RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 K7EQG2 157 aa6.4□□□□□ -1.39
CRNKL1-202ENST00000377340 HOXA5P20719 270 aa6.4□□□□□ -1.39
CRNKL1-202ENST00000377340 TRPT1Q86TN4 253 aaKnown RBP6.4□□□□□ -1.39
CRNKL1-202ENST00000377340 TMEM242Q9NWH2 141 aa6.4□□□□□ -1.39
CRNKL1-202ENST00000377340 ADCYAP1P18509 176 aa6.39□□□□□ -1.39
CRNKL1-202ENST00000377340 PLA2G2EQ9NZK7 142 aa6.39□□□□□ -1.39
CRNKL1-202ENST00000377340 IGLV1-40P01703 118 aa6.39□□□□□ -1.39
CRNKL1-202ENST00000377340 IGLC2P0DOY2 106 aa6.39□□□□□ -1.39
CRNKL1-202ENST00000377340 HIST1H4GQ99525 98 aa6.39□□□□□ -1.39
CRNKL1-202ENST00000377340 MDFICQ9P1T7 246 aa6.39□□□□□ -1.39
CRNKL1-202ENST00000377340 C5orf52A6NGY3 159 aa6.39□□□□□ -1.39
CRNKL1-202ENST00000377340 CKS1BP61024 79 aa6.39□□□□□ -1.39
CRNKL1-202ENST00000377340 KIR3DS1Q14943 382 aa6.39□□□□□ -1.39
CRNKL1-202ENST00000377340 RNASE13Q5GAN3 156 aaKnown RBP6.39□□□□□ -1.39
CRNKL1-202ENST00000377340 C6orf226Q5I0X4 101 aa6.39□□□□□ -1.39
CRNKL1-202ENST00000377340 IFI27L1Q96BM0 104 aa6.39□□□□□ -1.39
CRNKL1-202ENST00000377340 F8W735 103 aaPredicted RBP6.39□□□□□ -1.39
CRNKL1-202ENST00000377340 H3BMM0 161 aa6.39□□□□□ -1.39
CRNKL1-202ENST00000377340 LGALS9O00182 355 aa6.39□□□□□ -1.39
CRNKL1-202ENST00000377340 CCL18P55774 89 aa6.39□□□□□ -1.39
CRNKL1-202ENST00000377340 TEX43Q6ZNM6 134 aa6.39□□□□□ -1.39
CRNKL1-202ENST00000377340 C11orf45Q8TAV5 145 aa6.39□□□□□ -1.39
CRNKL1-202ENST00000377340 UBE2WQ96B02 151 aa6.39□□□□□ -1.39
CRNKL1-202ENST00000377340 NBEAQ8NFP9 2946 aa6.38□□□□□ -1.39
CRNKL1-202ENST00000377340 ZFAND3Q9H8U3 227 aa6.38□□□□□ -1.39
CRNKL1-202ENST00000377340 LENEPQ9Y5L5 61 aa6.38□□□□□ -1.39
CRNKL1-202ENST00000377340 CFAP47Q6ZTR5 3102 aa6.38□□□□□ -1.39
CRNKL1-202ENST00000377340 TRBV24-1A0A075B6N3 115 aa6.38□□□□□ -1.39
CRNKL1-202ENST00000377340 NDUFA7O95182 113 aa6.38□□□□□ -1.39
CRNKL1-202ENST00000377340 LTAP01374 205 aa6.38□□□□□ -1.39
CRNKL1-202ENST00000377340 HLA-DRB4P13762 266 aa6.38□□□□□ -1.39
CRNKL1-202ENST00000377340 GDF5OSQ5U4N7 250 aa6.38□□□□□ -1.39
CRNKL1-202ENST00000377340 C16orf74Q96GX8 76 aa6.38□□□□□ -1.39
CRNKL1-202ENST00000377340 HLA-DRB4X5D2U9 266 aa6.38□□□□□ -1.39
CRNKL1-202ENST00000377340 PRSS46E5RG02 174 aa6.38□□□□□ -1.39
CRNKL1-202ENST00000377340 PRM2P04554 102 aa6.38□□□□□ -1.39
CRNKL1-202ENST00000377340 RHOHQ15669 191 aa6.38□□□□□ -1.39
CRNKL1-202ENST00000377340 FAM104BQ5XKR9 115 aa6.38□□□□□ -1.39
CRNKL1-202ENST00000377340 IGKV2D-24A0A075B6R9 120 aa6.37□□□□□ -1.39
CRNKL1-202ENST00000377340 GATA1P15976 413 aaPredicted RBP6.37□□□□□ -1.39
CRNKL1-202ENST00000377340 FAM222AQ5U5X8 452 aa6.37□□□□□ -1.39
CRNKL1-202ENST00000377340 C11orf52Q96A22 123 aa6.37□□□□□ -1.39
CRNKL1-202ENST00000377340 ZNF625Q96I27 306 aaPredicted RBP6.37□□□□□ -1.39
CRNKL1-202ENST00000377340 TMEM243Q9BU79 118 aa6.37□□□□□ -1.39
CRNKL1-202ENST00000377340 MUC3AQ02505 3323 aa6.37□□□□□ -1.39
CRNKL1-202ENST00000377340 K7EN84 100 aa6.37□□□□□ -1.39
CRNKL1-202ENST00000377340 HIST1H2BKO60814 126 aa6.37□□□□□ -1.39
CRNKL1-202ENST00000377340 HIST1H2BJP06899 126 aa6.37□□□□□ -1.39
CRNKL1-202ENST00000377340 HIST1H2BOP23527 126 aa6.37□□□□□ -1.39
CRNKL1-202ENST00000377340 HIST1H2BBP33778 126 aa6.37□□□□□ -1.39
CRNKL1-202ENST00000377340 HIST1H2BDP58876 126 aa6.37□□□□□ -1.39
CRNKL1-202ENST00000377340 HIST1H2BCP62807 126 aa6.37□□□□□ -1.39
CRNKL1-202ENST00000377340 HIST2H2BEQ16778 126 aa6.37□□□□□ -1.39
CRNKL1-202ENST00000377340 SPATA45Q537H7 98 aa6.37□□□□□ -1.39
CRNKL1-202ENST00000377340 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.37□□□□□ -1.39
CRNKL1-202ENST00000377340 HIST1H2BHQ93079 126 aa6.37□□□□□ -1.39
CRNKL1-202ENST00000377340 HIST1H2BNQ99877 126 aa6.37□□□□□ -1.39
CRNKL1-202ENST00000377340 HIST1H2BMQ99879 126 aa6.37□□□□□ -1.39
CRNKL1-202ENST00000377340 NDUFAF3Q9BU61 184 aa6.37□□□□□ -1.39
CRNKL1-202ENST00000377340 RBAKDNA6NC62 111 aa6.37□□□□□ -1.39
CRNKL1-202ENST00000377340 HERV-K104P63124 156 aa6.37□□□□□ -1.39
CRNKL1-202ENST00000377340 RAB37Q96AX2 223 aa6.37□□□□□ -1.39
CRNKL1-202ENST00000377340 JPT2Q9H910 190 aa6.37□□□□□ -1.39
CRNKL1-202ENST00000377340 V9GYV3 84 aa6.37□□□□□ -1.39
CRNKL1-202ENST00000377340 IGHV3-30P01768 117 aa6.36□□□□□ -1.39
CRNKL1-202ENST00000377340 IGHV3-33P01772 117 aa6.36□□□□□ -1.39
CRNKL1-202ENST00000377340 IGHV3-30-3P0DP02 117 aa6.36□□□□□ -1.39
CRNKL1-202ENST00000377340 IGHV3-30-5P0DP03 117 aa6.36□□□□□ -1.39
CRNKL1-202ENST00000377340 MRPL51Q4U2R6 128 aaKnown RBP6.36□□□□□ -1.39
CRNKL1-202ENST00000377340 KLF12Q9Y4X4 402 aa6.36□□□□□ -1.39
CRNKL1-202ENST00000377340 IGLV10-54A0A075B6I4 117 aa6.36□□□□□ -1.39
CRNKL1-202ENST00000377340 A8MWP6 167 aa6.36□□□□□ -1.39
CRNKL1-202ENST00000377340 TYMSP04818 313 aa6.36□□□□□ -1.39
CRNKL1-202ENST00000377340 LINC00158P58513 81 aa6.36□□□□□ -1.39
CRNKL1-202ENST00000377340 SS18Q15532 418 aa6.36□□□□□ -1.39
CRNKL1-202ENST00000377340 ZNF503Q96F45 646 aa6.36□□□□□ -1.39
CRNKL1-202ENST00000377340 TP53TG1Q9Y2A0 90 aa6.36□□□□□ -1.39
CRNKL1-202ENST00000377340 MRPL23Q16540 153 aaKnown RBP6.36□□□□□ -1.39
CRNKL1-202ENST00000377340 KRTAP24-1Q3LI83 254 aa6.36□□□□□ -1.39
CRNKL1-202ENST00000377340 Q6ZTI0 123 aa6.36□□□□□ -1.39
CRNKL1-202ENST00000377340 C20orf173Q96LM9 149 aa6.36□□□□□ -1.39
CRNKL1-202ENST00000377340 HHLA3Q9XRX5 114 aa6.36□□□□□ -1.39
CRNKL1-202ENST00000377340 C9orf47Q6ZRZ4 202 aa6.36□□□□□ -1.39
CRNKL1-202ENST00000377340 TRAV9-2A0A087WT02 112 aa6.35□□□□□ -1.39
CRNKL1-202ENST00000377340 LOC107984156A0A0G2JMH3 177 aa6.35□□□□□ -1.39
CRNKL1-202ENST00000377340 ZFAND6Q6FIF0 208 aa6.35□□□□□ -1.39
CRNKL1-202ENST00000377340 ARL17AQ8IVW1 177 aa6.35□□□□□ -1.39
CRNKL1-202ENST00000377340 SMIM20Q8N5G0 67 aa6.35□□□□□ -1.39
CRNKL1-202ENST00000377340 TP53TG3Q9ULZ0 132 aa6.35□□□□□ -1.39
CRNKL1-202ENST00000377340 I3L3M4 83 aa6.35□□□□□ -1.39
CRNKL1-202ENST00000377340 UBE2CO00762 179 aa6.35□□□□□ -1.39
CRNKL1-202ENST00000377340 HINT1P49773 126 aaPredicted RBP6.35□□□□□ -1.39
CRNKL1-202ENST00000377340 PROK1P58294 105 aa6.35□□□□□ -1.39
CRNKL1-202ENST00000377340 C2orf66Q6UXQ4 117 aa6.35□□□□□ -1.39
CRNKL1-202ENST00000377340 RNASE8Q8TDE3 154 aaKnown RBP6.35□□□□□ -1.39
CRNKL1-202ENST00000377340 GFRA4Q9GZZ7 299 aa6.35□□□□□ -1.39
CRNKL1-202ENST00000377340 GTSF1LQ9H1H1 148 aa6.35□□□□□ -1.39
CRNKL1-202ENST00000377340 NPC2P61916 151 aa6.35□□□□□ -1.39
CRNKL1-202ENST00000377340 ATP6V0E2Q8NHE4 81 aa6.35□□□□□ -1.39
CRNKL1-202ENST00000377340 C11orf1Q9H5F2 150 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms