RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 TSPEAR-AS2P59090 65 aa7.46□□□□□ -1.22
TRIM39-203ENST00000396547 ADORA2A-AS1P86434 159 aa7.46□□□□□ -1.22
TRIM39-203ENST00000396547 TMEM190Q8WZ59 177 aa7.46□□□□□ -1.22
TRIM39-203ENST00000396547 CCDC140Q96MF4 163 aa7.46□□□□□ -1.22
TRIM39-203ENST00000396547 FAM110AQ9BQ89 295 aa7.46□□□□□ -1.22
TRIM39-203ENST00000396547 A0A0J9YY99 117 aa7.45□□□□□ -1.22
TRIM39-203ENST00000396547 IGKV3-20P01619 116 aa7.45□□□□□ -1.22
TRIM39-203ENST00000396547 IGHV3-11P01762 117 aa7.45□□□□□ -1.22
TRIM39-203ENST00000396547 CD7P09564 240 aa7.45□□□□□ -1.22
TRIM39-203ENST00000396547 UBE2D1P51668 147 aa7.45□□□□□ -1.22
TRIM39-203ENST00000396547 Q8N9W7 124 aa7.45□□□□□ -1.22
TRIM39-203ENST00000396547 OR10J6PQ8NGY7 276 aa7.45□□□□□ -1.22
TRIM39-203ENST00000396547 TNFRSF18Q9Y5U5 241 aa7.45□□□□□ -1.22
TRIM39-203ENST00000396547 FLNCQ14315 2725 aa7.45□□□□□ -1.22
TRIM39-203ENST00000396547 SLC25A20O43772 301 aa7.45□□□□□ -1.22
TRIM39-203ENST00000396547 PRSS2P07478 247 aa7.45□□□□□ -1.22
TRIM39-203ENST00000396547 LGALS3P17931 250 aaKnown RBP7.45□□□□□ -1.22
TRIM39-203ENST00000396547 ATP5J2P56134 94 aa7.45□□□□□ -1.22
TRIM39-203ENST00000396547 NPC2P61916 151 aa7.45□□□□□ -1.22
TRIM39-203ENST00000396547 LYRM7Q5U5X0 104 aa7.45□□□□□ -1.22
TRIM39-203ENST00000396547 PRO1854Q9UHT4 67 aa7.45□□□□□ -1.22
TRIM39-203ENST00000396547 A4D1N5 150 aa7.44□□□□□ -1.22
TRIM39-203ENST00000396547 CRYGDP07320 174 aa7.44□□□□□ -1.22
TRIM39-203ENST00000396547 NTN5Q8WTR8 489 aaPredicted RBP7.44□□□□□ -1.22
TRIM39-203ENST00000396547 ERG28Q9UKR5 140 aa7.44□□□□□ -1.22
TRIM39-203ENST00000396547 RBAKDNA6NC62 111 aa7.44□□□□□ -1.22
TRIM39-203ENST00000396547 TRAV21A0A0B4J279 112 aa7.43□□□□□ -1.22
TRIM39-203ENST00000396547 UBE2D3P61077 147 aa7.43□□□□□ -1.22
TRIM39-203ENST00000396547 UBE2D2P62837 147 aa7.43□□□□□ -1.22
TRIM39-203ENST00000396547 LY6G5BQ8NDX9 201 aa7.43□□□□□ -1.22
TRIM39-203ENST00000396547 ATP6V0E2Q8NHE4 81 aa7.43□□□□□ -1.22
TRIM39-203ENST00000396547 EEF1AKMT3Q96AZ1 226 aa7.43□□□□□ -1.22
TRIM39-203ENST00000396547 SNCGO76070 127 aa7.43□□□□□ -1.22
TRIM39-203ENST00000396547 TSHBP01222 138 aa7.43□□□□□ -1.22
TRIM39-203ENST00000396547 TRBV12-3P01733 135 aa7.43□□□□□ -1.22
TRIM39-203ENST00000396547 ZFP36P26651 326 aaKnown RBP7.43□□□□□ -1.22
TRIM39-203ENST00000396547 GAGE2BQ13066 116 aa7.43□□□□□ -1.22
TRIM39-203ENST00000396547 GAGE2EQ4V326 116 aa7.43□□□□□ -1.22
TRIM39-203ENST00000396547 C9orf47Q6ZRZ4 202 aa7.43□□□□□ -1.22
TRIM39-203ENST00000396547 C10orf126Q8N4M7 172 aa7.43□□□□□ -1.22
TRIM39-203ENST00000396547 C3orf56Q8N813 242 aa7.43□□□□□ -1.22
TRIM39-203ENST00000396547 GAGE2DQ9UEU5 116 aa7.43□□□□□ -1.22
TRIM39-203ENST00000396547 DOPEY2Q9Y3R5 2298 aa7.43□□□□□ -1.22
TRIM39-203ENST00000396547 CRYBG3Q68DQ2 2970 aa7.43□□□□□ -1.22
TRIM39-203ENST00000396547 SPG11Q96JI7 2443 aa7.43□□□□□ -1.22
TRIM39-203ENST00000396547 TRAV4A0A0B4J268 109 aa7.43□□□□□ -1.22
TRIM39-203ENST00000396547 CRLF1O75462 422 aa7.43□□□□□ -1.22
TRIM39-203ENST00000396547 COX6B1P14854 86 aa7.43□□□□□ -1.22
TRIM39-203ENST00000396547 TTC32Q5I0X7 151 aa7.43□□□□□ -1.22
TRIM39-203ENST00000396547 UNQ9165/PRO28630Q6UXU0 137 aa7.43□□□□□ -1.22
TRIM39-203ENST00000396547 SMIM20Q8N5G0 67 aa7.43□□□□□ -1.22
TRIM39-203ENST00000396547 TENM4Q6N022 2769 aa7.42□□□□□ -1.22
TRIM39-203ENST00000396547 NOTCH3Q9UM47 2321 aa7.42□□□□□ -1.22
TRIM39-203ENST00000396547 J3QQQ9 107 aa7.42□□□□□ -1.22
TRIM39-203ENST00000396547 IGHV3-30P01768 117 aa7.42□□□□□ -1.22
TRIM39-203ENST00000396547 IGHV3-30-5P0DP03 117 aa7.42□□□□□ -1.22
TRIM39-203ENST00000396547 PMVKQ15126 192 aa7.42□□□□□ -1.22
TRIM39-203ENST00000396547 FAM110DQ8TAY7 271 aaPredicted RBP7.42□□□□□ -1.22
TRIM39-203ENST00000396547 AJUBAQ96IF1 538 aa7.42□□□□□ -1.22
TRIM39-203ENST00000396547 UBTD1Q9HAC8 227 aa7.42□□□□□ -1.22
TRIM39-203ENST00000396547 ZNF462Q96JM2 2506 aa7.42□□□□□ -1.22
TRIM39-203ENST00000396547 IGLV4-69A0A075B6H9 119 aa7.42□□□□□ -1.22
TRIM39-203ENST00000396547 ZNRF2Q8NHG8 242 aa7.42□□□□□ -1.22
TRIM39-203ENST00000396547 ZNF580Q9UK33 172 aa7.42□□□□□ -1.22
TRIM39-203ENST00000396547 ZFHX3Q15911 3703 aa7.42□□□□□ -1.22
TRIM39-203ENST00000396547 ODF3BA8MYP8 253 aa7.41□□□□□ -1.22
TRIM39-203ENST00000396547 GAGE5Q13069 117 aa7.41□□□□□ -1.22
TRIM39-203ENST00000396547 GAGE6Q13070 117 aa7.41□□□□□ -1.22
TRIM39-203ENST00000396547 MUSTN1Q8IVN3 82 aa7.41□□□□□ -1.22
TRIM39-203ENST00000396547 ZFAND2AQ8N6M9 145 aa7.41□□□□□ -1.22
TRIM39-203ENST00000396547 SPXQ9BT56 116 aa7.41□□□□□ -1.22
TRIM39-203ENST00000396547 TEX49A0A1B0GTD5 131 aa7.41□□□□□ -1.22
TRIM39-203ENST00000396547 ELANEP08246 267 aa7.41□□□□□ -1.22
TRIM39-203ENST00000396547 HTN1P15515 57 aa7.41□□□□□ -1.22
TRIM39-203ENST00000396547 LINC00477Q96M19 166 aa7.41□□□□□ -1.22
TRIM39-203ENST00000396547 NACAE9PAV3 2078 aa7.41□□□□□ -1.22
TRIM39-203ENST00000396547 MYO18BQ8IUG5 2567 aa7.41□□□□□ -1.22
TRIM39-203ENST00000396547 TRAV12-3A0A0B4J271 114 aa7.41□□□□□ -1.22
TRIM39-203ENST00000396547 SDHAF1A6NFY7 115 aa7.41□□□□□ -1.22
TRIM39-203ENST00000396547 RNF223E7ERA6 249 aa7.41□□□□□ -1.22
TRIM39-203ENST00000396547 CCL21O00585 134 aa7.41□□□□□ -1.22
TRIM39-203ENST00000396547 GPHB5Q86YW7 130 aa7.41□□□□□ -1.22
TRIM39-203ENST00000396547 HIVEP3Q5T1R4 2406 aa7.4□□□□□ -1.22
TRIM39-203ENST00000396547 IGHV4-4A0A075B6R2 117 aa7.4□□□□□ -1.22
TRIM39-203ENST00000396547 LINC01619G3V211 115 aa7.4□□□□□ -1.22
TRIM39-203ENST00000396547 CCDC179H3BU77 68 aa7.4□□□□□ -1.22
TRIM39-203ENST00000396547 SAA4P35542 130 aa7.4□□□□□ -1.22
TRIM39-203ENST00000396547 ZNF56Q15929 161 aa7.4□□□□□ -1.22
TRIM39-203ENST00000396547 RNASE13Q5GAN3 156 aaKnown RBP7.4□□□□□ -1.22
TRIM39-203ENST00000396547 SLC25A29Q8N8R3 303 aa7.4□□□□□ -1.22
TRIM39-203ENST00000396547 MUC4Q99102 2169 aa7.4□□□□□ -1.23
TRIM39-203ENST00000396547 M0R1W7 72 aa7.4□□□□□ -1.23
TRIM39-203ENST00000396547 SUMO4Q6EEV6 95 aa7.4□□□□□ -1.23
TRIM39-203ENST00000396547 Q8N6K4 173 aa7.4□□□□□ -1.23
TRIM39-203ENST00000396547 TMEM262E9PQX1 116 aa7.39□□□□□ -1.23
TRIM39-203ENST00000396547 RNASE3P12724 160 aaKnown RBP7.39□□□□□ -1.23
TRIM39-203ENST00000396547 LY6EQ16553 131 aa7.39□□□□□ -1.23
TRIM39-203ENST00000396547 FAM159AQ6UWV7 190 aa7.39□□□□□ -1.23
TRIM39-203ENST00000396547 CSMD2Q7Z408 3487 aa7.39□□□□□ -1.23
TRIM39-203ENST00000396547 CDSNQ15517 529 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms