RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 C7orf33Q8WU49 177 aa8.46□□□□□ -1.05
CLIP1-203ENST00000361654 TTC28Q96AY4 2481 aa8.46□□□□□ -1.05
CLIP1-203ENST00000361654 WFDC11Q8NEX6 87 aa8.46□□□□□ -1.06
CLIP1-203ENST00000361654 SONP18583 2426 aaKnown RBP8.46□□□□□ -1.06
CLIP1-203ENST00000361654 IGLC2P0DOY2 106 aa8.46□□□□□ -1.06
CLIP1-203ENST00000361654 IGLC3P0DOY3 106 aa8.46□□□□□ -1.06
CLIP1-203ENST00000361654 SEM1Q6ZVN7 128 aa8.46□□□□□ -1.06
CLIP1-203ENST00000361654 IGHV4-31P0DP07 118 aa8.46□□□□□ -1.06
CLIP1-203ENST00000361654 Q8N1Y9 231 aa8.46□□□□□ -1.06
CLIP1-203ENST00000361654 GTSF1Q8WW33 167 aa8.46□□□□□ -1.06
CLIP1-203ENST00000361654 DEFB131BA0A096LNP1 70 aa8.45□□□□□ -1.06
CLIP1-203ENST00000361654 LYRM9A8MSI8 78 aa8.45□□□□□ -1.06
CLIP1-203ENST00000361654 ZFP2Q6ZN57 461 aa8.45□□□□□ -1.06
CLIP1-203ENST00000361654 ZNF843Q8N446 348 aa8.45□□□□□ -1.06
CLIP1-203ENST00000361654 PLXND1Q9Y4D7 1925 aa8.45□□□□□ -1.06
CLIP1-203ENST00000361654 IGHV4-28A0A0C4DH34 117 aa8.45□□□□□ -1.06
CLIP1-203ENST00000361654 NREPQ16612 68 aa8.45□□□□□ -1.06
CLIP1-203ENST00000361654 TRBV10-1A0A0K0K1A3 114 aa8.44□□□□□ -1.06
CLIP1-203ENST00000361654 BAALC-AS2P0C853 105 aa8.44□□□□□ -1.06
CLIP1-203ENST00000361654 Q6ZVH6 145 aa8.44□□□□□ -1.06
CLIP1-203ENST00000361654 Q8N7P7 452 aa8.44□□□□□ -1.06
CLIP1-203ENST00000361654 KIR2DL5BA0A0G2JN68 375 aa8.44□□□□□ -1.06
CLIP1-203ENST00000361654 KIR2DL5BA0A0G2JPC4 375 aa8.44□□□□□ -1.06
CLIP1-203ENST00000361654 IGKV1-17P01599 117 aa8.44□□□□□ -1.06
CLIP1-203ENST00000361654 KIR2DL5AQ8N109 375 aa8.44□□□□□ -1.06
CLIP1-203ENST00000361654 Q8NA96 180 aa8.44□□□□□ -1.06
CLIP1-203ENST00000361654 GTSF1LQ9H1H1 148 aa8.44□□□□□ -1.06
CLIP1-203ENST00000361654 IGKV2-24A0A0C4DH68 120 aa8.44□□□□□ -1.06
CLIP1-203ENST00000361654 A0A1B0GX51 115 aa8.44□□□□□ -1.06
CLIP1-203ENST00000361654 MED14OSP0DP75 135 aa8.44□□□□□ -1.06
CLIP1-203ENST00000361654 SPRNQ5BIV9 151 aa8.44□□□□□ -1.06
CLIP1-203ENST00000361654 Q6YL49 198 aa8.44□□□□□ -1.06
CLIP1-203ENST00000361654 DIRC1Q969H9 104 aa8.44□□□□□ -1.06
CLIP1-203ENST00000361654 OTOGLQ3ZCN5 2332 aa8.44□□□□□ -1.06
CLIP1-203ENST00000361654 CUL9Q8IWT3 2517 aa8.44□□□□□ -1.06
CLIP1-203ENST00000361654 COX8AP10176 69 aa8.44□□□□□ -1.06
CLIP1-203ENST00000361654 NFE4Q86UQ8 179 aa8.44□□□□□ -1.06
CLIP1-203ENST00000361654 CFC1BP0CG36 223 aa8.43□□□□□ -1.06
CLIP1-203ENST00000361654 CFC1P0CG37 223 aa8.43□□□□□ -1.06
CLIP1-203ENST00000361654 VWA8A3KMH1 1905 aa8.43□□□□□ -1.06
CLIP1-203ENST00000361654 CEND1Q8N111 149 aa8.43□□□□□ -1.06
CLIP1-203ENST00000361654 FGF23Q9GZV9 251 aaPredicted RBP8.43□□□□□ -1.06
CLIP1-203ENST00000361654 CACNA1AO00555 2505 aa8.43□□□□□ -1.06
CLIP1-203ENST00000361654 IGLV1-47P01700 117 aa8.43□□□□□ -1.06
CLIP1-203ENST00000361654 MAP6D1Q9H9H5 199 aa8.43□□□□□ -1.06
CLIP1-203ENST00000361654 SEC61GP60059 68 aa8.43□□□□□ -1.06
CLIP1-203ENST00000361654 LRCOL1A6NCL2 159 aa8.42□□□□□ -1.06
CLIP1-203ENST00000361654 CCL25O15444 150 aa8.42□□□□□ -1.06
CLIP1-203ENST00000361654 SPRY4Q9C004 299 aa8.42□□□□□ -1.06
CLIP1-203ENST00000361654 CRYGDP07320 174 aa8.42□□□□□ -1.06
CLIP1-203ENST00000361654 RNASE8Q8TDE3 154 aaKnown RBP8.42□□□□□ -1.06
CLIP1-203ENST00000361654 TNCP24821 2201 aa8.42□□□□□ -1.06
CLIP1-203ENST00000361654 SIVA1O15304 175 aa8.42□□□□□ -1.06
CLIP1-203ENST00000361654 F8W1H4 67 aa8.41□□□□□ -1.06
CLIP1-203ENST00000361654 ANKRD29Q8N6D5 301 aa8.41□□□□□ -1.06
CLIP1-203ENST00000361654 TRAV10A0A0B4J240 114 aa8.41□□□□□ -1.06
CLIP1-203ENST00000361654 WI2-2373I1.2A0A1W2PRP0 233 aa8.41□□□□□ -1.06
CLIP1-203ENST00000361654 GAGE12HA6NDE8 117 aa8.41□□□□□ -1.06
CLIP1-203ENST00000361654 C9orf118A6NHY6 69 aa8.41□□□□□ -1.06
CLIP1-203ENST00000361654 LINC01548A6NM66 108 aa8.41□□□□□ -1.06
CLIP1-203ENST00000361654 LY6G6DO95868 133 aa8.41□□□□□ -1.06
CLIP1-203ENST00000361654 TMEM258P61165 79 aa8.41□□□□□ -1.06
CLIP1-203ENST00000361654 TRAV26-1A0A087WT03 109 aa8.41□□□□□ -1.06
CLIP1-203ENST00000361654 A0A0J9YX75 114 aa8.41□□□□□ -1.06
CLIP1-203ENST00000361654 LMO4P61968 165 aa8.41□□□□□ -1.06
CLIP1-203ENST00000361654 COA6Q5JTJ3 125 aaKnown RBP8.41□□□□□ -1.06
CLIP1-203ENST00000361654 NLRC5Q86WI3 1866 aa8.41□□□□□ -1.06
CLIP1-203ENST00000361654 A0A0J9YXV3 536 aa8.4□□□□□ -1.06
CLIP1-203ENST00000361654 MIFP14174 115 aa8.4□□□□□ -1.06
CLIP1-203ENST00000361654 RPL39LQ96EH5 51 aaKnown RBP8.4□□□□□ -1.06
CLIP1-203ENST00000361654 IGLL1P15814 213 aa8.4□□□□□ -1.06
CLIP1-203ENST00000361654 TDRG1Q3Y452 100 aa8.4□□□□□ -1.06
CLIP1-203ENST00000361654 ZNF524Q96C55 264 aa8.4□□□□□ -1.06
CLIP1-203ENST00000361654 NCR3O14931 201 aa8.4□□□□□ -1.06
CLIP1-203ENST00000361654 TEX22C9J3V5 150 aa8.4□□□□□ -1.07
CLIP1-203ENST00000361654 A0A087WZ39 114 aa8.4□□□□□ -1.07
CLIP1-203ENST00000361654 NACAE9PAV3 2078 aa8.4□□□□□ -1.07
CLIP1-203ENST00000361654 H0Y9J4 135 aa8.39□□□□□ -1.07
CLIP1-203ENST00000361654 FAM222AQ5U5X8 452 aa8.39□□□□□ -1.07
CLIP1-203ENST00000361654 RITA1Q96K30 269 aa8.39□□□□□ -1.07
CLIP1-203ENST00000361654 DKK2Q9UBU2 259 aa8.39□□□□□ -1.07
CLIP1-203ENST00000361654 PTPN13Q12923 2485 aa8.39□□□□□ -1.07
CLIP1-203ENST00000361654 C19orf84I3L1E1 186 aa8.39□□□□□ -1.07
CLIP1-203ENST00000361654 LGALS9O00182 355 aa8.39□□□□□ -1.07
CLIP1-203ENST00000361654 NUPR1O60356 82 aa8.39□□□□□ -1.07
CLIP1-203ENST00000361654 CRYBA4P53673 196 aa8.39□□□□□ -1.07
CLIP1-203ENST00000361654 HIGD2BQ4VC39 106 aa8.39□□□□□ -1.07
CLIP1-203ENST00000361654 UFSP1Q6NVU6 142 aa8.39□□□□□ -1.07
CLIP1-203ENST00000361654 SPG11Q96JI7 2443 aa8.39□□□□□ -1.07
CLIP1-203ENST00000361654 ACYP1P07311 99 aa8.38□□□□□ -1.07
CLIP1-203ENST00000361654 UBE2D1P51668 147 aa8.38□□□□□ -1.07
CLIP1-203ENST00000361654 HIGD2AQ9BW72 106 aa8.38□□□□□ -1.07
CLIP1-203ENST00000361654 DOCK11Q5JSL3 2073 aa8.38□□□□□ -1.07
CLIP1-203ENST00000361654 KRTAP27-1Q3LI81 207 aa8.38□□□□□ -1.07
CLIP1-203ENST00000361654 A0A1W2PNU3 283 aaPredicted RBP8.37□□□□□ -1.07
CLIP1-203ENST00000361654 ODF3L1Q8IXM7 274 aa8.37□□□□□ -1.07
CLIP1-203ENST00000361654 DOCK9Q9BZ29 2069 aa8.37□□□□□ -1.07
CLIP1-203ENST00000361654 JMJD7-PLA2G4BH0Y9G9 81 aa8.37□□□□□ -1.07
CLIP1-203ENST00000361654 COX7BP24311 80 aa8.37□□□□□ -1.07
CLIP1-203ENST00000361654 GATA1P15976 413 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms