RNA–Protein interactions for RNA: ENST00000392407.6

MUC4-205, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,645 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-205ENST00000392407 TRBV7-1A0A0A6YYK4 115 aa8.85□□□□□ -0.99
MUC4-205ENST00000392407 ODF3BA8MYP8 253 aa8.85□□□□□ -0.99
MUC4-205ENST00000392407 COX6B1P14854 86 aa8.85□□□□□ -0.99
MUC4-205ENST00000392407 IFITM1P13164 125 aa8.85□□□□□ -0.99
MUC4-205ENST00000392407 MINOS1Q5TGZ0 78 aa8.85□□□□□ -0.99
MUC4-205ENST00000392407 MINOS1-NBL1R4GNA1 71 aa8.85□□□□□ -0.99
MUC4-205ENST00000392407 TNRC18O15417 2968 aaPredicted RBP8.85□□□□□ -0.99
MUC4-205ENST00000392407 TRAV4A0A0B4J268 109 aa8.85□□□□□ -0.99
MUC4-205ENST00000392407 OOSP1A8MZH6 123 aa8.85□□□□□ -0.99
MUC4-205ENST00000392407 PIP4P1Q86T03 277 aa8.85□□□□□ -0.99
MUC4-205ENST00000392407 MUSTN1Q8IVN3 82 aa8.85□□□□□ -0.99
MUC4-205ENST00000392407 UBTD1Q9HAC8 227 aa8.85□□□□□ -0.99
MUC4-205ENST00000392407 C2orf82Q6UX34 121 aa8.84□□□□□ -0.99
MUC4-205ENST00000392407 ZFAND2AQ8N6M9 145 aa8.84□□□□□ -0.99
MUC4-205ENST00000392407 C15orf53Q8NAA6 179 aa8.84□□□□□ -0.99
MUC4-205ENST00000392407 IGHV1-69DA0A0B4J2H0 117 aa8.84□□□□□ -0.99
MUC4-205ENST00000392407 SUMO4Q6EEV6 95 aa8.84□□□□□ -0.99
MUC4-205ENST00000392407 TMEM141Q96I45 108 aa8.84□□□□□ -0.99
MUC4-205ENST00000392407 IGLV4-69A0A075B6H9 119 aa8.84□□□□□ -1
MUC4-205ENST00000392407 TRAV12-3A0A0B4J271 114 aa8.84□□□□□ -1
MUC4-205ENST00000392407 CRYGDP07320 174 aa8.84□□□□□ -1
MUC4-205ENST00000392407 SAA4P35542 130 aa8.84□□□□□ -1
MUC4-205ENST00000392407 NDUFV3P56181 108 aaKnown RBP8.84□□□□□ -1
MUC4-205ENST00000392407 Q8N1Y9 231 aa8.84□□□□□ -1
MUC4-205ENST00000392407 SMIM20Q8N5G0 67 aa8.84□□□□□ -1
MUC4-205ENST00000392407 TEX49A0A1B0GTD5 131 aa8.83□□□□□ -1
MUC4-205ENST00000392407 COX6CP09669 75 aa8.83□□□□□ -1
MUC4-205ENST00000392407 HTN1P15515 57 aa8.83□□□□□ -1
MUC4-205ENST00000392407 LINC01620Q4KN68 170 aa8.83□□□□□ -1
MUC4-205ENST00000392407 SPXQ9BT56 116 aa8.83□□□□□ -1
MUC4-205ENST00000392407 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.82□□□□□ -1
MUC4-205ENST00000392407 H3BMM0 161 aa8.82□□□□□ -1
MUC4-205ENST00000392407 PF4V1P10720 104 aa8.82□□□□□ -1
MUC4-205ENST00000392407 UBE2WQ96B02 151 aa8.82□□□□□ -1
MUC4-205ENST00000392407 PRO3102Q9H379 93 aa8.82□□□□□ -1
MUC4-205ENST00000392407 LENEPQ9Y5L5 61 aa8.82□□□□□ -1
MUC4-205ENST00000392407 NOTCH3Q9UM47 2321 aa8.82□□□□□ -1
MUC4-205ENST00000392407 IGHV3-33P01772 117 aa8.82□□□□□ -1
MUC4-205ENST00000392407 ZNRF2Q8NHG8 242 aa8.82□□□□□ -1
MUC4-205ENST00000392407 TRAV41A0A0B4J266 112 aa8.82□□□□□ -1
MUC4-205ENST00000392407 CCDC179H3BU77 68 aa8.82□□□□□ -1
MUC4-205ENST00000392407 UNQ9165/PRO28630Q6UXU0 137 aa8.82□□□□□ -1
MUC4-205ENST00000392407 Q8N6K4 173 aa8.82□□□□□ -1
MUC4-205ENST00000392407 CEP295Q9C0D2 2601 aa8.82□□□□□ -1
MUC4-205ENST00000392407 CCL21O00585 134 aa8.81□□□□□ -1
MUC4-205ENST00000392407 CRLF1O75462 422 aa8.81□□□□□ -1
MUC4-205ENST00000392407 TSHBP01222 138 aa8.81□□□□□ -1
MUC4-205ENST00000392407 AJUBAQ96IF1 538 aa8.81□□□□□ -1
MUC4-205ENST00000392407 A0A0J9YXV3 536 aa8.81□□□□□ -1
MUC4-205ENST00000392407 ZFP36P26651 326 aaKnown RBP8.81□□□□□ -1
MUC4-205ENST00000392407 RNASE3P12724 160 aaKnown RBP8.8□□□□□ -1
MUC4-205ENST00000392407 LY6EQ16553 131 aa8.8□□□□□ -1
MUC4-205ENST00000392407 C3orf56Q8N813 242 aa8.8□□□□□ -1
MUC4-205ENST00000392407 ATMQ13315 3056 aa8.8□□□□□ -1
MUC4-205ENST00000392407 IGIPA6NJ69 53 aa8.8□□□□□ -1
MUC4-205ENST00000392407 M0R2P5 195 aa8.8□□□□□ -1
MUC4-205ENST00000392407 RHODO00212 210 aa8.8□□□□□ -1
MUC4-205ENST00000392407 TRBV12-3P01733 135 aa8.8□□□□□ -1
MUC4-205ENST00000392407 GPHB5Q86YW7 130 aa8.8□□□□□ -1
MUC4-205ENST00000392407 TIMM17AQ99595 171 aa8.8□□□□□ -1
MUC4-205ENST00000392407 RPL13AP40429 203 aaKnown RBP8.8□□□□□ -1
MUC4-205ENST00000392407 CSMD1Q96PZ7 3565 aa8.79□□□□□ -1
MUC4-205ENST00000392407 LEPROTO15243 131 aa8.79□□□□□ -1
MUC4-205ENST00000392407 RHPN1-AS1Q9BWJ2 59 aa8.79□□□□□ -1
MUC4-205ENST00000392407 DOPEY2Q9Y3R5 2298 aa8.79□□□□□ -1
MUC4-205ENST00000392407 CD28P10747 220 aa8.79□□□□□ -1
MUC4-205ENST00000392407 ZNF876PQ49A33 203 aa8.79□□□□□ -1
MUC4-205ENST00000392407 ATRXP46100 2492 aa8.79□□□□□ -1
MUC4-205ENST00000392407 LRBAP50851 2863 aa8.78□□□□□ -1
MUC4-205ENST00000392407 DMXL1Q9Y485 3027 aa8.78□□□□□ -1
MUC4-205ENST00000392407 EBI3Q14213 229 aa8.78□□□□□ -1
MUC4-205ENST00000392407 RNASE13Q5GAN3 156 aaKnown RBP8.78□□□□□ -1
MUC4-205ENST00000392407 TIMM21Q9BVV7 248 aa8.78□□□□□ -1
MUC4-205ENST00000392407 SPG11Q96JI7 2443 aa8.78□□□□□ -1
MUC4-205ENST00000392407 Q8NA96 180 aa8.78□□□□□ -1
MUC4-205ENST00000392407 TRAV12-2A0A075B6T6 113 aa8.78□□□□□ -1
MUC4-205ENST00000392407 IGHV3-73A0A0B4J1V6 119 aa8.78□□□□□ -1
MUC4-205ENST00000392407 HERV-K104P63124 156 aa8.78□□□□□ -1
MUC4-205ENST00000392407 MEIG1Q5JSS6 88 aa8.78□□□□□ -1
MUC4-205ENST00000392407 TMEM263Q8WUH6 116 aaKnown RBP8.78□□□□□ -1
MUC4-205ENST00000392407 LAMA5O15230 3695 aa8.77□□□□□ -1.01
MUC4-205ENST00000392407 ID1P41134 155 aa8.77□□□□□ -1.01
MUC4-205ENST00000392407 SBSPONQ8IVN8 264 aa8.77□□□□□ -1.01
MUC4-205ENST00000392407 CITED1Q99966 193 aa8.77□□□□□ -1.01
MUC4-205ENST00000392407 TRAV8-3A0A0A6YYJ7 113 aa8.77□□□□□ -1.01
MUC4-205ENST00000392407 RNF223E7ERA6 249 aa8.77□□□□□ -1.01
MUC4-205ENST00000392407 ELANEP08246 267 aa8.77□□□□□ -1.01
MUC4-205ENST00000392407 UBE2E1P51965 193 aa8.77□□□□□ -1.01
MUC4-205ENST00000392407 POLR2KP53803 58 aaKnown RBP8.77□□□□□ -1.01
MUC4-205ENST00000392407 ITLN2Q8WWU7 325 aaPredicted RBP8.77□□□□□ -1.01
MUC4-205ENST00000392407 DUX3Q96PT4 197 aa8.77□□□□□ -1.01
MUC4-205ENST00000392407 PTPRQQ9UMZ3 2332 aa8.77□□□□□ -1.01
MUC4-205ENST00000392407 TRBV10-2A0A0K0K1G8 114 aa8.76□□□□□ -1.01
MUC4-205ENST00000392407 TRIAP1O43715 76 aa8.76□□□□□ -1.01
MUC4-205ENST00000392407 FOXC1Q12948 553 aa8.76□□□□□ -1.01
MUC4-205ENST00000392407 ZNF580Q9UK33 172 aa8.76□□□□□ -1.01
MUC4-205ENST00000392407 SPENQ96T58 3664 aaKnown RBP8.76□□□□□ -1.01
MUC4-205ENST00000392407 A0A0B4J2C4 111 aa8.76□□□□□ -1.01
MUC4-205ENST00000392407 CENPVL3A0A0U1RRI6 287 aa8.76□□□□□ -1.01
MUC4-205ENST00000392407 CLEC2BQ92478 149 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms