RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 PMVKQ15126 192 aa9.05□□□□□ -0.96
SNX21-205ENST00000372547 UNQ9165/PRO28630Q6UXU0 137 aa9.05□□□□□ -0.96
SNX21-205ENST00000372547 NCOR2Q9Y618 2525 aa9.05□□□□□ -0.96
SNX21-205ENST00000372547 TRBV12-3P01733 135 aa9.04□□□□□ -0.96
SNX21-205ENST00000372547 IGHV3-11P01762 117 aa9.04□□□□□ -0.96
SNX21-205ENST00000372547 GPHB5Q86YW7 130 aa9.04□□□□□ -0.96
SNX21-205ENST00000372547 ZNRF2Q8NHG8 242 aa9.04□□□□□ -0.96
SNX21-205ENST00000372547 MUC4Q99102 2169 aa9.04□□□□□ -0.96
SNX21-205ENST00000372547 J3QQQ9 107 aa9.03□□□□□ -0.96
SNX21-205ENST00000372547 SAA4P35542 130 aa9.03□□□□□ -0.96
SNX21-205ENST00000372547 RNASE3P12724 160 aaKnown RBP9.03□□□□□ -0.96
SNX21-205ENST00000372547 C9orf139Q6ZV77 190 aa9.03□□□□□ -0.96
SNX21-205ENST00000372547 ADARB2-AS1A8MUL3 147 aa9.02□□□□□ -0.96
SNX21-205ENST00000372547 SLC25A29Q8N8R3 303 aa9.02□□□□□ -0.96
SNX21-205ENST00000372547 NTN5Q8WTR8 489 aaPredicted RBP9.02□□□□□ -0.96
SNX21-205ENST00000372547 MRPL53Q96EL3 112 aaKnown RBP9.02□□□□□ -0.96
SNX21-205ENST00000372547 LINC00477Q96M19 166 aa9.02□□□□□ -0.96
SNX21-205ENST00000372547 TRBV7-1A0A0A6YYK4 115 aa9.02□□□□□ -0.97
SNX21-205ENST00000372547 SDHAF1A6NFY7 115 aa9.02□□□□□ -0.97
SNX21-205ENST00000372547 SNCGO76070 127 aa9.02□□□□□ -0.97
SNX21-205ENST00000372547 IGKV3-20P01619 116 aa9.02□□□□□ -0.97
SNX21-205ENST00000372547 EBI3Q14213 229 aa9.02□□□□□ -0.97
SNX21-205ENST00000372547 SUMO4Q6EEV6 95 aa9.02□□□□□ -0.97
SNX21-205ENST00000372547 IGIPA6NJ69 53 aa9.01□□□□□ -0.97
SNX21-205ENST00000372547 CCL21O00585 134 aa9.01□□□□□ -0.97
SNX21-205ENST00000372547 CDSNQ15517 529 aa9.01□□□□□ -0.97
SNX21-205ENST00000372547 MINOS1Q5TGZ0 78 aa9.01□□□□□ -0.97
SNX21-205ENST00000372547 AJUBAQ96IF1 538 aa9.01□□□□□ -0.97
SNX21-205ENST00000372547 MINOS1-NBL1R4GNA1 71 aa9.01□□□□□ -0.97
SNX21-205ENST00000372547 TRAV4A0A0B4J268 109 aa9.01□□□□□ -0.97
SNX21-205ENST00000372547 CRLF1O75462 422 aa9.01□□□□□ -0.97
SNX21-205ENST00000372547 ELANEP08246 267 aa9.01□□□□□ -0.97
SNX21-205ENST00000372547 NPC2P61916 151 aa9.01□□□□□ -0.97
SNX21-205ENST00000372547 GAGE2BQ13066 116 aa9.01□□□□□ -0.97
SNX21-205ENST00000372547 GAGE2EQ4V326 116 aa9.01□□□□□ -0.97
SNX21-205ENST00000372547 PAPPA-AS1Q5QFB9 102 aa9.01□□□□□ -0.97
SNX21-205ENST00000372547 MUSTN1Q8IVN3 82 aa9.01□□□□□ -0.97
SNX21-205ENST00000372547 ITLN2Q8WWU7 325 aaPredicted RBP9.01□□□□□ -0.97
SNX21-205ENST00000372547 GAGE2DQ9UEU5 116 aa9.01□□□□□ -0.97
SNX21-205ENST00000372547 ZNF580Q9UK33 172 aa9.01□□□□□ -0.97
SNX21-205ENST00000372547 SORL1Q92673 2214 aa9□□□□□ -0.97
SNX21-205ENST00000372547 TRAV12-3A0A0B4J271 114 aa9□□□□□ -0.97
SNX21-205ENST00000372547 TMEM262E9PQX1 116 aa9□□□□□ -0.97
SNX21-205ENST00000372547 PRSS2P07478 247 aa9□□□□□ -0.97
SNX21-205ENST00000372547 FAM159AQ6UWV7 190 aa9□□□□□ -0.97
SNX21-205ENST00000372547 TEX49A0A1B0GTD5 131 aa9□□□□□ -0.97
SNX21-205ENST00000372547 OOSP1A8MZH6 123 aa9□□□□□ -0.97
SNX21-205ENST00000372547 GAGE5Q13069 117 aa9□□□□□ -0.97
SNX21-205ENST00000372547 GAGE6Q13070 117 aa9□□□□□ -0.97
SNX21-205ENST00000372547 ZNF56Q15929 161 aa9□□□□□ -0.97
SNX21-205ENST00000372547 UBTD1Q9HAC8 227 aa9□□□□□ -0.97
SNX21-205ENST00000372547 VCYO14598 125 aa8.99□□□□□ -0.97
SNX21-205ENST00000372547 PPP1R17O96001 155 aa8.99□□□□□ -0.97
SNX21-205ENST00000372547 TTC32Q5I0X7 151 aa8.99□□□□□ -0.97
SNX21-205ENST00000372547 VCX2Q9H322 139 aa8.99□□□□□ -0.97
SNX21-205ENST00000372547 OVOL1O14753 267 aa8.99□□□□□ -0.97
SNX21-205ENST00000372547 EIF4EBP3O60516 100 aaPredicted RBP8.99□□□□□ -0.97
SNX21-205ENST00000372547 IGHV3-33P01772 117 aa8.99□□□□□ -0.97
SNX21-205ENST00000372547 U3KQE9 123 aa8.99□□□□□ -0.97
SNX21-205ENST00000372547 TRAV41A0A0B4J266 112 aa8.98□□□□□ -0.97
SNX21-205ENST00000372547 CENPVL3A0A0U1RRI6 287 aa8.98□□□□□ -0.97
SNX21-205ENST00000372547 LENEPQ9Y5L5 61 aa8.98□□□□□ -0.97
SNX21-205ENST00000372547 NBL1P41271 181 aa8.98□□□□□ -0.97
SNX21-205ENST00000372547 Q8N1Y9 231 aa8.98□□□□□ -0.97
SNX21-205ENST00000372547 SIRPDQ9H106 197 aa8.98□□□□□ -0.97
SNX21-205ENST00000372547 IGHV1-69DA0A0B4J2H0 117 aa8.97□□□□□ -0.97
SNX21-205ENST00000372547 POLR2KP53803 58 aaKnown RBP8.97□□□□□ -0.97
SNX21-205ENST00000372547 SBSPONQ8IVN8 264 aa8.97□□□□□ -0.97
SNX21-205ENST00000372547 SPXQ9BT56 116 aa8.97□□□□□ -0.97
SNX21-205ENST00000372547 TRAV12-2A0A075B6T6 113 aa8.97□□□□□ -0.97
SNX21-205ENST00000372547 EDN2P20800 178 aa8.97□□□□□ -0.97
SNX21-205ENST00000372547 LINC00315P59091 139 aa8.97□□□□□ -0.97
SNX21-205ENST00000372547 LY6EQ16553 131 aa8.97□□□□□ -0.97
SNX21-205ENST00000372547 ZNF876PQ49A33 203 aa8.97□□□□□ -0.97
SNX21-205ENST00000372547 TMEM141Q96I45 108 aa8.97□□□□□ -0.97
SNX21-205ENST00000372547 AMELXQ99217 191 aa8.97□□□□□ -0.97
SNX21-205ENST00000372547 A0A0J9YXV3 536 aa8.96□□□□□ -0.97
SNX21-205ENST00000372547 CCDC179H3BU77 68 aa8.96□□□□□ -0.97
SNX21-205ENST00000372547 RNASE13Q5GAN3 156 aaKnown RBP8.96□□□□□ -0.97
SNX21-205ENST00000372547 NHLRC4P0CG21 123 aaPredicted RBP8.96□□□□□ -0.98
SNX21-205ENST00000372547 BRD3OSQ6XYD6 125 aa8.96□□□□□ -0.98
SNX21-205ENST00000372547 C5orf56Q8N8D9 126 aa8.96□□□□□ -0.98
SNX21-205ENST00000372547 TMEM263Q8WUH6 116 aaKnown RBP8.96□□□□□ -0.98
SNX21-205ENST00000372547 KIF25-AS1Q9Y6Z4 181 aa8.96□□□□□ -0.98
SNX21-205ENST00000372547 VPS13CQ709C8 3753 aa8.96□□□□□ -0.98
SNX21-205ENST00000372547 TRAV8-4A0A0B4J246 113 aa8.95□□□□□ -0.98
SNX21-205ENST00000372547 PF4V1P10720 104 aa8.95□□□□□ -0.98
SNX21-205ENST00000372547 UBE2E1P51965 193 aa8.95□□□□□ -0.98
SNX21-205ENST00000372547 NDUFV3P56181 108 aaKnown RBP8.95□□□□□ -0.98
SNX21-205ENST00000372547 LINC01620Q4KN68 170 aa8.95□□□□□ -0.98
SNX21-205ENST00000372547 CITED1Q99966 193 aa8.95□□□□□ -0.98
SNX21-205ENST00000372547 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.95□□□□□ -0.982e-12■■■□□ 18.6
SNX21-205ENST00000372547 HTN1P15515 57 aa8.95□□□□□ -0.98
SNX21-205ENST00000372547 ATXN8Q156A1 80 aa8.95□□□□□ -0.98
SNX21-205ENST00000372547 Q6ZSV7 163 aa8.95□□□□□ -0.98
SNX21-205ENST00000372547 TIMM17AQ99595 171 aa8.95□□□□□ -0.98
SNX21-205ENST00000372547 RHPN1-AS1Q9BWJ2 59 aa8.95□□□□□ -0.98
SNX21-205ENST00000372547 RHODO00212 210 aa8.94□□□□□ -0.98
SNX21-205ENST00000372547 C15orf53Q8NAA6 179 aa8.94□□□□□ -0.98
SNX21-205ENST00000372547 MDFICQ9P1T7 246 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms