RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 SCXQ7RTU7 201 aa4.58□□□□□ -1.68
RFX3-204ENST00000382004 COX7BP24311 80 aa4.58□□□□□ -1.68
RFX3-204ENST00000382004 IL15RAQ13261 267 aa4.58□□□□□ -1.68
RFX3-204ENST00000382004 Q8TCH9 128 aa4.58□□□□□ -1.68
RFX3-204ENST00000382004 MIR7-3HGQ8N6C7 128 aa4.57□□□□□ -1.68
RFX3-204ENST00000382004 DENND4AQ7Z401 1863 aa4.57□□□□□ -1.68
RFX3-204ENST00000382004 MED12LQ86YW9 2145 aa4.57□□□□□ -1.68
RFX3-204ENST00000382004 TRBV7-3A0A075B6L6 115 aa4.57□□□□□ -1.68
RFX3-204ENST00000382004 Q6ZR03 302 aa4.57□□□□□ -1.68
RFX3-204ENST00000382004 LINC00173Q6ZV60 143 aa4.57□□□□□ -1.68
RFX3-204ENST00000382004 K7ENP7 123 aa4.57□□□□□ -1.68
RFX3-204ENST00000382004 DEFB135Q30KP9 77 aa4.57□□□□□ -1.68
RFX3-204ENST00000382004 TEX49A0A1B0GTD5 131 aa4.57□□□□□ -1.68
RFX3-204ENST00000382004 FAM240AA0A1B0GVK7 77 aa4.57□□□□□ -1.68
RFX3-204ENST00000382004 FXYD2P54710 66 aa4.57□□□□□ -1.68
RFX3-204ENST00000382004 H3BUA1 57 aa4.56□□□□□ -1.68
RFX3-204ENST00000382004 ADAMTS7Q9UKP4 1686 aa4.56□□□□□ -1.68
RFX3-204ENST00000382004 TRAV26-1A0A087WT03 109 aa4.56□□□□□ -1.68
RFX3-204ENST00000382004 Q6ZUT4 128 aa4.56□□□□□ -1.68
RFX3-204ENST00000382004 LINC00311Q8N616 119 aa4.56□□□□□ -1.68
RFX3-204ENST00000382004 KIR2DL5BA0A0G2JN68 375 aa4.56□□□□□ -1.68
RFX3-204ENST00000382004 KIR2DL5BA0A0G2JPC4 375 aa4.56□□□□□ -1.68
RFX3-204ENST00000382004 CDPF1Q6NVV7 123 aa4.56□□□□□ -1.68
RFX3-204ENST00000382004 KIR2DL5AQ8N109 375 aa4.56□□□□□ -1.68
RFX3-204ENST00000382004 C20orf197Q8N268 126 aa4.56□□□□□ -1.68
RFX3-204ENST00000382004 SIPA1L3O60292 1781 aaPredicted RBP4.56□□□□□ -1.68
RFX3-204ENST00000382004 IGHV2-5P01817 119 aa4.56□□□□□ -1.68
RFX3-204ENST00000382004 C15orf65H3BRN8 121 aa4.56□□□□□ -1.68
RFX3-204ENST00000382004 MSRB1Q9NZV6 116 aa4.56□□□□□ -1.68
RFX3-204ENST00000382004 Q8N1Y9 231 aa4.55□□□□□ -1.68
RFX3-204ENST00000382004 MUC4Q99102 2169 aa4.55□□□□□ -1.68
RFX3-204ENST00000382004 IGHV4-30-4P0DP06 118 aa4.55□□□□□ -1.68
RFX3-204ENST00000382004 IGHV4-31P0DP07 118 aa4.55□□□□□ -1.68
RFX3-204ENST00000382004 SDIM1Q6ZPB5 146 aa4.55□□□□□ -1.68
RFX3-204ENST00000382004 AJUBAQ96IF1 538 aa4.55□□□□□ -1.68
RFX3-204ENST00000382004 RNF152Q8N8N0 203 aa4.55□□□□□ -1.68
RFX3-204ENST00000382004 V9GYY9 64 aa4.55□□□□□ -1.68
RFX3-204ENST00000382004 NBASA2RRP1 2371 aa4.55□□□□□ -1.68
RFX3-204ENST00000382004 TICRRQ7Z2Z1 1910 aa4.55□□□□□ -1.68
RFX3-204ENST00000382004 A0A087WZ39 114 aa4.55□□□□□ -1.68
RFX3-204ENST00000382004 A6NED7 52 aa4.55□□□□□ -1.68
RFX3-204ENST00000382004 CXCL5P42830 114 aa4.55□□□□□ -1.68
RFX3-204ENST00000382004 SERP1Q9Y6X1 66 aa4.55□□□□□ -1.68
RFX3-204ENST00000382004 MED13LQ71F56 2210 aa4.55□□□□□ -1.68
RFX3-204ENST00000382004 NDUFC2-KCTD14E9PQ53 114 aa4.55□□□□□ -1.68
RFX3-204ENST00000382004 G3V4G9 280 aa4.55□□□□□ -1.68
RFX3-204ENST00000382004 HIST2H2BDQ6DRA6 164 aa4.55□□□□□ -1.68
RFX3-204ENST00000382004 FOXL2NBQ6ZUU3 175 aa4.55□□□□□ -1.68
RFX3-204ENST00000382004 PTH2Q96A98 100 aa4.55□□□□□ -1.68
RFX3-204ENST00000382004 FAM236DA0A1B0GTK5 79 aa4.55□□□□□ -1.68
RFX3-204ENST00000382004 FAM236CP0DP71 79 aa4.55□□□□□ -1.68
RFX3-204ENST00000382004 TTTY13Q9BZ97 58 aa4.55□□□□□ -1.68
RFX3-204ENST00000382004 LENEPQ9Y5L5 61 aa4.55□□□□□ -1.68
RFX3-204ENST00000382004 IGKV1D-37A0A075B6S9 117 aa4.54□□□□□ -1.68
RFX3-204ENST00000382004 IGHV4-38-2P0DP08 117 aa4.54□□□□□ -1.68
RFX3-204ENST00000382004 FAM19A1Q7Z5A9 133 aa4.54□□□□□ -1.68
RFX3-204ENST00000382004 TMEM263Q8WUH6 116 aaKnown RBP4.54□□□□□ -1.68
RFX3-204ENST00000382004 SIRPDQ9H106 197 aa4.54□□□□□ -1.68
RFX3-204ENST00000382004 IGKV1-17P01599 117 aa4.54□□□□□ -1.68
RFX3-204ENST00000382004 FREM1Q5H8C1 2179 aa4.54□□□□□ -1.68
RFX3-204ENST00000382004 MALRD1Q5VYJ5 2156 aa4.54□□□□□ -1.68
RFX3-204ENST00000382004 LRRC37AA6NMS7 1700 aa4.54□□□□□ -1.68
RFX3-204ENST00000382004 Q8N9W7 124 aa4.54□□□□□ -1.68
RFX3-204ENST00000382004 NDUFV3P56181 108 aaKnown RBP4.54□□□□□ -1.68
RFX3-204ENST00000382004 A0A0G2JMZ2 1700 aa4.54□□□□□ -1.68
RFX3-204ENST00000382004 LRRC37A2A6NM11 1700 aa4.54□□□□□ -1.68
RFX3-204ENST00000382004 C16orf54Q6UWD8 224 aa4.54□□□□□ -1.68
RFX3-204ENST00000382004 PRSS33Q8NF86 280 aa4.54□□□□□ -1.68
RFX3-204ENST00000382004 CACNA1HO95180 2353 aa4.54□□□□□ -1.68
RFX3-204ENST00000382004 PDE6GP18545 87 aa4.54□□□□□ -1.68
RFX3-204ENST00000382004 HRCT1Q6UXD1 115 aa4.54□□□□□ -1.68
RFX3-204ENST00000382004 NRXN2Q9P2S2 1712 aa4.54□□□□□ -1.68
RFX3-204ENST00000382004 COL18A1P39060 1754 aa4.54□□□□□ -1.68
RFX3-204ENST00000382004 COL11A2P13942 1736 aaPredicted RBP4.54□□□□□ -1.68
RFX3-204ENST00000382004 BLCAPP62952 87 aa4.54□□□□□ -1.68
RFX3-204ENST00000382004 SPINK6Q6UWN8 80 aa4.54□□□□□ -1.68
RFX3-204ENST00000382004 LOXL1Q08397 574 aaPredicted RBP4.53□□□□□ -1.68
RFX3-204ENST00000382004 NFE4Q86UQ8 179 aa4.53□□□□□ -1.68
RFX3-204ENST00000382004 TOMM6Q96B49 74 aa4.53□□□□□ -1.68
RFX3-204ENST00000382004 TDRG1Q3Y452 100 aa4.53□□□□□ -1.68
RFX3-204ENST00000382004 KIR2DL5BQ8NHK3 375 aa4.53□□□□□ -1.68
RFX3-204ENST00000382004 LYPD6BQ8NI32 183 aa4.53□□□□□ -1.68
RFX3-204ENST00000382004 CENPVL3A0A0U1RRI6 287 aa4.53□□□□□ -1.68
RFX3-204ENST00000382004 ENHOQ6UWT2 76 aa4.53□□□□□ -1.68
RFX3-204ENST00000382004 LINC00643Q86TS7 51 aa4.53□□□□□ -1.68
RFX3-204ENST00000382004 NCOA6Q14686 2063 aaPredicted RBP4.53□□□□□ -1.68
RFX3-204ENST00000382004 PLXNB1O43157 2135 aa4.53□□□□□ -1.68
RFX3-204ENST00000382004 ZNF503-AS2A6NEH8 195 aa4.53□□□□□ -1.68
RFX3-204ENST00000382004 H3BT86 120 aa4.53□□□□□ -1.68
RFX3-204ENST00000382004 DEFB113Q30KQ7 82 aa4.53□□□□□ -1.68
RFX3-204ENST00000382004 GREB1LQ9C091 1923 aaPredicted RBP4.53□□□□□ -1.68
RFX3-204ENST00000382004 E9PLD3 99 aa4.53□□□□□ -1.68
RFX3-204ENST00000382004 C14orf177Q52M58 125 aa4.53□□□□□ -1.68
RFX3-204ENST00000382004 OBSL1O75147 1896 aa4.53□□□□□ -1.69
RFX3-204ENST00000382004 TNS1Q9HBL0 1735 aaKnown RBP4.52□□□□□ -1.69
RFX3-204ENST00000382004 RNASE8Q8TDE3 154 aaKnown RBP4.52□□□□□ -1.69
RFX3-204ENST00000382004 UBE2D4Q9Y2X8 147 aa4.52□□□□□ -1.69
RFX3-204ENST00000382004 SLPIP03973 132 aa4.52□□□□□ -1.69
RFX3-204ENST00000382004 C11orf86A6NJI1 115 aa4.52□□□□□ -1.69
RFX3-204ENST00000382004 DEFB1P60022 68 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms