RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 GAGE12JA6NER3 117 aa10.02□□□□□ -0.81
SMIM11A-203ENST00000399299 IBA57-AS1B1ANH7 110 aa10.02□□□□□ -0.81
SMIM11A-203ENST00000399299 M0R381 172 aa10.02□□□□□ -0.81
SMIM11A-203ENST00000399299 RPL35P42766 123 aaKnown RBP10.02□□□□□ -0.81
SMIM11A-203ENST00000399299 CCL20P78556 96 aa10.02□□□□□ -0.81
SMIM11A-203ENST00000399299 GAGE1Q13065 139 aa10.02□□□□□ -0.81
SMIM11A-203ENST00000399299 GAGE4Q13068 117 aa10.02□□□□□ -0.81
SMIM11A-203ENST00000399299 GAGE5Q13069 117 aa10.02□□□□□ -0.81
SMIM11A-203ENST00000399299 GAGE13Q4V321 117 aa10.02□□□□□ -0.81
SMIM11A-203ENST00000399299 FAM74A4Q5TZK3 123 aa10.02□□□□□ -0.81
SMIM11A-203ENST00000399299 CDPF1Q6NVV7 123 aa10.02□□□□□ -0.81
SMIM11A-203ENST00000399299 SLC51BQ86UW2 128 aa10.02□□□□□ -0.81
SMIM11A-203ENST00000399299 C14orf178Q8N769 122 aaPredicted RBP10.02□□□□□ -0.81
SMIM11A-203ENST00000399299 A0A087WWC5 75 aa10.01□□□□□ -0.81
SMIM11A-203ENST00000399299 DNAH5Q8TE73 4624 aa10□□□□□ -0.81
SMIM11A-203ENST00000399299 A0A087WWL8 130 aa10□□□□□ -0.81
SMIM11A-203ENST00000399299 SNAI2O43623 268 aa10□□□□□ -0.81
SMIM11A-203ENST00000399299 RPL19P84098 196 aaKnown RBP10□□□□□ -0.81
SMIM11A-203ENST00000399299 LAGE3Q14657 143 aa10□□□□□ -0.81
SMIM11A-203ENST00000399299 DERL1Q9BUN8 251 aa10□□□□□ -0.81
SMIM11A-203ENST00000399299 SSBP4Q9BWG4 385 aaPredicted RBP10□□□□□ -0.81
SMIM11A-203ENST00000399299 Q9UF83 564 aa10□□□□□ -0.81
SMIM11A-203ENST00000399299 RYR1P21817 5038 aa9.99□□□□□ -0.81
SMIM11A-203ENST00000399299 TRBV10-1A0A0K0K1A3 114 aa9.99□□□□□ -0.81
SMIM11A-203ENST00000399299 OR5AL1P0C617 328 aa9.99□□□□□ -0.81
SMIM11A-203ENST00000399299 MEF2BQ02080 365 aaPredicted RBP9.99□□□□□ -0.81
SMIM11A-203ENST00000399299 PRR27Q6MZM9 219 aa9.99□□□□□ -0.81
SMIM11A-203ENST00000399299 SMIM12Q96EX1 92 aa9.99□□□□□ -0.81
SMIM11A-203ENST00000399299 APOBP04114 4563 aaKnown RBP9.99□□□□□ -0.81
SMIM11A-203ENST00000399299 PDE6DO43924 150 aa9.98□□□□□ -0.81
SMIM11A-203ENST00000399299 IFNA1P01562 189 aa9.98□□□□□ -0.81
SMIM11A-203ENST00000399299 IGHV3-30P01768 117 aa9.98□□□□□ -0.81
SMIM11A-203ENST00000399299 IGHV3-33P01772 117 aa9.98□□□□□ -0.81
SMIM11A-203ENST00000399299 IGHV3-30-3P0DP02 117 aa9.98□□□□□ -0.81
SMIM11A-203ENST00000399299 IGHV3-30-5P0DP03 117 aa9.98□□□□□ -0.81
SMIM11A-203ENST00000399299 OR10AG1Q8NH19 301 aa9.98□□□□□ -0.81
SMIM11A-203ENST00000399299 CENPWQ5EE01 88 aa9.97□□□□□ -0.81
SMIM11A-203ENST00000399299 AKAP14Q86UN6 197 aa9.97□□□□□ -0.81
SMIM11A-203ENST00000399299 PSCAO43653 123 aa9.96□□□□□ -0.82
SMIM11A-203ENST00000399299 IGLV2-8P01709 118 aa9.96□□□□□ -0.82
SMIM11A-203ENST00000399299 BCL2P10415 239 aa9.96□□□□□ -0.82
SMIM11A-203ENST00000399299 TAGLN2P37802 199 aaKnown RBP9.96□□□□□ -0.82
SMIM11A-203ENST00000399299 RAB4BP61018 213 aa9.96□□□□□ -0.82
SMIM11A-203ENST00000399299 RPL36AP83881 106 aaKnown RBP9.96□□□□□ -0.82
SMIM11A-203ENST00000399299 OR10G8Q8NGN5 311 aa9.96□□□□□ -0.82
SMIM11A-203ENST00000399299 RPL36ALQ969Q0 106 aaKnown RBP9.96□□□□□ -0.82
SMIM11A-203ENST00000399299 TRBV7-3A0A075B6L6 115 aa9.95□□□□□ -0.82
SMIM11A-203ENST00000399299 GNG4P50150 75 aa9.95□□□□□ -0.82
SMIM11A-203ENST00000399299 UBE2D3P61077 147 aa9.95□□□□□ -0.82
SMIM11A-203ENST00000399299 UBE2D2P62837 147 aa9.95□□□□□ -0.82
SMIM11A-203ENST00000399299 SPANXN1Q5VSR9 72 aa9.95□□□□□ -0.82
SMIM11A-203ENST00000399299 C9orf62Q8N4C0 152 aa9.95□□□□□ -0.82
SMIM11A-203ENST00000399299 MAPKAPK5-AS1Q8N8E1 139 aa9.95□□□□□ -0.82
SMIM11A-203ENST00000399299 Q9HAA7 133 aa9.95□□□□□ -0.82
SMIM11A-203ENST00000399299 C19orf71A6NCJ1 209 aa9.94□□□□□ -0.82
SMIM11A-203ENST00000399299 LRCOL1A6NCL2 159 aa9.94□□□□□ -0.82
SMIM11A-203ENST00000399299 RPS20P60866 119 aaKnown RBP9.94□□□□□ -0.82
SMIM11A-203ENST00000399299 ZNF56Q15929 161 aa9.94□□□□□ -0.82
SMIM11A-203ENST00000399299 TOR2AQ5JU69 321 aa9.94□□□□□ -0.82
SMIM11A-203ENST00000399299 Q8N3U1 123 aa9.94□□□□□ -0.82
SMIM11A-203ENST00000399299 DAZAP1Q96EP5 407 aaKnown RBP9.94□□□□□ -0.82
SMIM11A-203ENST00000399299 TM2D2Q9BX73 214 aa9.94□□□□□ -0.82
SMIM11A-203ENST00000399299 VAX2Q9UIW0 290 aa9.94□□□□□ -0.82
SMIM11A-203ENST00000399299 TRBV20OR9-2A0A075B6H5 130 aa9.93□□□□□ -0.82
SMIM11A-203ENST00000399299 TRAV8-3A0A0A6YYJ7 113 aa9.93□□□□□ -0.82
SMIM11A-203ENST00000399299 RAB19A4D1S5 217 aa9.93□□□□□ -0.82
SMIM11A-203ENST00000399299 IGLC6P0CF74 106 aa9.93□□□□□ -0.82
SMIM11A-203ENST00000399299 NIT1Q86X76 327 aa9.93□□□□□ -0.82
SMIM11A-203ENST00000399299 NTN5Q8WTR8 489 aaPredicted RBP9.93□□□□□ -0.82
SMIM11A-203ENST00000399299 AP1S3Q96PC3 154 aa9.93□□□□□ -0.82
SMIM11A-203ENST00000399299 CHCHD7Q9BUK0 85 aa9.93□□□□□ -0.82
SMIM11A-203ENST00000399299 KRTAP4-5Q9BYR2 181 aa9.93□□□□□ -0.82
SMIM11A-203ENST00000399299 BIN3Q9NQY0 253 aa9.93□□□□□ -0.82
SMIM11A-203ENST00000399299 MED9Q9NWA0 146 aa9.93□□□□□ -0.82
SMIM11A-203ENST00000399299 DAZ4Q86SG3 579 aaKnown RBP9.92□□□□□ -0.82
SMIM11A-203ENST00000399299 Q8N1X5 172 aa9.92□□□□□ -0.82
SMIM11A-203ENST00000399299 NEXN-AS1Q8NBZ9 246 aa9.92□□□□□ -0.82
SMIM11A-203ENST00000399299 OR2D3Q8NGH3 330 aa9.92□□□□□ -0.82
SMIM11A-203ENST00000399299 DAZ3Q9NR90 486 aaKnown RBP9.92□□□□□ -0.82
SMIM11A-203ENST00000399299 URGCP-MRPS24S4R325 110 aa9.92□□□□□ -0.82
SMIM11A-203ENST00000399299 hCG_2014768A0A024R1R8 64 aa9.91□□□□□ -0.82
SMIM11A-203ENST00000399299 MUC21A0A0G2JKD1 596 aa9.91□□□□□ -0.82
SMIM11A-203ENST00000399299 MUC21A0A140T8X8 626 aa9.91□□□□□ -0.82
SMIM11A-203ENST00000399299 XKRY2A2RUG3 117 aa9.91□□□□□ -0.82
SMIM11A-203ENST00000399299 SMIM17P0DL12 118 aa9.91□□□□□ -0.82
SMIM11A-203ENST00000399299 FUSP35637 526 aaKnown RBP eCLIP9.91□□□□□ -0.82
SMIM11A-203ENST00000399299 FER1L6-AS1Q8NA97 138 aa9.91□□□□□ -0.82
SMIM11A-203ENST00000399299 KIF25-AS1Q9Y6Z4 181 aa9.91□□□□□ -0.82
SMIM11A-203ENST00000399299 PCLOQ9Y6V0 5065 aa9.91□□□□□ -0.82
SMIM11A-203ENST00000399299 F2Z2F3 143 aa9.9□□□□□ -0.82
SMIM11A-203ENST00000399299 P01737 135 aa9.9□□□□□ -0.82
SMIM11A-203ENST00000399299 GZMBP10144 247 aa9.9□□□□□ -0.82
SMIM11A-203ENST00000399299 CACNG7P62955 275 aa9.9□□□□□ -0.82
SMIM11A-203ENST00000399299 Q8N814 137 aa9.9□□□□□ -0.82
SMIM11A-203ENST00000399299 COX11Q9Y6N1 276 aa9.9□□□□□ -0.82
SMIM11A-203ENST00000399299 A0A087WX48 190 aa9.89□□□□□ -0.83
SMIM11A-203ENST00000399299 TRBV6-8A0A0A6YYG3 113 aa9.89□□□□□ -0.83
SMIM11A-203ENST00000399299 F5H697 171 aa9.89□□□□□ -0.83
SMIM11A-203ENST00000399299 GCSHP23434 173 aa9.89□□□□□ -0.83
SMIM11A-203ENST00000399299 KRTAP10-1P60331 282 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms