RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 TMEM262E9PQX1 116 aa8.67□□□□□ -1.02
SMAD9-202ENST00000379826 C19orf54Q5BKX5 351 aa8.67□□□□□ -1.02
SMAD9-202ENST00000379826 UFSP1Q6NVU6 142 aa8.67□□□□□ -1.02
SMAD9-202ENST00000379826 ZFP2Q6ZN57 461 aa8.67□□□□□ -1.02
SMAD9-202ENST00000379826 C5orf56Q8N8D9 126 aa8.67□□□□□ -1.02
SMAD9-202ENST00000379826 IGHV3-38A0A0C4DH36 116 aa8.67□□□□□ -1.02
SMAD9-202ENST00000379826 C2orf82Q6UX34 121 aa8.67□□□□□ -1.02
SMAD9-202ENST00000379826 IGHV3-16A0A0C4DH30 117 aa8.67□□□□□ -1.02
SMAD9-202ENST00000379826 C11orf86A6NJI1 115 aa8.67□□□□□ -1.02
SMAD9-202ENST00000379826 KLK5Q9Y337 293 aaPredicted RBP8.67□□□□□ -1.02
SMAD9-202ENST00000379826 CFAP54Q96N23 3096 aa8.67□□□□□ -1.02
SMAD9-202ENST00000379826 TRPT1Q86TN4 253 aaKnown RBP8.67□□□□□ -1.02
SMAD9-202ENST00000379826 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.67□□□□□ -1.02
SMAD9-202ENST00000379826 PRR9Q5T870 116 aa8.67□□□□□ -1.02
SMAD9-202ENST00000379826 NCOR2Q9Y618 2525 aa8.66□□□□□ -1.02
SMAD9-202ENST00000379826 GAGE2BQ13066 116 aa8.66□□□□□ -1.02
SMAD9-202ENST00000379826 GAGE2EQ4V326 116 aa8.66□□□□□ -1.02
SMAD9-202ENST00000379826 SIRPDQ9H106 197 aa8.66□□□□□ -1.02
SMAD9-202ENST00000379826 ZFAND3Q9H8U3 227 aa8.66□□□□□ -1.02
SMAD9-202ENST00000379826 GAGE2DQ9UEU5 116 aa8.66□□□□□ -1.02
SMAD9-202ENST00000379826 WNK2Q9Y3S1 2297 aa8.66□□□□□ -1.02
SMAD9-202ENST00000379826 TRAV8-3A0A0A6YYJ7 113 aa8.66□□□□□ -1.02
SMAD9-202ENST00000379826 E9PLD3 99 aa8.66□□□□□ -1.02
SMAD9-202ENST00000379826 IGHV4-38-2P0DP08 117 aa8.66□□□□□ -1.02
SMAD9-202ENST00000379826 ZNF625Q96I27 306 aaPredicted RBP8.66□□□□□ -1.02
SMAD9-202ENST00000379826 C19orf84I3L1E1 186 aa8.66□□□□□ -1.02
SMAD9-202ENST00000379826 I3L3M4 83 aa8.66□□□□□ -1.02
SMAD9-202ENST00000379826 SLC25A20O43772 301 aa8.66□□□□□ -1.02
SMAD9-202ENST00000379826 FOXI1Q12951 378 aa8.66□□□□□ -1.02
SMAD9-202ENST00000379826 TRGV2A0A075B6R0 118 aa8.65□□□□□ -1.02
SMAD9-202ENST00000379826 BLCAPP62952 87 aa8.65□□□□□ -1.02
SMAD9-202ENST00000379826 NRACQ8N912 160 aa8.65□□□□□ -1.02
SMAD9-202ENST00000379826 TM2D2Q9BX73 214 aa8.65□□□□□ -1.02
SMAD9-202ENST00000379826 IGHV3-53P01767 116 aa8.65□□□□□ -1.03
SMAD9-202ENST00000379826 C9orf66Q5T8R8 295 aa8.65□□□□□ -1.03
SMAD9-202ENST00000379826 HHLA3Q9XRX5 114 aa8.65□□□□□ -1.03
SMAD9-202ENST00000379826 IGHV4-61A0A0C4DH41 118 aa8.64□□□□□ -1.03
SMAD9-202ENST00000379826 NEXN-AS1Q8NBZ9 246 aa8.64□□□□□ -1.03
SMAD9-202ENST00000379826 TOMM7Q9P0U1 55 aa8.64□□□□□ -1.03
SMAD9-202ENST00000379826 APOC4P55056 127 aa8.64□□□□□ -1.03
SMAD9-202ENST00000379826 FREM2Q5SZK8 3169 aa8.64□□□□□ -1.03
SMAD9-202ENST00000379826 IGHV1OR15-1A0A075B7D0 117 aa8.64□□□□□ -1.03
SMAD9-202ENST00000379826 INSL3P51460 131 aa8.64□□□□□ -1.03
SMAD9-202ENST00000379826 TRBV20-1A0A075B6N2 111 aa8.64□□□□□ -1.03
SMAD9-202ENST00000379826 F8W735 103 aaPredicted RBP8.64□□□□□ -1.03
SMAD9-202ENST00000379826 MUSTN1Q8IVN3 82 aa8.63□□□□□ -1.03
SMAD9-202ENST00000379826 C10orf126Q8N4M7 172 aa8.63□□□□□ -1.03
SMAD9-202ENST00000379826 ARHGAP32A7KAX9 2087 aa8.63□□□□□ -1.03
SMAD9-202ENST00000379826 CLPSL1A2RUU4 121 aa8.63□□□□□ -1.03
SMAD9-202ENST00000379826 SCGB1A1P11684 91 aa8.63□□□□□ -1.03
SMAD9-202ENST00000379826 ANKRD29Q8N6D5 301 aa8.63□□□□□ -1.03
SMAD9-202ENST00000379826 C10orf105Q8TEF2 133 aa8.63□□□□□ -1.03
SMAD9-202ENST00000379826 AJUBAQ96IF1 538 aa8.63□□□□□ -1.03
SMAD9-202ENST00000379826 PRRC2CQ9Y520 2896 aaKnown RBP8.63□□□□□ -1.03
SMAD9-202ENST00000379826 TCL1BO95988 128 aa8.63□□□□□ -1.03
SMAD9-202ENST00000379826 RNASE1P07998 156 aaKnown RBP8.63□□□□□ -1.03
SMAD9-202ENST00000379826 DEFB112Q30KQ8 113 aa8.63□□□□□ -1.03
SMAD9-202ENST00000379826 WDFY3Q8IZQ1 3526 aa8.62□□□□□ -1.03
SMAD9-202ENST00000379826 NTN5Q8WTR8 489 aaPredicted RBP8.62□□□□□ -1.03
SMAD9-202ENST00000379826 A4D1N5 150 aa8.62□□□□□ -1.03
SMAD9-202ENST00000379826 CDSNQ15517 529 aa8.62□□□□□ -1.03
SMAD9-202ENST00000379826 DEFB131AP59861 70 aa8.62□□□□□ -1.03
SMAD9-202ENST00000379826 BBC3Q96PG8 261 aaPredicted RBP8.62□□□□□ -1.03
SMAD9-202ENST00000379826 PTPRBP23467 1997 aa8.62□□□□□ -1.03
SMAD9-202ENST00000379826 H3BMM0 161 aa8.62□□□□□ -1.03
SMAD9-202ENST00000379826 LEPROTO15243 131 aa8.62□□□□□ -1.03
SMAD9-202ENST00000379826 UBE2WQ96B02 151 aa8.62□□□□□ -1.03
SMAD9-202ENST00000379826 LINC01619G3V211 115 aa8.61□□□□□ -1.03
SMAD9-202ENST00000379826 CFC1BP0CG36 223 aa8.61□□□□□ -1.03
SMAD9-202ENST00000379826 CFC1P0CG37 223 aa8.61□□□□□ -1.03
SMAD9-202ENST00000379826 HIVEP2P31629 2446 aa8.61□□□□□ -1.03
SMAD9-202ENST00000379826 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.61□□□□□ -1.03
SMAD9-202ENST00000379826 A0A0J9YXV3 536 aa8.61□□□□□ -1.03
SMAD9-202ENST00000379826 IGKV2-29A2NJV5 120 aaPredicted RBP8.61□□□□□ -1.03
SMAD9-202ENST00000379826 NDUFA11Q86Y39 141 aa8.61□□□□□ -1.03
SMAD9-202ENST00000379826 OR13C6PQ8NH95 151 aa8.61□□□□□ -1.03
SMAD9-202ENST00000379826 LENEPQ9Y5L5 61 aa8.61□□□□□ -1.03
SMAD9-202ENST00000379826 ZNF415Q09FC8 603 aa8.61□□□□□ -1.03
SMAD9-202ENST00000379826 MDFICQ9P1T7 246 aa8.61□□□□□ -1.03
SMAD9-202ENST00000379826 TRAV13-1A0A0B4J241 112 aa8.61□□□□□ -1.03
SMAD9-202ENST00000379826 UBE2E2Q96LR5 201 aa8.61□□□□□ -1.03
SMAD9-202ENST00000379826 VPREB3Q9UKI3 123 aa8.61□□□□□ -1.03
SMAD9-202ENST00000379826 PTPN13Q12923 2485 aa8.61□□□□□ -1.03
SMAD9-202ENST00000379826 MT-ATP8P03928 68 aa8.6□□□□□ -1.03
SMAD9-202ENST00000379826 C11orf68Q9H3H3 251 aaKnown RBP8.6□□□□□ -1.03
SMAD9-202ENST00000379826 SS18L2Q9UHA2 77 aa8.6□□□□□ -1.03
SMAD9-202ENST00000379826 NDUFA12Q9UI09 145 aa8.6□□□□□ -1.03
SMAD9-202ENST00000379826 Q8N1Y9 231 aa8.6□□□□□ -1.03
SMAD9-202ENST00000379826 VPS13AQ96RL7 3174 aa8.6□□□□□ -1.03
SMAD9-202ENST00000379826 AKAP6Q13023 2319 aa8.6□□□□□ -1.03
SMAD9-202ENST00000379826 TMEM101Q96IK0 257 aa8.59□□□□□ -1.03
SMAD9-202ENST00000379826 CEMP1Q6PRD7 247 aaPredicted RBP8.59□□□□□ -1.03
SMAD9-202ENST00000379826 Q8N6K4 173 aa8.59□□□□□ -1.03
SMAD9-202ENST00000379826 DAND5Q8N907 189 aa8.59□□□□□ -1.03
SMAD9-202ENST00000379826 MED13LQ71F56 2210 aa8.59□□□□□ -1.03
SMAD9-202ENST00000379826 TRGV1A0A0A0MS02 117 aa8.59□□□□□ -1.03
SMAD9-202ENST00000379826 IGHG4P01861 327 aa8.59□□□□□ -1.03
SMAD9-202ENST00000379826 ATRXP46100 2492 aa8.58□□□□□ -1.04
SMAD9-202ENST00000379826 CRYBA4P53673 196 aa8.58□□□□□ -1.04
SMAD9-202ENST00000379826 TEN1Q86WV5 123 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms