RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 DPH3P1Q9H4G8 78 aa7.48□□□□□ -1.21
PTCHD4-202ENST00000398738 A0A0J9YY99 117 aa7.48□□□□□ -1.21
PTCHD4-202ENST00000398738 PRSS2P07478 247 aa7.48□□□□□ -1.21
PTCHD4-202ENST00000398738 CD7P09564 240 aa7.48□□□□□ -1.21
PTCHD4-202ENST00000398738 ASIPP42127 132 aa7.48□□□□□ -1.21
PTCHD4-202ENST00000398738 UBE2D1P51668 147 aa7.48□□□□□ -1.21
PTCHD4-202ENST00000398738 HERVK_113P61574 105 aa7.48□□□□□ -1.21
PTCHD4-202ENST00000398738 C3orf56Q8N813 242 aa7.48□□□□□ -1.21
PTCHD4-202ENST00000398738 RNF152Q8N8N0 203 aa7.48□□□□□ -1.21
PTCHD4-202ENST00000398738 NTN5Q8WTR8 489 aaPredicted RBP7.47□□□□□ -1.21
PTCHD4-202ENST00000398738 TIMD4Q96H15 378 aa7.47□□□□□ -1.21
PTCHD4-202ENST00000398738 A4D1N5 150 aa7.47□□□□□ -1.21
PTCHD4-202ENST00000398738 SLC25A20O43772 301 aa7.47□□□□□ -1.21
PTCHD4-202ENST00000398738 MALP21145 153 aa7.47□□□□□ -1.21
PTCHD4-202ENST00000398738 IGF2RP11717 2491 aa7.47□□□□□ -1.21
PTCHD4-202ENST00000398738 CSPG4Q6UVK1 2322 aa7.46□□□□□ -1.21
PTCHD4-202ENST00000398738 CRYGDP07320 174 aa7.46□□□□□ -1.21
PTCHD4-202ENST00000398738 LGALS3P17931 250 aaKnown RBP7.46□□□□□ -1.21
PTCHD4-202ENST00000398738 IGFL3Q6UXB1 125 aa7.46□□□□□ -1.21
PTCHD4-202ENST00000398738 Q8N9W7 124 aa7.46□□□□□ -1.21
PTCHD4-202ENST00000398738 PRO1854Q9UHT4 67 aa7.46□□□□□ -1.21
PTCHD4-202ENST00000398738 ERG28Q9UKR5 140 aa7.46□□□□□ -1.21
PTCHD4-202ENST00000398738 CRLF1O75462 422 aa7.46□□□□□ -1.22
PTCHD4-202ENST00000398738 LYRM7Q5U5X0 104 aa7.46□□□□□ -1.22
PTCHD4-202ENST00000398738 OR10J6PQ8NGY7 276 aa7.46□□□□□ -1.22
PTCHD4-202ENST00000398738 AJUBAQ96IF1 538 aa7.46□□□□□ -1.22
PTCHD4-202ENST00000398738 TRAV4A0A0B4J268 109 aa7.46□□□□□ -1.22
PTCHD4-202ENST00000398738 TRBV12-3P01733 135 aa7.46□□□□□ -1.22
PTCHD4-202ENST00000398738 UBE2D3P61077 147 aa7.46□□□□□ -1.22
PTCHD4-202ENST00000398738 UBE2D2P62837 147 aa7.46□□□□□ -1.22
PTCHD4-202ENST00000398738 GAGE2BQ13066 116 aa7.46□□□□□ -1.22
PTCHD4-202ENST00000398738 GAGE2EQ4V326 116 aa7.46□□□□□ -1.22
PTCHD4-202ENST00000398738 C10orf126Q8N4M7 172 aa7.46□□□□□ -1.22
PTCHD4-202ENST00000398738 GAGE2DQ9UEU5 116 aa7.46□□□□□ -1.22
PTCHD4-202ENST00000398738 SNCGO76070 127 aa7.45□□□□□ -1.22
PTCHD4-202ENST00000398738 TSHBP01222 138 aa7.45□□□□□ -1.22
PTCHD4-202ENST00000398738 UNQ9165/PRO28630Q6UXU0 137 aa7.45□□□□□ -1.22
PTCHD4-202ENST00000398738 ZNF580Q9UK33 172 aa7.45□□□□□ -1.22
PTCHD4-202ENST00000398738 ELANEP08246 267 aa7.45□□□□□ -1.22
PTCHD4-202ENST00000398738 COX6B1P14854 86 aa7.45□□□□□ -1.22
PTCHD4-202ENST00000398738 ZFP36P26651 326 aaKnown RBP7.45□□□□□ -1.22
PTCHD4-202ENST00000398738 TTC32Q5I0X7 151 aa7.45□□□□□ -1.22
PTCHD4-202ENST00000398738 UBTD1Q9HAC8 227 aa7.45□□□□□ -1.22
PTCHD4-202ENST00000398738 TRAV21A0A0B4J279 112 aa7.44□□□□□ -1.22
PTCHD4-202ENST00000398738 TEX49A0A1B0GTD5 131 aa7.44□□□□□ -1.22
PTCHD4-202ENST00000398738 HTN1P15515 57 aa7.44□□□□□ -1.22
PTCHD4-202ENST00000398738 ATP6V0E2Q8NHE4 81 aa7.44□□□□□ -1.22
PTCHD4-202ENST00000398738 ZNRF2Q8NHG8 242 aa7.44□□□□□ -1.22
PTCHD4-202ENST00000398738 TMEM190Q8WZ59 177 aa7.44□□□□□ -1.22
PTCHD4-202ENST00000398738 LINC00477Q96M19 166 aa7.44□□□□□ -1.22
PTCHD4-202ENST00000398738 PTPRQQ9UMZ3 2332 aa7.44□□□□□ -1.22
PTCHD4-202ENST00000398738 RBAKDNA6NC62 111 aa7.44□□□□□ -1.22
PTCHD4-202ENST00000398738 J3QQQ9 107 aa7.44□□□□□ -1.22
PTCHD4-202ENST00000398738 IGHV3-30P01768 117 aa7.44□□□□□ -1.22
PTCHD4-202ENST00000398738 IGHV3-30-5P0DP03 117 aa7.44□□□□□ -1.22
PTCHD4-202ENST00000398738 EEF1AKMT3Q96AZ1 226 aa7.44□□□□□ -1.22
PTCHD4-202ENST00000398738 IGLV4-69A0A075B6H9 119 aa7.44□□□□□ -1.22
PTCHD4-202ENST00000398738 GAGE5Q13069 117 aa7.44□□□□□ -1.22
PTCHD4-202ENST00000398738 GAGE6Q13070 117 aa7.44□□□□□ -1.22
PTCHD4-202ENST00000398738 RNASE13Q5GAN3 156 aaKnown RBP7.44□□□□□ -1.22
PTCHD4-202ENST00000398738 C9orf47Q6ZRZ4 202 aa7.44□□□□□ -1.22
PTCHD4-202ENST00000398738 ZFAND2AQ8N6M9 145 aa7.44□□□□□ -1.22
PTCHD4-202ENST00000398738 NACAE9PAV3 2078 aa7.43□□□□□ -1.22
PTCHD4-202ENST00000398738 CCDC179H3BU77 68 aa7.43□□□□□ -1.22
PTCHD4-202ENST00000398738 PMVKQ15126 192 aa7.43□□□□□ -1.22
PTCHD4-202ENST00000398738 MUSTN1Q8IVN3 82 aa7.43□□□□□ -1.22
PTCHD4-202ENST00000398738 LY6G5BQ8NDX9 201 aa7.43□□□□□ -1.22
PTCHD4-202ENST00000398738 TRAV12-3A0A0B4J271 114 aa7.43□□□□□ -1.22
PTCHD4-202ENST00000398738 SDHAF1A6NFY7 115 aa7.43□□□□□ -1.22
PTCHD4-202ENST00000398738 FAM110DQ8TAY7 271 aaPredicted RBP7.43□□□□□ -1.22
PTCHD4-202ENST00000398738 ODF3BA8MYP8 253 aa7.42□□□□□ -1.22
PTCHD4-202ENST00000398738 CCL21O00585 134 aa7.42□□□□□ -1.22
PTCHD4-202ENST00000398738 SAA4P35542 130 aa7.42□□□□□ -1.22
PTCHD4-202ENST00000398738 Q6ZSV7 163 aa7.42□□□□□ -1.22
PTCHD4-202ENST00000398738 GPHB5Q86YW7 130 aa7.42□□□□□ -1.22
PTCHD4-202ENST00000398738 Q8NA96 180 aa7.42□□□□□ -1.22
PTCHD4-202ENST00000398738 SPXQ9BT56 116 aa7.42□□□□□ -1.22
PTCHD4-202ENST00000398738 ZNF56Q15929 161 aa7.42□□□□□ -1.22
PTCHD4-202ENST00000398738 HRNRQ86YZ3 2850 aaPredicted RBP7.42□□□□□ -1.22
PTCHD4-202ENST00000398738 SMIM20Q8N5G0 67 aa7.42□□□□□ -1.22
PTCHD4-202ENST00000398738 TRAV12-2A0A075B6T6 113 aa7.41□□□□□ -1.22
PTCHD4-202ENST00000398738 RNASE3P12724 160 aaKnown RBP7.41□□□□□ -1.22
PTCHD4-202ENST00000398738 CDSNQ15517 529 aa7.41□□□□□ -1.22
PTCHD4-202ENST00000398738 LY6EQ16553 131 aa7.41□□□□□ -1.22
PTCHD4-202ENST00000398738 SUMO4Q6EEV6 95 aa7.41□□□□□ -1.22
PTCHD4-202ENST00000398738 FAM159AQ6UWV7 190 aa7.41□□□□□ -1.22
PTCHD4-202ENST00000398738 SLC25A29Q8N8R3 303 aa7.41□□□□□ -1.22
PTCHD4-202ENST00000398738 IGHV4-4A0A075B6R2 117 aa7.41□□□□□ -1.22
PTCHD4-202ENST00000398738 IGHV3-73A0A0B4J1V6 119 aa7.41□□□□□ -1.22
PTCHD4-202ENST00000398738 TMEM262E9PQX1 116 aa7.41□□□□□ -1.22
PTCHD4-202ENST00000398738 A0A0J9YXV3 536 aa7.4□□□□□ -1.22
PTCHD4-202ENST00000398738 LINC01619G3V211 115 aa7.4□□□□□ -1.22
PTCHD4-202ENST00000398738 EDN2P20800 178 aa7.4□□□□□ -1.22
PTCHD4-202ENST00000398738 MUC4Q99102 2169 aa7.4□□□□□ -1.22
PTCHD4-202ENST00000398738 NHLRC4P0CG21 123 aaPredicted RBP7.4□□□□□ -1.22
PTCHD4-202ENST00000398738 Q8N6K4 173 aa7.4□□□□□ -1.22
PTCHD4-202ENST00000398738 C15orf53Q8NAA6 179 aa7.4□□□□□ -1.22
PTCHD4-202ENST00000398738 A0A0U1RRA0 63 aa7.4□□□□□ -1.23
PTCHD4-202ENST00000398738 IGIPA6NJ69 53 aa7.4□□□□□ -1.23
PTCHD4-202ENST00000398738 A8MZ25 164 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms