RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 AZU1P20160 251 aa13.72□□□□□ -0.21
TSPAN4-204ENST00000397404 EDA2RQ9HAV5 297 aa13.72□□□□□ -0.21
TSPAN4-204ENST00000397404 MUC4Q99102 2169 aa13.72□□□□□ -0.21
TSPAN4-204ENST00000397404 DEFB135Q30KP9 77 aa13.71□□□□□ -0.21
TSPAN4-204ENST00000397404 RNF185Q96GF1 192 aa13.71□□□□□ -0.21
TSPAN4-204ENST00000397404 C18orf15Q96N68 181 aa13.71□□□□□ -0.21
TSPAN4-204ENST00000397404 KIF25-AS1Q9Y6Z4 181 aa13.71□□□□□ -0.21
TSPAN4-204ENST00000397404 X6R8D5 127 aa13.71□□□□□ -0.21
TSPAN4-204ENST00000397404 LYRM9A8MSI8 78 aa13.7□□□□□ -0.22
TSPAN4-204ENST00000397404 H7C1H1 209 aa13.7□□□□□ -0.22
TSPAN4-204ENST00000397404 C14orf178Q8N769 122 aaPredicted RBP13.7□□□□□ -0.22
TSPAN4-204ENST00000397404 OR11H2Q8NH07 326 aa13.7□□□□□ -0.22
TSPAN4-204ENST00000397404 PRELID3AQ96N28 172 aa13.69□□□□□ -0.22
TSPAN4-204ENST00000397404 NBEAL1Q6ZS30 2694 aa13.69□□□□□ -0.22
TSPAN4-204ENST00000397404 PLAC8L1A1L4L8 177 aa13.68□□□□□ -0.22
TSPAN4-204ENST00000397404 D6R8Y8 96 aa13.68□□□□□ -0.22
TSPAN4-204ENST00000397404 RS1O15537 224 aa13.68□□□□□ -0.22
TSPAN4-204ENST00000397404 CRYGDP07320 174 aa13.68□□□□□ -0.22
TSPAN4-204ENST00000397404 KIAA1644Q3SXP7 199 aa13.68□□□□□ -0.22
TSPAN4-204ENST00000397404 TRGV1A0A0A0MS02 117 aa13.67□□□□□ -0.22
TSPAN4-204ENST00000397404 TRAV4A0A0B4J268 109 aa13.67□□□□□ -0.22
TSPAN4-204ENST00000397404 C18orf32Q8TCD1 76 aa13.67□□□□□ -0.22
TSPAN4-204ENST00000397404 PRSS47A8MTI9 375 aa13.67□□□□□ -0.22
TSPAN4-204ENST00000397404 LINC00315P59091 139 aa13.67□□□□□ -0.22
TSPAN4-204ENST00000397404 BAGE3Q86Y29 109 aa13.67□□□□□ -0.22
TSPAN4-204ENST00000397404 C20orf78Q9BR46 151 aa13.67□□□□□ -0.22
TSPAN4-204ENST00000397404 NOP10Q9NPE3 64 aaKnown RBP13.67□□□□□ -0.22
TSPAN4-204ENST00000397404 NOTCH1P46531 2555 aa13.66□□□□□ -0.22
TSPAN4-204ENST00000397404 CFAP126Q5VTH2 177 aa13.66□□□□□ -0.22
TSPAN4-204ENST00000397404 C5orf52A6NGY3 159 aa13.65□□□□□ -0.22
TSPAN4-204ENST00000397404 K7EMI3 77 aa13.65□□□□□ -0.22
TSPAN4-204ENST00000397404 MGPP08493 103 aa13.65□□□□□ -0.22
TSPAN4-204ENST00000397404 ESDP10768 282 aa13.65□□□□□ -0.22
TSPAN4-204ENST00000397404 NDUFA6P56556 154 aa13.65□□□□□ -0.22
TSPAN4-204ENST00000397404 LINC00612Q8N6U2 182 aa13.65□□□□□ -0.22
TSPAN4-204ENST00000397404 OR4C5Q8NGB2 326 aa13.65□□□□□ -0.22
TSPAN4-204ENST00000397404 CHCHD1Q96BP2 118 aaKnown RBP13.65□□□□□ -0.22
TSPAN4-204ENST00000397404 MAP1LC3AQ9H492 121 aa13.65□□□□□ -0.22
TSPAN4-204ENST00000397404 PRM2P04554 102 aa13.64□□□□□ -0.23
TSPAN4-204ENST00000397404 RPL32P62910 135 aaKnown RBP13.64□□□□□ -0.23
TSPAN4-204ENST00000397404 UFSP1Q6NVU6 142 aa13.64□□□□□ -0.23
TSPAN4-204ENST00000397404 NXT2Q9NPJ8 142 aaKnown RBP13.64□□□□□ -0.23
TSPAN4-204ENST00000397404 MRPL16Q9NX20 251 aaKnown RBP13.64□□□□□ -0.23
TSPAN4-204ENST00000397404 A0A087WWL8 130 aa13.63□□□□□ -0.23
TSPAN4-204ENST00000397404 F5H697 171 aa13.63□□□□□ -0.23
TSPAN4-204ENST00000397404 TNFRSF6BO95407 300 aa13.63□□□□□ -0.23
TSPAN4-204ENST00000397404 HOXA5P20719 270 aa13.63□□□□□ -0.23
TSPAN4-204ENST00000397404 ZNF56Q15929 161 aa13.63□□□□□ -0.23
TSPAN4-204ENST00000397404 FAM74A4Q5TZK3 123 aa13.63□□□□□ -0.23
TSPAN4-204ENST00000397404 Q8NAQ8 132 aa13.63□□□□□ -0.23
TSPAN4-204ENST00000397404 TRGV2A0A075B6R0 118 aa13.62□□□□□ -0.23
TSPAN4-204ENST00000397404 K7EIL1 84 aa13.62□□□□□ -0.23
TSPAN4-204ENST00000397404 PMCHP20382 165 aa13.62□□□□□ -0.23
TSPAN4-204ENST00000397404 PACRGQ96M98 296 aaPredicted RBP13.62□□□□□ -0.23
TSPAN4-204ENST00000397404 SPATA25Q9BR10 227 aa13.62□□□□□ -0.23
TSPAN4-204ENST00000397404 C11orf68Q9H3H3 251 aaKnown RBP13.62□□□□□ -0.23
TSPAN4-204ENST00000397404 IGHV4-28A0A0C4DH34 117 aa13.61□□□□□ -0.23
TSPAN4-204ENST00000397404 TRBV6-5A0A0K0K1A5 114 aa13.61□□□□□ -0.23
TSPAN4-204ENST00000397404 TCAPO15273 167 aa13.61□□□□□ -0.23
TSPAN4-204ENST00000397404 IGHV3-53P01767 116 aa13.61□□□□□ -0.23
TSPAN4-204ENST00000397404 Q6ZTI0 123 aa13.61□□□□□ -0.23
TSPAN4-204ENST00000397404 DNAJC30Q96LL9 226 aa13.61□□□□□ -0.23
TSPAN4-204ENST00000397404 JPT2Q9H910 190 aa13.61□□□□□ -0.23
TSPAN4-204ENST00000397404 SNRPEP62304 92 aaKnown RBP13.61□□□□□ -0.23
TSPAN4-204ENST00000397404 SUMO4Q6EEV6 95 aa13.61□□□□□ -0.23
TSPAN4-204ENST00000397404 NRACQ8N912 160 aa13.61□□□□□ -0.23
TSPAN4-204ENST00000397404 PRSS3P2Q8NHM4 247 aa13.61□□□□□ -0.23
TSPAN4-204ENST00000397404 TRBV10-1A0A0K0K1A3 114 aa13.6□□□□□ -0.23
TSPAN4-204ENST00000397404 M0QY20 66 aa13.6□□□□□ -0.23
TSPAN4-204ENST00000397404 LINC00614P0C842 121 aa13.6□□□□□ -0.23
TSPAN4-204ENST00000397404 SPART-AS1P0CW21 52 aa13.6□□□□□ -0.23
TSPAN4-204ENST00000397404 SAMD10Q9BYL1 202 aa13.6□□□□□ -0.23
TSPAN4-204ENST00000397404 NIT2Q9NQR4 276 aa13.6□□□□□ -0.23
TSPAN4-204ENST00000397404 NPYP01303 97 aa13.59□□□□□ -0.23
TSPAN4-204ENST00000397404 S100A2P29034 98 aa13.59□□□□□ -0.23
TSPAN4-204ENST00000397404 SUMO2P61956 95 aaKnown RBP13.59□□□□□ -0.23
TSPAN4-204ENST00000397404 FA2HQ7L5A8 372 aa13.59□□□□□ -0.23
TSPAN4-204ENST00000397404 AP5S1Q9NUS5 200 aa13.59□□□□□ -0.23
TSPAN4-204ENST00000397404 DKK2Q9UBU2 259 aa13.59□□□□□ -0.23
TSPAN4-204ENST00000397404 NCR2O95944 276 aa13.58□□□□□ -0.24
TSPAN4-204ENST00000397404 G0S2P27469 103 aa13.58□□□□□ -0.24
TSPAN4-204ENST00000397404 TM2D3Q9BRN9 247 aa13.58□□□□□ -0.24
TSPAN4-204ENST00000397404 ST20Q9HBF5 79 aa13.58□□□□□ -0.24
TSPAN4-204ENST00000397404 GAGE12BA1L429 117 aa13.57□□□□□ -0.24
TSPAN4-204ENST00000397404 LINC01546A6NGU7 62 aa13.57□□□□□ -0.24
TSPAN4-204ENST00000397404 GAGE7O76087 117 aa13.57□□□□□ -0.24
TSPAN4-204ENST00000397404 GAGE12FP0CL80 117 aa13.57□□□□□ -0.24
TSPAN4-204ENST00000397404 GAGE12GP0CL81 117 aa13.57□□□□□ -0.24
TSPAN4-204ENST00000397404 GAGE12IP0CL82 117 aa13.57□□□□□ -0.24
TSPAN4-204ENST00000397404 DEFB121Q5J5C9 76 aa13.57□□□□□ -0.24
TSPAN4-204ENST00000397404 NIT1Q86X76 327 aa13.57□□□□□ -0.24
TSPAN4-204ENST00000397404 Q8N8P6 123 aa13.57□□□□□ -0.24
TSPAN4-204ENST00000397404 TMEM18Q96B42 140 aa13.57□□□□□ -0.24
TSPAN4-204ENST00000397404 TRAV26-2A0A0B4J265 109 aa13.56□□□□□ -0.24
TSPAN4-204ENST00000397404 TRBV6-4A0A1B0GX49 114 aa13.56□□□□□ -0.24
TSPAN4-204ENST00000397404 LINC01549A6NIU2 74 aa13.56□□□□□ -0.24
TSPAN4-204ENST00000397404 SMKR1H3BMG3 65 aa13.56□□□□□ -0.24
TSPAN4-204ENST00000397404 HSBP1O75506 76 aa13.56□□□□□ -0.24
TSPAN4-204ENST00000397404 SERF1AO75920 110 aa13.56□□□□□ -0.24
TSPAN4-204ENST00000397404 EMP1P54849 157 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms