RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 IFNA1P01562 189 aa15.33■□□□□ 0.04
COL9A2-201ENST00000372736 IGLV2-8P01709 118 aa15.33■□□□□ 0.04
COL9A2-201ENST00000372736 CRYGDP07320 174 aa15.33■□□□□ 0.04
COL9A2-201ENST00000372736 GAGE1Q13065 139 aa15.33■□□□□ 0.04
COL9A2-201ENST00000372736 GAGE4Q13068 117 aa15.33■□□□□ 0.04
COL9A2-201ENST00000372736 GAGE5Q13069 117 aa15.33■□□□□ 0.04
COL9A2-201ENST00000372736 GAGE13Q4V321 117 aa15.33■□□□□ 0.04
COL9A2-201ENST00000372736 LINC01556Q5JQF7 62 aa15.33■□□□□ 0.04
COL9A2-201ENST00000372736 LELP1Q5T871 98 aa15.33■□□□□ 0.04
COL9A2-201ENST00000372736 SPATA12Q7Z6I5 190 aa15.33■□□□□ 0.04
COL9A2-201ENST00000372736 MSRB1Q9NZV6 116 aa15.33■□□□□ 0.04
COL9A2-201ENST00000372736 PDE6DO43924 150 aa15.32■□□□□ 0.04
COL9A2-201ENST00000372736 OR10J3Q5JRS4 329 aa15.32■□□□□ 0.04
COL9A2-201ENST00000372736 NFE4Q86UQ8 179 aa15.32■□□□□ 0.04
COL9A2-201ENST00000372736 C10orf126Q8N4M7 172 aa15.32■□□□□ 0.04
COL9A2-201ENST00000372736 OR10AG1Q8NH19 301 aa15.32■□□□□ 0.04
COL9A2-201ENST00000372736 TRAV8-6A0A0B4J262 113 aa15.31■□□□□ 0.04
COL9A2-201ENST00000372736 SNAI2O43623 268 aa15.31■□□□□ 0.04
COL9A2-201ENST00000372736 KRTAP10-2P60368 255 aa15.31■□□□□ 0.04
COL9A2-201ENST00000372736 SSBP4Q9BWG4 385 aaPredicted RBP15.31■□□□□ 0.04
COL9A2-201ENST00000372736 RAB19A4D1S5 217 aa15.3■□□□□ 0.04
COL9A2-201ENST00000372736 TRBV20OR9-2A0A075B6H5 130 aa15.29■□□□□ 0.04
COL9A2-201ENST00000372736 OR5AL1P0C617 328 aa15.29■□□□□ 0.04
COL9A2-201ENST00000372736 GNG4P50150 75 aa15.29■□□□□ 0.04
COL9A2-201ENST00000372736 ALKAL2Q6UX46 152 aa15.29■□□□□ 0.04
COL9A2-201ENST00000372736 SMIM12Q96EX1 92 aa15.29■□□□□ 0.04
COL9A2-201ENST00000372736 VAX2Q9UIW0 290 aa15.29■□□□□ 0.04
COL9A2-201ENST00000372736 LRP1BQ9NZR2 4599 aa15.29■□□□□ 0.04
COL9A2-201ENST00000372736 A0A1B0GVG6 124 aa15.28■□□□□ 0.04
COL9A2-201ENST00000372736 MED9Q9NWA0 146 aa15.28■□□□□ 0.04
COL9A2-201ENST00000372736 BOLA1Q9Y3E2 137 aa15.28■□□□□ 0.04
COL9A2-201ENST00000372736 MUC21A0A0G2JKD1 596 aa15.26■□□□□ 0.03
COL9A2-201ENST00000372736 MUC21A0A140T8X8 626 aa15.26■□□□□ 0.03
COL9A2-201ENST00000372736 C19orf71A6NCJ1 209 aa15.26■□□□□ 0.03
COL9A2-201ENST00000372736 TAGLN2P37802 199 aaKnown RBP15.26■□□□□ 0.03
COL9A2-201ENST00000372736 ERVFC1-1P60608 527 aa15.26■□□□□ 0.03
COL9A2-201ENST00000372736 Q8N3U1 123 aa15.25■□□□□ 0.03
COL9A2-201ENST00000372736 RYR1P21817 5038 aa15.24■□□□□ 0.03
COL9A2-201ENST00000372736 TRBV10-1A0A0K0K1A3 114 aa15.24■□□□□ 0.03
COL9A2-201ENST00000372736 IBA57-AS1B1ANH7 110 aa15.24■□□□□ 0.03
COL9A2-201ENST00000372736 IGHV3-30P01768 117 aa15.24■□□□□ 0.03
COL9A2-201ENST00000372736 IGHV3-33P01772 117 aa15.24■□□□□ 0.03
COL9A2-201ENST00000372736 IGHV3-30-3P0DP02 117 aa15.24■□□□□ 0.03
COL9A2-201ENST00000372736 IGHV3-30-5P0DP03 117 aa15.24■□□□□ 0.03
COL9A2-201ENST00000372736 GZMBP10144 247 aa15.24■□□□□ 0.03
COL9A2-201ENST00000372736 NKX2-5P52952 324 aaPredicted RBP15.24■□□□□ 0.03
COL9A2-201ENST00000372736 SPANXN1Q5VSR9 72 aa15.24■□□□□ 0.03
COL9A2-201ENST00000372736 A0A087WTM6 91 aa15.23■□□□□ 0.03
COL9A2-201ENST00000372736 IGLC6P0CF74 106 aa15.23■□□□□ 0.03
COL9A2-201ENST00000372736 RAB4BP61018 213 aa15.23■□□□□ 0.03
COL9A2-201ENST00000372736 OR2D3Q8NGH3 330 aa15.23■□□□□ 0.03
COL9A2-201ENST00000372736 DAZAP1Q96EP5 407 aaKnown RBP15.23■□□□□ 0.03
COL9A2-201ENST00000372736 DNAH5Q8TE73 4624 aa15.22■□□□□ 0.03
COL9A2-201ENST00000372736 A0A087WWC5 75 aa15.22■□□□□ 0.03
COL9A2-201ENST00000372736 BLOC1S1P78537 153 aa15.22■□□□□ 0.03
COL9A2-201ENST00000372736 ZNF56Q15929 161 aa15.22■□□□□ 0.03
COL9A2-201ENST00000372736 LYPD6BQ8NI32 183 aa15.22■□□□□ 0.03
COL9A2-201ENST00000372736 CDK2AP2O75956 126 aa15.21■□□□□ 0.03
COL9A2-201ENST00000372736 RPS20P60866 119 aaKnown RBP15.21■□□□□ 0.03
COL9A2-201ENST00000372736 UBE2D3P61077 147 aa15.21■□□□□ 0.03
COL9A2-201ENST00000372736 UBE2D2P62837 147 aa15.21■□□□□ 0.03
COL9A2-201ENST00000372736 FER1L6-AS1Q8NA97 138 aa15.21■□□□□ 0.03
COL9A2-201ENST00000372736 OR10G8Q8NGN5 311 aa15.21■□□□□ 0.03
COL9A2-201ENST00000372736 HSPG2P98160 4391 aa15.2■□□□□ 0.02
COL9A2-201ENST00000372736 TRBV7-3A0A075B6L6 115 aa15.2■□□□□ 0.02
COL9A2-201ENST00000372736 RBFOX3A6NFN3 312 aa15.2■□□□□ 0.02
COL9A2-201ENST00000372736 EREGO14944 169 aa15.2■□□□□ 0.02
COL9A2-201ENST00000372736 P01737 135 aa15.2■□□□□ 0.02
COL9A2-201ENST00000372736 SSTP61278 116 aa15.2■□□□□ 0.02
COL9A2-201ENST00000372736 RPL36AP83881 106 aaKnown RBP15.2■□□□□ 0.02
COL9A2-201ENST00000372736 RPL36ALQ969Q0 106 aaKnown RBP15.2■□□□□ 0.02
COL9A2-201ENST00000372736 AP1S3Q96PC3 154 aa15.2■□□□□ 0.02
COL9A2-201ENST00000372736 KIF25-AS1Q9Y6Z4 181 aa15.2■□□□□ 0.02
COL9A2-201ENST00000372736 LAGE3Q14657 143 aa15.19■□□□□ 0.02
COL9A2-201ENST00000372736 NEXN-AS1Q8NBZ9 246 aa15.19■□□□□ 0.02
COL9A2-201ENST00000372736 TPPP3Q9BW30 176 aa15.19■□□□□ 0.02
COL9A2-201ENST00000372736 Q9HAA7 133 aa15.19■□□□□ 0.02
COL9A2-201ENST00000372736 BIN3Q9NQY0 253 aa15.19■□□□□ 0.02
COL9A2-201ENST00000372736 FUSP35637 526 aaKnown RBP eCLIP15.18■□□□□ 0.02
COL9A2-201ENST00000372736 K7EN84 100 aa15.17■□□□□ 0.02
COL9A2-201ENST00000372736 APOBP04114 4563 aaKnown RBP15.16■□□□□ 0.02
COL9A2-201ENST00000372736 XKRY2A2RUG3 117 aa15.16■□□□□ 0.02
COL9A2-201ENST00000372736 TMEM250H0YL14 139 aa15.16■□□□□ 0.02
COL9A2-201ENST00000372736 CDPF1Q6NVV7 123 aa15.16■□□□□ 0.02
COL9A2-201ENST00000372736 PGPEP1Q9NXJ5 209 aa15.16■□□□□ 0.02
COL9A2-201ENST00000372736 SMIM17P0DL12 118 aa15.15■□□□□ 0.02
COL9A2-201ENST00000372736 CACNG7P62955 275 aa15.15■□□□□ 0.02
COL9A2-201ENST00000372736 DAZ4Q86SG3 579 aaKnown RBP15.15■□□□□ 0.02
COL9A2-201ENST00000372736 NIT1Q86X76 327 aa15.15■□□□□ 0.02
COL9A2-201ENST00000372736 NUDT10Q8NFP7 164 aa15.15■□□□□ 0.02
COL9A2-201ENST00000372736 OCC1Q8TAD7 63 aa15.15■□□□□ 0.02
COL9A2-201ENST00000372736 NUDT11Q96G61 164 aa15.15■□□□□ 0.02
COL9A2-201ENST00000372736 DAZ3Q9NR90 486 aaKnown RBP15.15■□□□□ 0.02
COL9A2-201ENST00000372736 LRCOL1A6NCL2 159 aa15.14■□□□□ 0.01
COL9A2-201ENST00000372736 F5H697 171 aa15.14■□□□□ 0.01
COL9A2-201ENST00000372736 PSCAO43653 123 aa15.14■□□□□ 0.01
COL9A2-201ENST00000372736 F2Z2F3 143 aa15.13■□□□□ 0.01
COL9A2-201ENST00000372736 CTRLP40313 264 aa15.13■□□□□ 0.01
COL9A2-201ENST00000372736 LYZL1Q6UWQ5 148 aa15.13■□□□□ 0.01
COL9A2-201ENST00000372736 KRTAP17-1Q9BYP8 105 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms