RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 Q9HAA7 133 aa6.89□□□□□ -1.31
COL6A6-201ENST00000358511 COL4A6Q14031 1691 aa6.89□□□□□ -1.31
COL6A6-201ENST00000358511 NDUFB1O75438 58 aa6.89□□□□□ -1.31
COL6A6-201ENST00000358511 ZNF491Q8N8L2 437 aa6.89□□□□□ -1.31
COL6A6-201ENST00000358511 RPL39LQ96EH5 51 aaKnown RBP6.89□□□□□ -1.31
COL6A6-201ENST00000358511 H3BUX3 64 aa6.89□□□□□ -1.31
COL6A6-201ENST00000358511 WISP1O95388 367 aa6.89□□□□□ -1.31
COL6A6-201ENST00000358511 PIP4P2Q8N4L2 257 aa6.89□□□□□ -1.31
COL6A6-201ENST00000358511 ZNF524Q96C55 264 aa6.89□□□□□ -1.31
COL6A6-201ENST00000358511 CD59P13987 128 aa6.89□□□□□ -1.31
COL6A6-201ENST00000358511 IGHV4-4A0A075B6R2 117 aa6.89□□□□□ -1.31
COL6A6-201ENST00000358511 TEX49A0A1B0GTD5 131 aa6.89□□□□□ -1.31
COL6A6-201ENST00000358511 Q6ZR03 302 aa6.89□□□□□ -1.31
COL6A6-201ENST00000358511 IGKV4-1P06312 121 aa6.88□□□□□ -1.31
COL6A6-201ENST00000358511 FOXE3Q13461 319 aa6.88□□□□□ -1.31
COL6A6-201ENST00000358511 PLA2G1BP04054 148 aaKnown RBP6.88□□□□□ -1.31
COL6A6-201ENST00000358511 C11orf1Q9H5F2 150 aa6.88□□□□□ -1.31
COL6A6-201ENST00000358511 TM2D2Q9BX73 214 aa6.88□□□□□ -1.31
COL6A6-201ENST00000358511 C11orf86A6NJI1 115 aa6.88□□□□□ -1.31
COL6A6-201ENST00000358511 C3orf22Q8N5N4 141 aa6.88□□□□□ -1.31
COL6A6-201ENST00000358511 IGHV3-16A0A0C4DH30 117 aa6.88□□□□□ -1.31
COL6A6-201ENST00000358511 A0A0U1RQV1 116 aa6.88□□□□□ -1.31
COL6A6-201ENST00000358511 CRYGCP07315 174 aa6.88□□□□□ -1.31
COL6A6-201ENST00000358511 IGKV2D-24A0A075B6R9 120 aa6.88□□□□□ -1.31
COL6A6-201ENST00000358511 A0A1B0GXF2 115 aa6.88□□□□□ -1.31
COL6A6-201ENST00000358511 GATA1P15976 413 aaPredicted RBP6.88□□□□□ -1.31
COL6A6-201ENST00000358511 LYPD6Q86Y78 171 aa6.88□□□□□ -1.31
COL6A6-201ENST00000358511 FUSP35637 526 aaKnown RBP eCLIP6.87□□□□□ -1.31
COL6A6-201ENST00000358511 ZNF503Q96F45 646 aa6.87□□□□□ -1.31
COL6A6-201ENST00000358511 LTBP2Q14767 1821 aa6.87□□□□□ -1.31
COL6A6-201ENST00000358511 JMJD7-PLA2G4BH0Y9G9 81 aa6.87□□□□□ -1.31
COL6A6-201ENST00000358511 WFDC11Q8NEX6 87 aa6.87□□□□□ -1.31
COL6A6-201ENST00000358511 CLPSL2Q6UWE3 100 aa6.87□□□□□ -1.31
COL6A6-201ENST00000358511 PTH2Q96A98 100 aa6.87□□□□□ -1.31
COL6A6-201ENST00000358511 IGKV1OR2-108A0A075B7D4 117 aa6.87□□□□□ -1.31
COL6A6-201ENST00000358511 NDUFA7O95182 113 aa6.86□□□□□ -1.31
COL6A6-201ENST00000358511 GPHB5Q86YW7 130 aa6.86□□□□□ -1.31
COL6A6-201ENST00000358511 CLEC2BQ92478 149 aa6.86□□□□□ -1.31
COL6A6-201ENST00000358511 UBE2E1P51965 193 aa6.86□□□□□ -1.31
COL6A6-201ENST00000358511 ZNRF2Q8NHG8 242 aa6.86□□□□□ -1.31
COL6A6-201ENST00000358511 ZFHX2Q9C0A1 2572 aaPredicted RBP6.86□□□□□ -1.31
COL6A6-201ENST00000358511 PKIGQ9Y2B9 76 aa6.86□□□□□ -1.31
COL6A6-201ENST00000358511 IGHV3-38A0A0C4DH36 116 aa6.86□□□□□ -1.31
COL6A6-201ENST00000358511 A0A0G2JNJ9 132 aa6.86□□□□□ -1.31
COL6A6-201ENST00000358511 CLUHP3Q96NS8 147 aa6.86□□□□□ -1.31
COL6A6-201ENST00000358511 Q9UFV3 132 aa6.86□□□□□ -1.31
COL6A6-201ENST00000358511 UBE2AP49459 152 aa6.86□□□□□ -1.31
COL6A6-201ENST00000358511 TIRAPP58753 221 aa6.86□□□□□ -1.31
COL6A6-201ENST00000358511 TTTY13Q9BZ97 58 aa6.86□□□□□ -1.31
COL6A6-201ENST00000358511 SND1-IT1Q9HBX3 110 aa6.86□□□□□ -1.31
COL6A6-201ENST00000358511 ZFYVE26Q68DK2 2539 aa6.86□□□□□ -1.31
COL6A6-201ENST00000358511 PROP1O75360 226 aa6.86□□□□□ -1.31
COL6A6-201ENST00000358511 NXPH4O95158 308 aa6.86□□□□□ -1.31
COL6A6-201ENST00000358511 MPLKIPQ8TAP9 179 aa6.86□□□□□ -1.31
COL6A6-201ENST00000358511 VSIG2Q96IQ7 327 aa6.86□□□□□ -1.31
COL6A6-201ENST00000358511 COL4A3Q01955 1670 aa6.85□□□□□ -1.31
COL6A6-201ENST00000358511 IGHV4OR15-8A0A075B7B6 117 aa6.85□□□□□ -1.31
COL6A6-201ENST00000358511 A0A087WW49 117 aa6.85□□□□□ -1.31
COL6A6-201ENST00000358511 TRBV6-1A0A0K0K1D8 114 aa6.85□□□□□ -1.31
COL6A6-201ENST00000358511 ZNF503-AS2A6NEH8 195 aa6.85□□□□□ -1.31
COL6A6-201ENST00000358511 Q8N1Y9 231 aa6.85□□□□□ -1.31
COL6A6-201ENST00000358511 FRMD6-AS1P0C7T7 363 aa6.85□□□□□ -1.31
COL6A6-201ENST00000358511 DEFB131AP59861 70 aa6.85□□□□□ -1.31
COL6A6-201ENST00000358511 KRTAP27-1Q3LI81 207 aa6.85□□□□□ -1.31
COL6A6-201ENST00000358511 TMEM61Q8N0U2 210 aa6.85□□□□□ -1.31
COL6A6-201ENST00000358511 AGPAT4-IT1Q9H0P7 198 aa6.85□□□□□ -1.31
COL6A6-201ENST00000358511 IGLV2-14P01704 120 aa6.85□□□□□ -1.31
COL6A6-201ENST00000358511 IGHV7-4-1A0A0J9YVY3 117 aa6.84□□□□□ -1.31
COL6A6-201ENST00000358511 C19orf71A6NCJ1 209 aa6.84□□□□□ -1.31
COL6A6-201ENST00000358511 OPRPNQ99935 248 aaPredicted RBP6.84□□□□□ -1.31
COL6A6-201ENST00000358511 NOTCH2Q04721 2471 aa6.84□□□□□ -1.31
COL6A6-201ENST00000358511 DSCR9P59020 149 aa6.84□□□□□ -1.31
COL6A6-201ENST00000358511 BRD3OSQ6XYD6 125 aa6.84□□□□□ -1.31
COL6A6-201ENST00000358511 A0A096LPF7 62 aa6.84□□□□□ -1.31
COL6A6-201ENST00000358511 LRRK2Q5S007 2527 aa6.84□□□□□ -1.31
COL6A6-201ENST00000358511 TMEM256-PLSCR3K7ERE1 68 aa6.84□□□□□ -1.31
COL6A6-201ENST00000358511 PLA2G2AP14555 144 aa6.84□□□□□ -1.31
COL6A6-201ENST00000358511 Q6ZSR3 168 aa6.84□□□□□ -1.31
COL6A6-201ENST00000358511 RNF152Q8N8N0 203 aa6.84□□□□□ -1.31
COL6A6-201ENST00000358511 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.84□□□□□ -1.31
COL6A6-201ENST00000358511 IGKV2-29A2NJV5 120 aaPredicted RBP6.84□□□□□ -1.31
COL6A6-201ENST00000358511 GNRH2O43555 120 aa6.84□□□□□ -1.31
COL6A6-201ENST00000358511 LOXP28300 417 aaPredicted RBP6.84□□□□□ -1.31
COL6A6-201ENST00000358511 APOC4P55056 127 aa6.84□□□□□ -1.31
COL6A6-201ENST00000358511 IMUPQ9GZP8 106 aa6.84□□□□□ -1.31
COL6A6-201ENST00000358511 H0Y9J4 135 aa6.84□□□□□ -1.32
COL6A6-201ENST00000358511 LY6DQ14210 128 aa6.84□□□□□ -1.32
COL6A6-201ENST00000358511 ATP5EP2Q5VTU8 51 aa6.84□□□□□ -1.32
COL6A6-201ENST00000358511 IGHV1-69P01742 117 aa6.84□□□□□ -1.32
COL6A6-201ENST00000358511 HOXB4P17483 251 aaPredicted RBP6.84□□□□□ -1.32
COL6A6-201ENST00000358511 G3V318 75 aa6.83□□□□□ -1.32
COL6A6-201ENST00000358511 FN1P02751 2386 aaKnown RBP6.83□□□□□ -1.32
COL6A6-201ENST00000358511 FAM240AA0A1B0GVK7 77 aa6.83□□□□□ -1.32
COL6A6-201ENST00000358511 IGLV1-44P01699 117 aa6.83□□□□□ -1.32
COL6A6-201ENST00000358511 XCL2Q9UBD3 114 aa6.83□□□□□ -1.32
COL6A6-201ENST00000358511 B4DSR2 109 aa6.83□□□□□ -1.32
COL6A6-201ENST00000358511 ATP5EP56381 51 aaPredicted RBP6.83□□□□□ -1.32
COL6A6-201ENST00000358511 FAM236DA0A1B0GTK5 79 aa6.83□□□□□ -1.32
COL6A6-201ENST00000358511 FAM236CP0DP71 79 aa6.83□□□□□ -1.32
COL6A6-201ENST00000358511 COL8A2P25067 703 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms