RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 IGKV1D-39P04432 117 aa6.63□□□□□ -1.35
HSPG2-203ENST00000374695 BPESC1Q9GZL8 116 aa6.63□□□□□ -1.35
HSPG2-203ENST00000374695 SPTBN4Q9H254 2564 aa6.63□□□□□ -1.35
HSPG2-203ENST00000374695 BRK1Q8WUW1 75 aa6.63□□□□□ -1.35
HSPG2-203ENST00000374695 CLPSP04118 112 aa6.63□□□□□ -1.35
HSPG2-203ENST00000374695 ELANEP08246 267 aa6.63□□□□□ -1.35
HSPG2-203ENST00000374695 TMEM61Q8N0U2 210 aa6.63□□□□□ -1.35
HSPG2-203ENST00000374695 IGHV3-38A0A0C4DH36 116 aa6.62□□□□□ -1.35
HSPG2-203ENST00000374695 Q6ZUT4 128 aa6.62□□□□□ -1.35
HSPG2-203ENST00000374695 TRAV4A0A0B4J268 109 aa6.62□□□□□ -1.35
HSPG2-203ENST00000374695 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.62□□□□□ -1.35
HSPG2-203ENST00000374695 E7EQL1 145 aa6.62□□□□□ -1.35
HSPG2-203ENST00000374695 LGALS9O00182 355 aa6.62□□□□□ -1.35
HSPG2-203ENST00000374695 CAMK2N2Q96S95 79 aa6.62□□□□□ -1.35
HSPG2-203ENST00000374695 NOP10Q9NPE3 64 aaKnown RBP6.62□□□□□ -1.35
HSPG2-203ENST00000374695 K7EQD1 137 aa6.62□□□□□ -1.35
HSPG2-203ENST00000374695 PRR30Q53SZ7 412 aaPredicted RBP6.62□□□□□ -1.35
HSPG2-203ENST00000374695 COL4A1P02462 1669 aa6.62□□□□□ -1.35
HSPG2-203ENST00000374695 PRB4P10163 310 aaPredicted RBP6.61□□□□□ -1.35
HSPG2-203ENST00000374695 FOXE3Q13461 319 aa6.61□□□□□ -1.35
HSPG2-203ENST00000374695 CLPSL2Q6UWE3 100 aa6.61□□□□□ -1.35
HSPG2-203ENST00000374695 C9orf47Q6ZRZ4 202 aa6.61□□□□□ -1.35
HSPG2-203ENST00000374695 NDUFA1O15239 70 aa6.61□□□□□ -1.35
HSPG2-203ENST00000374695 HIST2H2BCQ6DN03 193 aa6.61□□□□□ -1.35
HSPG2-203ENST00000374695 CRYGBP07316 175 aa6.61□□□□□ -1.35
HSPG2-203ENST00000374695 DUX4L9Q6RFH8 374 aaPredicted RBP6.61□□□□□ -1.35
HSPG2-203ENST00000374695 NAV2Q8IVL1 2488 aa6.61□□□□□ -1.35
HSPG2-203ENST00000374695 UBE2AP49459 152 aa6.6□□□□□ -1.35
HSPG2-203ENST00000374695 IGKV1OR2-108A0A075B7D4 117 aa6.6□□□□□ -1.35
HSPG2-203ENST00000374695 A0A0G2JRQ6 117 aa6.6□□□□□ -1.35
HSPG2-203ENST00000374695 IGKV3D-7A0A0C4DH55 119 aa6.6□□□□□ -1.35
HSPG2-203ENST00000374695 LYPD2Q6UXB3 125 aa6.6□□□□□ -1.35
HSPG2-203ENST00000374695 PCP2Q8IVA1 136 aa6.6□□□□□ -1.35
HSPG2-203ENST00000374695 C3orf22Q8N5N4 141 aa6.6□□□□□ -1.35
HSPG2-203ENST00000374695 TRBV10-2A0A0K0K1G8 114 aa6.6□□□□□ -1.35
HSPG2-203ENST00000374695 PIFOQ8TCI5 191 aa6.6□□□□□ -1.35
HSPG2-203ENST00000374695 TRBV7-3A0A075B6L6 115 aa6.6□□□□□ -1.35
HSPG2-203ENST00000374695 NDUFC2-KCTD14E9PQ53 114 aa6.6□□□□□ -1.35
HSPG2-203ENST00000374695 C17orf58Q2M2W7 97 aa6.6□□□□□ -1.35
HSPG2-203ENST00000374695 ANKRD11Q6UB99 2663 aaPredicted RBP6.6□□□□□ -1.35
HSPG2-203ENST00000374695 COL8A2P25067 703 aa6.6□□□□□ -1.35
HSPG2-203ENST00000374695 KIR2DL5BQ8NHK3 375 aa6.6□□□□□ -1.35
HSPG2-203ENST00000374695 TM2D2Q9BX73 214 aa6.59□□□□□ -1.35
HSPG2-203ENST00000374695 U3KQE9 123 aa6.59□□□□□ -1.35
HSPG2-203ENST00000374695 A4D1N5 150 aa6.59□□□□□ -1.35
HSPG2-203ENST00000374695 DIRC1Q969H9 104 aa6.59□□□□□ -1.35
HSPG2-203ENST00000374695 FAM240AA0A1B0GVK7 77 aa6.59□□□□□ -1.35
HSPG2-203ENST00000374695 MTORP42345 2549 aa6.59□□□□□ -1.35
HSPG2-203ENST00000374695 CD59P13987 128 aa6.59□□□□□ -1.35
HSPG2-203ENST00000374695 C14orf177Q52M58 125 aa6.59□□□□□ -1.35
HSPG2-203ENST00000374695 UPK3BQ9BT76 320 aa6.59□□□□□ -1.35
HSPG2-203ENST00000374695 IGHV4-28A0A0C4DH34 117 aa6.59□□□□□ -1.35
HSPG2-203ENST00000374695 EP400Q96L91 3159 aa6.59□□□□□ -1.36
HSPG2-203ENST00000374695 RUSC1-AS1Q66K80 236 aa6.59□□□□□ -1.36
HSPG2-203ENST00000374695 Q8N1Y9 231 aa6.59□□□□□ -1.36
HSPG2-203ENST00000374695 PRRC2CQ9Y520 2896 aaKnown RBP6.59□□□□□ -1.36
HSPG2-203ENST00000374695 IGHV1-58A0A0C4DH39 117 aa6.59□□□□□ -1.36
HSPG2-203ENST00000374695 COL4A5P29400 1685 aa6.59□□□□□ -1.36
HSPG2-203ENST00000374695 RS1O15537 224 aa6.58□□□□□ -1.36
HSPG2-203ENST00000374695 B3GALT5-AS1P59052 145 aa6.58□□□□□ -1.36
HSPG2-203ENST00000374695 ZNF726P1Q15940 193 aa6.58□□□□□ -1.36
HSPG2-203ENST00000374695 LY6DQ14210 128 aa6.58□□□□□ -1.36
HSPG2-203ENST00000374695 NDUFA7O95182 113 aa6.58□□□□□ -1.36
HSPG2-203ENST00000374695 GYPEP15421 78 aa6.58□□□□□ -1.36
HSPG2-203ENST00000374695 RNASE13Q5GAN3 156 aaKnown RBP6.58□□□□□ -1.36
HSPG2-203ENST00000374695 SPTSSBQ8NFR3 76 aa6.58□□□□□ -1.36
HSPG2-203ENST00000374695 K7EN84 100 aa6.58□□□□□ -1.36
HSPG2-203ENST00000374695 CCL18P55774 89 aa6.58□□□□□ -1.36
HSPG2-203ENST00000374695 B9D2Q9BPU9 175 aa6.58□□□□□ -1.36
HSPG2-203ENST00000374695 IGKV1-6A0A0C4DH72 117 aa6.58□□□□□ -1.36
HSPG2-203ENST00000374695 IGKV4-1P06312 121 aa6.58□□□□□ -1.36
HSPG2-203ENST00000374695 KAAG1Q9UBP8 84 aa6.58□□□□□ -1.36
HSPG2-203ENST00000374695 USP17L23D6RBM5 183 aa6.58□□□□□ -1.36
HSPG2-203ENST00000374695 THSD7BQ9C0I4 1608 aa6.58□□□□□ -1.36
HSPG2-203ENST00000374695 G3V318 75 aa6.58□□□□□ -1.36
HSPG2-203ENST00000374695 MLANAQ16655 118 aa6.58□□□□□ -1.36
HSPG2-203ENST00000374695 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.57□□□□□ -1.36
HSPG2-203ENST00000374695 IGKV2-29A2NJV5 120 aaPredicted RBP6.57□□□□□ -1.36
HSPG2-203ENST00000374695 WT1-ASQ06250 92 aa6.57□□□□□ -1.36
HSPG2-203ENST00000374695 TOMM6Q96B49 74 aa6.57□□□□□ -1.36
HSPG2-203ENST00000374695 JMJD1CQ15652 2540 aa6.57□□□□□ -1.36
HSPG2-203ENST00000374695 VPREB3Q9UKI3 123 aa6.57□□□□□ -1.36
HSPG2-203ENST00000374695 CASC2Q6XLA1 102 aa6.57□□□□□ -1.36
HSPG2-203ENST00000374695 SPART-AS1P0CW21 52 aa6.57□□□□□ -1.36
HSPG2-203ENST00000374695 TIMM17AQ99595 171 aa6.57□□□□□ -1.36
HSPG2-203ENST00000374695 GNLYP22749 145 aa6.57□□□□□ -1.36
HSPG2-203ENST00000374695 C9orf66Q5T8R8 295 aa6.57□□□□□ -1.36
HSPG2-203ENST00000374695 H0Y9J4 135 aa6.57□□□□□ -1.36
HSPG2-203ENST00000374695 C15orf65H3BRN8 121 aa6.57□□□□□ -1.36
HSPG2-203ENST00000374695 FAM110AQ9BQ89 295 aa6.57□□□□□ -1.36
HSPG2-203ENST00000374695 WIPF3A6NGB9 483 aa6.56□□□□□ -1.36
HSPG2-203ENST00000374695 WFDC2Q14508 124 aa6.56□□□□□ -1.36
HSPG2-203ENST00000374695 MED14OSP0DP75 135 aa6.56□□□□□ -1.36
HSPG2-203ENST00000374695 GTSF1Q8WW33 167 aa6.56□□□□□ -1.36
HSPG2-203ENST00000374695 C11orf86A6NJI1 115 aa6.56□□□□□ -1.36
HSPG2-203ENST00000374695 FAM236DA0A1B0GTK5 79 aa6.56□□□□□ -1.36
HSPG2-203ENST00000374695 FAM236CP0DP71 79 aa6.56□□□□□ -1.36
HSPG2-203ENST00000374695 RNF223E7ERA6 249 aa6.56□□□□□ -1.36
HSPG2-203ENST00000374695 Q0VFX4 171 aa6.56□□□□□ -1.36
HSPG2-203ENST00000374695 SEM1Q6ZVN7 128 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms