RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 IGKV3D-20A0A0C4DH25 116 aa8.9□□□□□ -0.98
VPS29-201ENST00000360579 TRBV10-1A0A0K0K1A3 114 aa8.9□□□□□ -0.98
VPS29-201ENST00000360579 TMEM262E9PQX1 116 aa8.9□□□□□ -0.98
VPS29-201ENST00000360579 PET100P0DJ07 73 aa8.9□□□□□ -0.98
VPS29-201ENST00000360579 JPT2Q9H910 190 aa8.9□□□□□ -0.98
VPS29-201ENST00000360579 FABP5P3A8MUU1 101 aa8.89□□□□□ -0.99
VPS29-201ENST00000360579 ARL14EPLP0DKL9 152 aa8.89□□□□□ -0.99
VPS29-201ENST00000360579 RAB2AP61019 212 aa8.89□□□□□ -0.99
VPS29-201ENST00000360579 PKIAP61925 76 aa8.89□□□□□ -0.99
VPS29-201ENST00000360579 RPL36AP83881 106 aaKnown RBP8.89□□□□□ -0.99
VPS29-201ENST00000360579 RPL19P84098 196 aaKnown RBP8.89□□□□□ -0.99
VPS29-201ENST00000360579 LCE3BQ5TA77 95 aa8.89□□□□□ -0.99
VPS29-201ENST00000360579 FAM74A4Q5TZK3 123 aa8.89□□□□□ -0.99
VPS29-201ENST00000360579 MZT2BQ6NZ67 158 aa8.89□□□□□ -0.99
VPS29-201ENST00000360579 ENHOQ6UWT2 76 aa8.89□□□□□ -0.99
VPS29-201ENST00000360579 OR11H4Q8NGC9 324 aa8.89□□□□□ -0.99
VPS29-201ENST00000360579 RPL36ALQ969Q0 106 aaKnown RBP8.89□□□□□ -0.99
VPS29-201ENST00000360579 SMIM3Q9BZL3 60 aa8.89□□□□□ -0.99
VPS29-201ENST00000360579 EPDR1Q9UM22 224 aa8.89□□□□□ -0.99
VPS29-201ENST00000360579 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.89□□□□□ -0.99
VPS29-201ENST00000360579 HMGB3O15347 200 aaKnown RBP8.88□□□□□ -0.99
VPS29-201ENST00000360579 HLA-DQA1P01909 254 aa8.88□□□□□ -0.99
VPS29-201ENST00000360579 PRSS1P07477 247 aa8.88□□□□□ -0.99
VPS29-201ENST00000360579 MIAQ16674 131 aa8.88□□□□□ -0.99
VPS29-201ENST00000360579 C15orf54Q8N8G6 183 aa8.88□□□□□ -0.99
VPS29-201ENST00000360579 PPP1R1CQ8WVI7 109 aa8.88□□□□□ -0.99
VPS29-201ENST00000360579 CCDC32Q9BV29 185 aa8.88□□□□□ -0.99
VPS29-201ENST00000360579 DPH3P1Q9H4G8 78 aa8.88□□□□□ -0.99
VPS29-201ENST00000360579 TRBV7-3A0A075B6L6 115 aa8.87□□□□□ -0.99
VPS29-201ENST00000360579 B4DEV8 164 aa8.87□□□□□ -0.99
VPS29-201ENST00000360579 H3BVH4 76 aa8.87□□□□□ -0.99
VPS29-201ENST00000360579 ANGP03950 147 aaKnown RBP8.87□□□□□ -0.99
VPS29-201ENST00000360579 STAG3L2P0CL84 134 aa8.87□□□□□ -0.99
VPS29-201ENST00000360579 STAG3L3P0CL85 134 aa8.87□□□□□ -0.99
VPS29-201ENST00000360579 RPL12P30050 165 aaKnown RBP8.87□□□□□ -0.99
VPS29-201ENST00000360579 CDC34P49427 236 aaPredicted RBP8.87□□□□□ -0.99
VPS29-201ENST00000360579 UBE2D3P61077 147 aa8.87□□□□□ -0.99
VPS29-201ENST00000360579 UBE2D2P62837 147 aa8.87□□□□□ -0.99
VPS29-201ENST00000360579 SUMO1P63165 101 aaKnown RBP8.87□□□□□ -0.99
VPS29-201ENST00000360579 SUN5Q8TC36 379 aa8.87□□□□□ -0.99
VPS29-201ENST00000360579 TRBV6-8A0A0A6YYG3 113 aa8.86□□□□□ -0.99
VPS29-201ENST00000360579 DNLZQ5SXM8 178 aa8.86□□□□□ -0.99
VPS29-201ENST00000360579 SDIM1Q6ZPB5 146 aa8.86□□□□□ -0.99
VPS29-201ENST00000360579 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.86□□□□□ -0.99
VPS29-201ENST00000360579 SFRP2Q96HF1 295 aa8.86□□□□□ -0.99
VPS29-201ENST00000360579 TMEM167BQ9NRX6 74 aa8.86□□□□□ -0.99
VPS29-201ENST00000360579 PHLDA3Q9Y5J5 127 aa8.86□□□□□ -0.99
VPS29-201ENST00000360579 A0A087WWL8 130 aa8.85□□□□□ -0.99
VPS29-201ENST00000360579 MPC2O95563 127 aa8.85□□□□□ -0.99
VPS29-201ENST00000360579 ARMS2P0C7Q2 107 aa8.85□□□□□ -0.99
VPS29-201ENST00000360579 GCHFRP30047 84 aa8.85□□□□□ -0.99
VPS29-201ENST00000360579 CIRBPQ14011 172 aaKnown RBP8.85□□□□□ -0.99
VPS29-201ENST00000360579 MPV17L2Q567V2 206 aa8.85□□□□□ -0.99
VPS29-201ENST00000360579 CLRN3Q8NCR9 226 aa8.85□□□□□ -0.99
VPS29-201ENST00000360579 OR10G8Q8NGN5 311 aa8.85□□□□□ -0.99
VPS29-201ENST00000360579 PANO1I0J062 215 aa8.84□□□□□ -0.99
VPS29-201ENST00000360579 H2BFSP57053 126 aa8.84□□□□□ -0.99
VPS29-201ENST00000360579 RAB24Q969Q5 203 aa8.84□□□□□ -0.99
VPS29-201ENST00000360579 RNF185Q96GF1 192 aa8.84□□□□□ -0.99
VPS29-201ENST00000360579 ARL2-SNX15V9GYD0 113 aa8.84□□□□□ -0.99
VPS29-201ENST00000360579 KRBOX1C9JBD0 128 aa8.83□□□□□ -1
VPS29-201ENST00000360579 TPT1P13693 172 aaKnown RBP8.83□□□□□ -1
VPS29-201ENST00000360579 CNBPP62633 177 aaKnown RBP8.83□□□□□ -1
VPS29-201ENST00000360579 ZFP82Q8N141 532 aa8.83□□□□□ -1
VPS29-201ENST00000360579 ENKURQ8TC29 256 aa8.83□□□□□ -1
VPS29-201ENST00000360579 DPH3Q96FX2 82 aa8.83□□□□□ -1
VPS29-201ENST00000360579 CHCHD5Q9BSY4 110 aa8.83□□□□□ -1
VPS29-201ENST00000360579 WFDC1Q9HC57 220 aa8.83□□□□□ -1
VPS29-201ENST00000360579 A0A1W2PRE2 83 aa8.82□□□□□ -1
VPS29-201ENST00000360579 M0R381 172 aa8.82□□□□□ -1
VPS29-201ENST00000360579 PTTG1O95997 202 aa8.82□□□□□ -1
VPS29-201ENST00000360579 CXorf1O96002 111 aa8.82□□□□□ -1
VPS29-201ENST00000360579 MBP02144 154 aa8.82□□□□□ -1
VPS29-201ENST00000360579 TMEM97Q5BJF2 176 aa8.82□□□□□ -1
VPS29-201ENST00000360579 KRTAP4-12Q9BQ66 201 aa8.82□□□□□ -1
VPS29-201ENST00000360579 PRR34Q9NV39 138 aa8.82□□□□□ -1
VPS29-201ENST00000360579 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.81□□□□□ -1
VPS29-201ENST00000360579 TRAV34A0A0B4J273 112 aa8.81□□□□□ -1
VPS29-201ENST00000360579 M0R036 132 aa8.81□□□□□ -1
VPS29-201ENST00000360579 IGHV3-64A0A075B6Q5 118 aa8.8□□□□□ -1
VPS29-201ENST00000360579 GRIFINA4D1Z8 144 aa8.8□□□□□ -1
VPS29-201ENST00000360579 IFNA7P01567 189 aa8.8□□□□□ -1
VPS29-201ENST00000360579 RAB4BP61018 213 aa8.8□□□□□ -1
VPS29-201ENST00000360579 FAM162BQ5T6X4 162 aa8.8□□□□□ -1
VPS29-201ENST00000360579 Q86TA4 180 aa8.8□□□□□ -1
VPS29-201ENST00000360579 C7orf33Q8WU49 177 aa8.8□□□□□ -1
VPS29-201ENST00000360579 LINC01600Q96MT4 127 aa8.8□□□□□ -1
VPS29-201ENST00000360579 PSMG3Q9BT73 122 aaPredicted RBP8.8□□□□□ -1
VPS29-201ENST00000360579 A0A087WYN8 130 aa8.79□□□□□ -1
VPS29-201ENST00000360579 SH2D1AO60880 128 aa8.79□□□□□ -1
VPS29-201ENST00000360579 SERF2P84101 59 aa8.79□□□□□ -1
VPS29-201ENST00000360579 COX8CQ7Z4L0 72 aa8.79□□□□□ -1
VPS29-201ENST00000360579 LINC00269Q8N2A0 174 aa8.79□□□□□ -1
VPS29-201ENST00000360579 NEXN-AS1Q8NBZ9 246 aa8.79□□□□□ -1
VPS29-201ENST00000360579 ACTR3CQ9C0K3 210 aaPredicted RBP8.79□□□□□ -1
VPS29-201ENST00000360579 AP5S1Q9NUS5 200 aa8.79□□□□□ -1
VPS29-201ENST00000360579 ZFP30Q9Y2G7 519 aa8.79□□□□□ -1
VPS29-201ENST00000360579 hDV102S1A0JD36 115 aa8.78□□□□□ -1
VPS29-201ENST00000360579 INMT-MINDY4F8WBC2 141 aa8.78□□□□□ -1
VPS29-201ENST00000360579 PEX7O00628 323 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 164.2 ms