□□□□□ -1.45
USP47-203ENST00000399455 HIST3H2BBQ8N257 126 aa5.98□□□□□ -1.45
USP47-203ENST00000399455 UBE2D4Q9Y2X8 147 aa5.98□□□□□ -1.45
USP47-203ENST00000399455 WIPF3A6NGB9 483 aa5.98□□□□□ -1.45
USP47-203ENST00000399455 H0YGX0 51 aa5.98□□□□□ -1.45
USP47-203ENST00000399455 OPRPNQ99935 248 aaPredicted RBP5.98□□□□□ -1.45
USP47-203ENST00000399455 CHD3Q12873 2000 aaKnown RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms