RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 HLA-DRB4P13762 266 aa6.28□□□□□ -1.4
LIMS1-203ENST00000393310 C22orf34Q6ZV56 151 aa6.28□□□□□ -1.4
LIMS1-203ENST00000393310 TMEM252Q8N6L7 170 aa6.28□□□□□ -1.4
LIMS1-203ENST00000393310 YPEL4Q96NS1 127 aa6.28□□□□□ -1.4
LIMS1-203ENST00000393310 FANCD2OSQ96PS1 177 aa6.28□□□□□ -1.4
LIMS1-203ENST00000393310 YPEL2Q96QA6 119 aa6.28□□□□□ -1.4
LIMS1-203ENST00000393310 ANAPC10Q9UM13 185 aa6.28□□□□□ -1.4
LIMS1-203ENST00000393310 HLA-DRB4X5D2U9 266 aa6.28□□□□□ -1.4
LIMS1-203ENST00000393310 DMXL2Q8TDJ6 3036 aa6.28□□□□□ -1.4
LIMS1-203ENST00000393310 AVPP01185 164 aa6.28□□□□□ -1.4
LIMS1-203ENST00000393310 CTSZQ9UBR2 303 aa6.28□□□□□ -1.4
LIMS1-203ENST00000393310 ADGRG4Q8IZF6 3080 aa6.28□□□□□ -1.4
LIMS1-203ENST00000393310 COX7A2P2O60397 106 aa6.27□□□□□ -1.4
LIMS1-203ENST00000393310 IGFBP3P17936 291 aaPredicted RBP6.27□□□□□ -1.4
LIMS1-203ENST00000393310 ABHD14BQ96IU4 210 aa6.27□□□□□ -1.4
LIMS1-203ENST00000393310 ZNF137PP52743 207 aa6.27□□□□□ -1.41
LIMS1-203ENST00000393310 SPATA12Q7Z6I5 190 aa6.27□□□□□ -1.41
LIMS1-203ENST00000393310 SERP2Q8N6R1 65 aa6.27□□□□□ -1.41
LIMS1-203ENST00000393310 VSIG2Q96IQ7 327 aa6.27□□□□□ -1.41
LIMS1-203ENST00000393310 TRAV1-1A0A0B4J248 108 aa6.27□□□□□ -1.41
LIMS1-203ENST00000393310 MYMXA0A1B0GTQ4 84 aa6.27□□□□□ -1.41
LIMS1-203ENST00000393310 CTRLP40313 264 aa6.27□□□□□ -1.41
LIMS1-203ENST00000393310 ZNF138P52744 262 aa6.27□□□□□ -1.41
LIMS1-203ENST00000393310 CCL20P78556 96 aa6.27□□□□□ -1.41
LIMS1-203ENST00000393310 CLEC19AQ6UXS0 136 aa6.27□□□□□ -1.41
LIMS1-203ENST00000393310 ARFGEF3Q5TH69 2177 aa6.27□□□□□ -1.41
LIMS1-203ENST00000393310 IZUMO1RA6ND01 250 aa6.27□□□□□ -1.41
LIMS1-203ENST00000393310 UBE2AP49459 152 aa6.27□□□□□ -1.41
LIMS1-203ENST00000393310 ASPHD1Q5U4P2 390 aa6.27□□□□□ -1.41
LIMS1-203ENST00000393310 FAM222AQ5U5X8 452 aa6.27□□□□□ -1.41
LIMS1-203ENST00000393310 LGALS9CQ6DKI2 356 aa6.27□□□□□ -1.41
LIMS1-203ENST00000393310 SLC25A48Q6ZT89 311 aaKnown RBP6.27□□□□□ -1.41
LIMS1-203ENST00000393310 TM2D1Q9BX74 207 aa6.27□□□□□ -1.41
LIMS1-203ENST00000393310 ARHGAP21Q5T5U3 1957 aa6.26□□□□□ -1.41
LIMS1-203ENST00000393310 TRAV21A0A0B4J279 112 aa6.26□□□□□ -1.41
LIMS1-203ENST00000393310 APOHP02749 345 aaPredicted RBP6.26□□□□□ -1.41
LIMS1-203ENST00000393310 IAPPP10997 89 aa6.26□□□□□ -1.41
LIMS1-203ENST00000393310 LINC01549A6NIU2 74 aa6.26□□□□□ -1.41
LIMS1-203ENST00000393310 TPSG1Q9NRR2 321 aa6.26□□□□□ -1.41
LIMS1-203ENST00000393310 HEATR5AQ86XA9 2040 aa6.26□□□□□ -1.41
LIMS1-203ENST00000393310 PAX4O43316 350 aa6.26□□□□□ -1.41
LIMS1-203ENST00000393310 LGALS9BQ3B8N2 356 aa6.26□□□□□ -1.41
LIMS1-203ENST00000393310 SP6Q3SY56 376 aa6.26□□□□□ -1.41
LIMS1-203ENST00000393310 PRSS2P07478 247 aa6.25□□□□□ -1.41
LIMS1-203ENST00000393310 RPS11P62280 158 aaKnown RBP eCLIP6.25□□□□□ -1.41
LIMS1-203ENST00000393310 TMEM14BQ9NUH8 114 aa6.25□□□□□ -1.41
LIMS1-203ENST00000393310 RPL18AQ02543 176 aaKnown RBP6.25□□□□□ -1.41
LIMS1-203ENST00000393310 GTSF1Q8WW33 167 aa6.25□□□□□ -1.41
LIMS1-203ENST00000393310 PLA2G2EQ9NZK7 142 aa6.25□□□□□ -1.41
LIMS1-203ENST00000393310 MDFICQ9P1T7 246 aa6.25□□□□□ -1.41
LIMS1-203ENST00000393310 IGKV1D-17A0A075B6S4 117 aa6.25□□□□□ -1.41
LIMS1-203ENST00000393310 IGF1P05019 195 aa6.25□□□□□ -1.41
LIMS1-203ENST00000393310 ZNF645Q8N7E2 425 aa6.25□□□□□ -1.41
LIMS1-203ENST00000393310 SRSF12Q8WXF0 261 aaKnown RBP6.25□□□□□ -1.41
LIMS1-203ENST00000393310 Q9UF83 564 aa6.25□□□□□ -1.41
LIMS1-203ENST00000393310 LOC389332A0A1B0GUA5 103 aa6.25□□□□□ -1.41
LIMS1-203ENST00000393310 IGF2BP2-AS1Q96M15 143 aa6.25□□□□□ -1.41
LIMS1-203ENST00000393310 CDIP1Q9H305 208 aa6.25□□□□□ -1.41
LIMS1-203ENST00000393310 SCRT2Q9NQ03 307 aa6.25□□□□□ -1.41
LIMS1-203ENST00000393310 NOTCH1P46531 2555 aa6.24□□□□□ -1.41
LIMS1-203ENST00000393310 FAM229AH3BQW9 127 aa6.24□□□□□ -1.41
LIMS1-203ENST00000393310 ATP6V0E1O15342 81 aa6.24□□□□□ -1.41
LIMS1-203ENST00000393310 DCHS2Q6V1P9 2916 aa6.24□□□□□ -1.41
LIMS1-203ENST00000393310 A0A0B4J2C4 111 aa6.24□□□□□ -1.41
LIMS1-203ENST00000393310 LCE6AA0A183 80 aa6.24□□□□□ -1.41
LIMS1-203ENST00000393310 ZNF134P52741 427 aa6.24□□□□□ -1.41
LIMS1-203ENST00000393310 IFI27L1Q96BM0 104 aa6.24□□□□□ -1.41
LIMS1-203ENST00000393310 PRR13Q9NZ81 148 aa6.24□□□□□ -1.41
LIMS1-203ENST00000393310 H0YIZ8 118 aa6.24□□□□□ -1.41
LIMS1-203ENST00000393310 PRB3Q04118 309 aaPredicted RBP6.24□□□□□ -1.41
LIMS1-203ENST00000393310 CEMP1Q6PRD7 247 aaPredicted RBP6.24□□□□□ -1.41
LIMS1-203ENST00000393310 PHLDA1Q8WV24 401 aaPredicted RBP6.24□□□□□ -1.41
LIMS1-203ENST00000393310 SLC25A38Q96DW6 304 aa6.24□□□□□ -1.41
LIMS1-203ENST00000393310 TRAV8-3A0A0A6YYJ7 113 aa6.23□□□□□ -1.41
LIMS1-203ENST00000393310 HBDP02042 147 aa6.23□□□□□ -1.41
LIMS1-203ENST00000393310 LINC01561Q8N1V8 128 aa6.23□□□□□ -1.41
LIMS1-203ENST00000393310 C5orf56Q8N8D9 126 aa6.23□□□□□ -1.41
LIMS1-203ENST00000393310 TET2Q6N021 2002 aaPredicted RBP6.23□□□□□ -1.41
LIMS1-203ENST00000393310 COL6A5A8TX70 2615 aa6.23□□□□□ -1.41
LIMS1-203ENST00000393310 TRGV2A0A075B6R0 118 aa6.23□□□□□ -1.41
LIMS1-203ENST00000393310 IGHV4-30-4P0DP06 118 aa6.23□□□□□ -1.41
LIMS1-203ENST00000393310 HMGA2P52926 109 aa6.23□□□□□ -1.41
LIMS1-203ENST00000393310 C20orf197Q8N268 126 aa6.23□□□□□ -1.41
LIMS1-203ENST00000393310 FAM90A26D6RGX4 464 aa6.23□□□□□ -1.41
LIMS1-203ENST00000393310 CGB3P0DN86 165 aa6.23□□□□□ -1.41
LIMS1-203ENST00000393310 C1orf134Q5TEV5 83 aa6.23□□□□□ -1.41
LIMS1-203ENST00000393310 Q6ZPA2 131 aa6.23□□□□□ -1.41
LIMS1-203ENST00000393310 CD177Q8N6Q3 437 aa6.23□□□□□ -1.41
LIMS1-203ENST00000393310 LYZL4Q96KX0 146 aa6.23□□□□□ -1.41
LIMS1-203ENST00000393310 NUP214P35658 2090 aaPredicted RBP6.23□□□□□ -1.41
LIMS1-203ENST00000393310 TRAV3A0A0B4J244 114 aa6.22□□□□□ -1.41
LIMS1-203ENST00000393310 E9PLD3 99 aa6.22□□□□□ -1.41
LIMS1-203ENST00000393310 NDUFC1O43677 76 aa6.22□□□□□ -1.41
LIMS1-203ENST00000393310 LHBP01229 141 aa6.22□□□□□ -1.41
LIMS1-203ENST00000393310 MIC13Q5XKP0 118 aa6.22□□□□□ -1.41
LIMS1-203ENST00000393310 DOCK11Q5JSL3 2073 aa6.22□□□□□ -1.41
LIMS1-203ENST00000393310 A0A096LNT2 108 aa6.22□□□□□ -1.41
LIMS1-203ENST00000393310 TMEM256-PLSCR3K7ERE1 68 aa6.22□□□□□ -1.41
LIMS1-203ENST00000393310 MIFP14174 115 aa6.22□□□□□ -1.41
LIMS1-203ENST00000393310 F8W735 103 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms