RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 PIEZO2Q9H5I5 2752 aa8.53□□□□□ -1.04
HPS4-202ENST00000398145 SOCS3O14543 225 aa8.52□□□□□ -1.04
HPS4-202ENST00000398145 ZNRF2Q8NHG8 242 aa8.52□□□□□ -1.04
HPS4-202ENST00000398145 SPANXB1Q9NS25 103 aaPredicted RBP8.52□□□□□ -1.04
HPS4-202ENST00000398145 H3BUA1 57 aa8.52□□□□□ -1.05
HPS4-202ENST00000398145 CMC4P56277 68 aaPredicted RBP8.52□□□□□ -1.05
HPS4-202ENST00000398145 XCL2Q9UBD3 114 aa8.52□□□□□ -1.05
HPS4-202ENST00000398145 ATRXP46100 2492 aa8.52□□□□□ -1.05
HPS4-202ENST00000398145 SORL1Q92673 2214 aa8.52□□□□□ -1.05
HPS4-202ENST00000398145 HERVK_113P63121 156 aa8.52□□□□□ -1.05
HPS4-202ENST00000398145 TCTEX1D4Q5JR98 221 aa8.52□□□□□ -1.05
HPS4-202ENST00000398145 PIFOQ8TCI5 191 aa8.52□□□□□ -1.05
HPS4-202ENST00000398145 LAMTOR3Q9UHA4 124 aa8.52□□□□□ -1.05
HPS4-202ENST00000398145 MYO9AB2RTY4 2548 aa8.52□□□□□ -1.05
HPS4-202ENST00000398145 DNAH12Q6ZR08 3092 aa8.52□□□□□ -1.05
HPS4-202ENST00000398145 CEP350Q5VT06 3117 aa8.52□□□□□ -1.05
HPS4-202ENST00000398145 MUC6Q6W4X9 2439 aa8.51□□□□□ -1.05
HPS4-202ENST00000398145 OTOGLQ3ZCN5 2332 aa8.51□□□□□ -1.05
HPS4-202ENST00000398145 PRSS47A8MTI9 375 aa8.51□□□□□ -1.05
HPS4-202ENST00000398145 GRNP28799 593 aaKnown RBP8.51□□□□□ -1.05
HPS4-202ENST00000398145 IGLV2-11P01706 119 aa8.5□□□□□ -1.05
HPS4-202ENST00000398145 NDUFA11Q86Y39 141 aa8.5□□□□□ -1.05
HPS4-202ENST00000398145 ACYP1P07311 99 aa8.5□□□□□ -1.05
HPS4-202ENST00000398145 MED14OSP0DP75 135 aa8.5□□□□□ -1.05
HPS4-202ENST00000398145 HTN3P15516 51 aa8.5□□□□□ -1.05
HPS4-202ENST00000398145 TLN1Q9Y490 2541 aaKnown RBP8.5□□□□□ -1.05
HPS4-202ENST00000398145 U3KQK5 164 aa8.5□□□□□ -1.05
HPS4-202ENST00000398145 TRAV13-2A0A0B4J235 113 aa8.5□□□□□ -1.05
HPS4-202ENST00000398145 PFN2P35080 140 aa8.5□□□□□ -1.05
HPS4-202ENST00000398145 SMIM20Q8N5G0 67 aa8.5□□□□□ -1.05
HPS4-202ENST00000398145 CUL9Q8IWT3 2517 aa8.5□□□□□ -1.05
HPS4-202ENST00000398145 Q9H8V8 135 aa8.49□□□□□ -1.05
HPS4-202ENST00000398145 URB1-AS1Q96HZ7 61 aa8.49□□□□□ -1.05
HPS4-202ENST00000398145 GATA3P23771 443 aa8.49□□□□□ -1.05
HPS4-202ENST00000398145 Q6ZUT4 128 aa8.49□□□□□ -1.05
HPS4-202ENST00000398145 ICOSQ9Y6W8 199 aa8.49□□□□□ -1.05
HPS4-202ENST00000398145 MAPKAPK5-AS1Q8N8E1 139 aa8.48□□□□□ -1.05
HPS4-202ENST00000398145 TMEM243Q9BU79 118 aa8.48□□□□□ -1.05
HPS4-202ENST00000398145 CRYGBP07316 175 aa8.48□□□□□ -1.05
HPS4-202ENST00000398145 BAALC-AS2P0C853 105 aa8.48□□□□□ -1.05
HPS4-202ENST00000398145 TRBV10-2A0A0K0K1G8 114 aa8.48□□□□□ -1.05
HPS4-202ENST00000398145 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.47□□□□□ -1.05
HPS4-202ENST00000398145 IGKV2-29A2NJV5 120 aaPredicted RBP8.47□□□□□ -1.05
HPS4-202ENST00000398145 TCL1BO95988 128 aa8.47□□□□□ -1.05
HPS4-202ENST00000398145 GNLYP22749 145 aa8.47□□□□□ -1.05
HPS4-202ENST00000398145 SS18Q15532 418 aa8.47□□□□□ -1.05
HPS4-202ENST00000398145 DEFB1P60022 68 aa8.47□□□□□ -1.05
HPS4-202ENST00000398145 AJUBAQ96IF1 538 aa8.47□□□□□ -1.05
HPS4-202ENST00000398145 H3BT86 120 aa8.47□□□□□ -1.05
HPS4-202ENST00000398145 RPL35AP18077 110 aaKnown RBP8.46□□□□□ -1.05
HPS4-202ENST00000398145 LINC01356Q8N9X3 169 aa8.46□□□□□ -1.05
HPS4-202ENST00000398145 CPAMD8Q8IZJ3 1885 aa8.46□□□□□ -1.05
HPS4-202ENST00000398145 MT-ATP8P03928 68 aa8.46□□□□□ -1.05
HPS4-202ENST00000398145 C22orf34Q6ZV56 151 aa8.46□□□□□ -1.05
HPS4-202ENST00000398145 RNF185Q96GF1 192 aa8.46□□□□□ -1.06
HPS4-202ENST00000398145 NOTCH2Q04721 2471 aa8.46□□□□□ -1.06
HPS4-202ENST00000398145 IGF2-ASQ6U949 168 aa8.46□□□□□ -1.06
HPS4-202ENST00000398145 C5orf56Q8N8D9 126 aa8.46□□□□□ -1.06
HPS4-202ENST00000398145 NEXN-AS1Q8NBZ9 246 aa8.46□□□□□ -1.06
HPS4-202ENST00000398145 UBL5Q9BZL1 73 aa8.46□□□□□ -1.06
HPS4-202ENST00000398145 TRACP01848 142 aa8.45□□□□□ -1.06
HPS4-202ENST00000398145 Q8N1Y9 231 aa8.45□□□□□ -1.06
HPS4-202ENST00000398145 PCNTO95613 3336 aa8.45□□□□□ -1.06
HPS4-202ENST00000398145 ELANEP08246 267 aa8.45□□□□□ -1.06
HPS4-202ENST00000398145 RNF183Q96D59 192 aa8.45□□□□□ -1.06
HPS4-202ENST00000398145 LINC01619G3V211 115 aa8.44□□□□□ -1.06
HPS4-202ENST00000398145 DEFB130BP0DP73 79 aa8.44□□□□□ -1.06
HPS4-202ENST00000398145 DEFB130AP0DP74 79 aa8.44□□□□□ -1.06
HPS4-202ENST00000398145 C20orf203Q8NBC4 194 aa8.44□□□□□ -1.06
HPS4-202ENST00000398145 BLCAPP62952 87 aa8.44□□□□□ -1.06
HPS4-202ENST00000398145 LRP4O75096 1905 aa8.44□□□□□ -1.06
HPS4-202ENST00000398145 MYO18BQ8IUG5 2567 aa8.44□□□□□ -1.06
HPS4-202ENST00000398145 SLC25A29Q8N8R3 303 aa8.44□□□□□ -1.06
HPS4-202ENST00000398145 PTPRSQ13332 1948 aa8.44□□□□□ -1.06
HPS4-202ENST00000398145 FAM236AA0A1B0GUQ0 79 aa8.44□□□□□ -1.06
HPS4-202ENST00000398145 FAM236BA0A1B0GV22 79 aa8.44□□□□□ -1.06
HPS4-202ENST00000398145 UFSP1Q6NVU6 142 aa8.44□□□□□ -1.06
HPS4-202ENST00000398145 HERV-K104P63124 156 aa8.43□□□□□ -1.06
HPS4-202ENST00000398145 UNQ9165/PRO28630Q6UXU0 137 aa8.43□□□□□ -1.06
HPS4-202ENST00000398145 SPANXCQ9NY87 97 aa8.43□□□□□ -1.06
HPS4-202ENST00000398145 RS1O15537 224 aa8.43□□□□□ -1.06
HPS4-202ENST00000398145 A0A0J9YY99 117 aa8.43□□□□□ -1.06
HPS4-202ENST00000398145 IGHV3-30-3P0DP02 117 aa8.43□□□□□ -1.06
HPS4-202ENST00000398145 CFHR3Q02985 330 aa8.43□□□□□ -1.06
HPS4-202ENST00000398145 CCDC140Q96MF4 163 aa8.43□□□□□ -1.06
HPS4-202ENST00000398145 ZFP36P26651 326 aaKnown RBP8.42□□□□□ -1.06
HPS4-202ENST00000398145 OPRPNQ99935 248 aaPredicted RBP8.42□□□□□ -1.06
HPS4-202ENST00000398145 CITED1Q99966 193 aa8.42□□□□□ -1.06
HPS4-202ENST00000398145 U3KQE9 123 aa8.42□□□□□ -1.06
HPS4-202ENST00000398145 TINCRA0A1B0GVN0 87 aa8.42□□□□□ -1.06
HPS4-202ENST00000398145 NXPH4O95158 308 aa8.42□□□□□ -1.06
HPS4-202ENST00000398145 DAND5Q8N907 189 aa8.42□□□□□ -1.06
HPS4-202ENST00000398145 HOXD3P31249 432 aaPredicted RBP8.42□□□□□ -1.06
HPS4-202ENST00000398145 ARHGAP32A7KAX9 2087 aa8.42□□□□□ -1.06
HPS4-202ENST00000398145 K7EMT4 169 aa8.42□□□□□ -1.06
HPS4-202ENST00000398145 LGALS9O00182 355 aa8.42□□□□□ -1.06
HPS4-202ENST00000398145 IGHV1-58A0A0C4DH39 117 aa8.41□□□□□ -1.06
HPS4-202ENST00000398145 CLEC2BQ92478 149 aa8.41□□□□□ -1.06
HPS4-202ENST00000398145 A0A0B4J2C4 111 aa8.41□□□□□ -1.06
HPS4-202ENST00000398145 ODF3BA8MYP8 253 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms