RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 TRAV26-2A0A0B4J265 109 aa7.57□□□□□ -1.2
SCAF11-202ENST00000369367 TRAV4A0A0B4J268 109 aa7.57□□□□□ -1.2
SCAF11-202ENST00000369367 FANCD2OSQ96PS1 177 aa7.57□□□□□ -1.2
SCAF11-202ENST00000369367 SCRT2Q9NQ03 307 aa7.57□□□□□ -1.2
SCAF11-202ENST00000369367 MIFP14174 115 aa7.56□□□□□ -1.2
SCAF11-202ENST00000369367 NDUFA1O15239 70 aa7.56□□□□□ -1.2
SCAF11-202ENST00000369367 TRBV6-1A0A0K0K1D8 114 aa7.56□□□□□ -1.2
SCAF11-202ENST00000369367 RBMY1FQ15415 496 aaKnown RBP7.56□□□□□ -1.2
SCAF11-202ENST00000369367 LINC01545Q5VT33 79 aa7.56□□□□□ -1.2
SCAF11-202ENST00000369367 COL5A1P20908 1838 aaPredicted RBP7.56□□□□□ -1.2
SCAF11-202ENST00000369367 H3BQ85 93 aa7.56□□□□□ -1.2
SCAF11-202ENST00000369367 NPYP01303 97 aa7.56□□□□□ -1.2
SCAF11-202ENST00000369367 CLPSL2Q6UWE3 100 aa7.56□□□□□ -1.2
SCAF11-202ENST00000369367 MRPL52Q86TS9 123 aaKnown RBP7.56□□□□□ -1.2
SCAF11-202ENST00000369367 TRBV20-1A0A075B6N2 111 aa7.56□□□□□ -1.2
SCAF11-202ENST00000369367 ETDCA0A1B0GVM5 59 aa7.56□□□□□ -1.2
SCAF11-202ENST00000369367 SOCS3O14543 225 aa7.55□□□□□ -1.2
SCAF11-202ENST00000369367 C21orf62-AS1Q17RA5 79 aa7.55□□□□□ -1.2
SCAF11-202ENST00000369367 Q8N1Y9 231 aa7.55□□□□□ -1.2
SCAF11-202ENST00000369367 J3QQQ9 107 aa7.55□□□□□ -1.2
SCAF11-202ENST00000369367 DEFB114Q30KQ6 69 aa7.55□□□□□ -1.2
SCAF11-202ENST00000369367 PRR14LQ5THK1 2151 aa7.55□□□□□ -1.2
SCAF11-202ENST00000369367 NDUFA7O95182 113 aa7.55□□□□□ -1.2
SCAF11-202ENST00000369367 RPL18AQ02543 176 aaKnown RBP7.55□□□□□ -1.2
SCAF11-202ENST00000369367 hDV102S1A0JD36 115 aa7.54□□□□□ -1.2
SCAF11-202ENST00000369367 IGHV3-30P01768 117 aa7.54□□□□□ -1.2
SCAF11-202ENST00000369367 IGHV3-33P01772 117 aa7.54□□□□□ -1.2
SCAF11-202ENST00000369367 IGHV3-30-3P0DP02 117 aa7.54□□□□□ -1.2
SCAF11-202ENST00000369367 IGHV3-30-5P0DP03 117 aa7.54□□□□□ -1.2
SCAF11-202ENST00000369367 PRSS47A8MTI9 375 aa7.54□□□□□ -1.2
SCAF11-202ENST00000369367 DEFB125Q8N687 156 aa7.54□□□□□ -1.2
SCAF11-202ENST00000369367 C4orf48Q5BLP8 95 aa7.54□□□□□ -1.2
SCAF11-202ENST00000369367 SUMO4Q6EEV6 95 aa7.54□□□□□ -1.2
SCAF11-202ENST00000369367 A0A1B0GV90 55 aa7.54□□□□□ -1.2
SCAF11-202ENST00000369367 TLN1Q9Y490 2541 aaKnown RBP7.54□□□□□ -1.2
SCAF11-202ENST00000369367 MUC22E2RYF6 1773 aaPredicted RBP7.54□□□□□ -1.2
SCAF11-202ENST00000369367 TRAV8-3A0A0A6YYJ7 113 aa7.53□□□□□ -1.2
SCAF11-202ENST00000369367 CCL25O15444 150 aa7.53□□□□□ -1.2
SCAF11-202ENST00000369367 PATE2Q6UY27 113 aa7.53□□□□□ -1.2
SCAF11-202ENST00000369367 IFITM1P13164 125 aa7.53□□□□□ -1.2
SCAF11-202ENST00000369367 BVES-AS1Q5T3Y7 98 aa7.53□□□□□ -1.2
SCAF11-202ENST00000369367 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.53□□□□□ -1.2
SCAF11-202ENST00000369367 IGKV2-29A2NJV5 120 aaPredicted RBP7.53□□□□□ -1.2
SCAF11-202ENST00000369367 LINC01548A6NM66 108 aa7.53□□□□□ -1.2
SCAF11-202ENST00000369367 ALPK3Q96L96 1907 aa7.52□□□□□ -1.21
SCAF11-202ENST00000369367 COL4A3Q01955 1670 aa7.52□□□□□ -1.21
SCAF11-202ENST00000369367 UNQ9165/PRO28630Q6UXU0 137 aa7.52□□□□□ -1.21
SCAF11-202ENST00000369367 DSCR8Q96T75 97 aa7.52□□□□□ -1.21
SCAF11-202ENST00000369367 MRPL35Q9NZE8 188 aaKnown RBP7.52□□□□□ -1.21
SCAF11-202ENST00000369367 K7EQG2 157 aa7.52□□□□□ -1.21
SCAF11-202ENST00000369367 IGLC2P0DOY2 106 aa7.52□□□□□ -1.21
SCAF11-202ENST00000369367 Q6ZVH6 145 aa7.52□□□□□ -1.21
SCAF11-202ENST00000369367 SPINK8P0C7L1 97 aa7.52□□□□□ -1.21
SCAF11-202ENST00000369367 TNRC6AQ8NDV7 1962 aaKnown RBP7.52□□□□□ -1.21
SCAF11-202ENST00000369367 ABCA2Q9BZC7 2435 aa7.52□□□□□ -1.21
SCAF11-202ENST00000369367 NFE4Q86UQ8 179 aa7.51□□□□□ -1.21
SCAF11-202ENST00000369367 LINC01006Q8NI28 216 aa7.51□□□□□ -1.21
SCAF11-202ENST00000369367 TRAV10A0A0B4J240 114 aa7.51□□□□□ -1.21
SCAF11-202ENST00000369367 KIR2DL5BA0A0G2JN68 375 aa7.51□□□□□ -1.21
SCAF11-202ENST00000369367 KIR2DL5BA0A0G2JPC4 375 aa7.51□□□□□ -1.21
SCAF11-202ENST00000369367 C5orf38Q86SI9 138 aa7.51□□□□□ -1.21
SCAF11-202ENST00000369367 KIR2DL5AQ8N109 375 aa7.51□□□□□ -1.21
SCAF11-202ENST00000369367 KIR2DL5BQ8NHK3 375 aa7.51□□□□□ -1.21
SCAF11-202ENST00000369367 CCDC140Q96MF4 163 aa7.51□□□□□ -1.21
SCAF11-202ENST00000369367 LRP4O75096 1905 aa7.51□□□□□ -1.21
SCAF11-202ENST00000369367 ZFP2Q6ZN57 461 aa7.51□□□□□ -1.21
SCAF11-202ENST00000369367 FAM167A-AS1Q96KT0 104 aa7.51□□□□□ -1.21
SCAF11-202ENST00000369367 DEFB131BA0A096LNP1 70 aa7.51□□□□□ -1.21
SCAF11-202ENST00000369367 LY6LH3BQJ8 138 aa7.51□□□□□ -1.21
SCAF11-202ENST00000369367 IGLL1P15814 213 aa7.51□□□□□ -1.21
SCAF11-202ENST00000369367 FGF6P10767 208 aa7.51□□□□□ -1.21
SCAF11-202ENST00000369367 POLR3KQ9Y2Y1 108 aaPredicted RBP7.51□□□□□ -1.21
SCAF11-202ENST00000369367 VSIG2Q96IQ7 327 aa7.5□□□□□ -1.21
SCAF11-202ENST00000369367 GAGE2EQ4V326 116 aa7.5□□□□□ -1.21
SCAF11-202ENST00000369367 UBL5Q9BZL1 73 aa7.5□□□□□ -1.21
SCAF11-202ENST00000369367 GAGE2DQ9UEU5 116 aa7.5□□□□□ -1.21
SCAF11-202ENST00000369367 TRBV12-3P01733 135 aa7.5□□□□□ -1.21
SCAF11-202ENST00000369367 Q9H8V8 135 aa7.5□□□□□ -1.21
SCAF11-202ENST00000369367 PRRC2AP48634 2157 aaKnown RBP7.5□□□□□ -1.21
SCAF11-202ENST00000369367 KIR3DS1Q14943 382 aa7.5□□□□□ -1.21
SCAF11-202ENST00000369367 C22orf34Q6ZV56 151 aa7.5□□□□□ -1.21
SCAF11-202ENST00000369367 CITED1Q99966 193 aa7.49□□□□□ -1.21
SCAF11-202ENST00000369367 SPANXDQ9BXN6 97 aa7.49□□□□□ -1.21
SCAF11-202ENST00000369367 KLK12Q9UKR0 248 aa7.49□□□□□ -1.21
SCAF11-202ENST00000369367 MYO9AB2RTY4 2548 aa7.49□□□□□ -1.21
SCAF11-202ENST00000369367 UBE2AP49459 152 aa7.49□□□□□ -1.21
SCAF11-202ENST00000369367 HIST2H2BCQ6DN03 193 aa7.49□□□□□ -1.21
SCAF11-202ENST00000369367 PRO1854Q9UHT4 67 aa7.49□□□□□ -1.21
SCAF11-202ENST00000369367 CTRLP40313 264 aa7.49□□□□□ -1.21
SCAF11-202ENST00000369367 HIST1H4AP62805 103 aaKnown RBP7.49□□□□□ -1.21
SCAF11-202ENST00000369367 COX7B2Q8TF08 81 aa7.49□□□□□ -1.21
SCAF11-202ENST00000369367 H7C423 109 aa7.49□□□□□ -1.21
SCAF11-202ENST00000369367 ZNF702PQ9H963 129 aa7.49□□□□□ -1.21
SCAF11-202ENST00000369367 ZFYVE26Q68DK2 2539 aa7.49□□□□□ -1.21
SCAF11-202ENST00000369367 A0A1B0GV72 72 aa7.48□□□□□ -1.21
SCAF11-202ENST00000369367 LYPD6BQ8NI32 183 aa7.48□□□□□ -1.21
SCAF11-202ENST00000369367 IGLV2-14P01704 120 aa7.48□□□□□ -1.21
SCAF11-202ENST00000369367 IGLV10-54A0A075B6I4 117 aa7.48□□□□□ -1.21
SCAF11-202ENST00000369367 SIVA1O15304 175 aa7.48□□□□□ -1.21
SCAF11-202ENST00000369367 SPAG11BQ08648 103 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms